Clone RE23942 Report

Search the DGRC for RE23942

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:239
Well:42
Vector:pFlc-1
Associated Gene/TranscriptCG7884-RA
Protein status:RE23942.pep: gold
Preliminary Size:2688
Sequenced Size:3975

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7884 2002-01-01 Sim4 clustering to Release 2
CG7884 2002-03-20 Blastp of sequenced clone
CG7884 2003-01-01 Sim4 clustering to Release 3
CG7884 2008-04-29 Release 5.5 accounting
CG7884 2008-08-15 Release 5.9 accounting
CG7884 2008-12-18 5.12 accounting

Clone Sequence Records

RE23942.complete Sequence

3975 bp (3975 high quality bases) assembled on 2002-03-20

GenBank Submission: AY095529

> RE23942.complete
TCAGTTCGTGGGCGCCTGCGCGCATGTGCAGTTCGAGTTTTCAGTGAGAA
GATATTCAGATAGTCAGATACTCAGCATTCGTTCGTCGGCGGTGTTTTTT
GATTCCGAGATCCAGTCGGCGATATAAAATATATACATATATACATGCGT
ACTCTGCGCTGTGTACAGCATCCCTGGCGATTCGGTGATAAAAGTGAAAT
TTTAAGTGCCCAAAAAGTTGCCAAAATCACAAACAAATTTTTTGTTTCGT
TTTTGTTCGAGTGCCGAGTGTTTAGTTAAACAATCCTCAAGCGAAATTCA
AAGGAATTTCAGGTAGCCAGCGGGTTTACCTGATCTCGCCGGGGATCACA
TCAAGATCAATCGCCGGATAGAGGAGTTCGACCTTCAGCGAGTAGTAGGT
TGATCTATGTTCCACATGTTACCGAGAAATCATCTGTCAGTAATGGCTCT
CCAACGGCGATCGGCGTCTCTGGGTCTGCTCACCTTGATATTGGCCTCCT
CGCTGGCGGCATCCACAGCGCAGGTCTCGGTAAGATCGGGCAGATCTCCA
CTGCCCGCCCAACCGGCGGATCACCTGGTGCCGCCACCACTGCCCGTTCC
CCAGAGACTATCGCACGCCGGTGCGGGTTCTCCAGCGCCTCCTCCATCCT
CTGCACCCGTTGCCGTTCCCGAAGCCGGCTTCATGACCCGCGTGGCCAGG
TGGTTCGGCTTGGCTGGCGGCCAGTCGTCCAAGGATCAGCAGCTGAGTGC
CACCAATTCGTTGAGCTATGCCTATCCGAAACCAGTTTCCGGCTTCGACG
CGGGTGGCAAGCCGTGCAGCCTGTGCAACAAGTATCCTTGGGTGCCAATG
GTGGGCCAGCAGCAGCAGCAGCAGCAGCCGAATCCTCAGCAACTGAACAA
CCAACTGCAACAGCATCACCATCATGCGCAGCAGCTGCAAGTGCAGCAGC
AACAACTGCAGCACATCCCGCAACAGAAGCAGCAACAACCTCACCACATA
CCACAACAGCAGCAACAACTGCAGCATATTCCGCAGCAGCAGCAGCAGCA
GCAACCCGTCCCGCAGCAACACGCAACATGGCAGCTGCAGCAGCCGTTGG
CTCAGGCCTCGCAGCAACGCCAGCGGGCTGTGCAATTCCGTCCCAGCTCC
GGACAGAGTGTCTTCCTGCCCCTGGCGGTGCCACTGCCTCCGCTGTACAA
TGCCCAGCCATTCCGGCCTGTTGTACAACCGCTGGTCAAGGAGAACGTAG
TGGCCCAGTCGGAAGTGAGACCCGTGCCGGTTTCCCTGCCCCTACCAACT
CCTGCTCCGCCAGCCAGCACCTCCAGCTTCGAGATCGTGCAGAGCCACCA
GGTGACGGACTTTGTGACGTCCGTGGAATACCCAGCCACGTTCGTGCAGT
CCCATGCCATCGATCTCGGCTCTAGCGGATCTGCGGCCAGCCAAAGGCCA
AGTCATGAGTTGGCTTTGGAGCAGGAACTTCAGGCGGATATCAGTACGGT
GCGCTACCAGCTGGAGGATCTGAGCAGTGGTCAGGTGCATCAGCATTTGC
CAGCCTCGCAGTTGCTAACGGAGATCGGACATTTCGCTGAAACCACCACG
CAGCCACCGCCGGCGGATAACTATCCAGCGGCCTCGTCGCAACAGCAATT
GGAGCAGGAGCAGGAACAGGAGCAGGAGCAACCCTTCTACTATGCGGAGC
AGTTTCAGGATGAAACCAGCACACTGTTATATAGCACCAGCACGGAGTTG
CCCACCACAACAGCACCGCCACCGCCACCACCGGCGCCGGTCATTGAGCT
GAATAACCATCTGGCTGCAGTGCATCACTCGCACCGTCAGGGAATCGGTA
GGGGCAGGGAAACGCCAAAGCGTCTGCTTGACTCGCCCATCAACCACGCC
CCCTTGGCGGGAGCCGGAGGACGGCCCTTCACCCGCGATCCAGCCGATCT
TAATTTCCGAGTAAGCCAGGTGTACACGCCCACGCAGCCACCAACGCCCA
CGTCCACGTACGGTGCGATCGATGCCAGTGGACAGTTTGCTGGTATGTCA
CCACCGAGTCCGCAGCAGGTGATCATACCCTACACCACCAAGCAGCGACC
ACGGCCCTTCGAGAGCTGGACGCCCTTGAAACAGCACCCTCAACATCAAC
TACACCATCAGCCGAATCACCATCACAATCACCACAACCACCAAAGCAAC
GACCTCGAGGAGGAGCCACACGAGCAGCAGGAATCGAAGCTGGCTACAGC
CACCGTGACGGCGCCACCTAATTCGCGACGCACCACCAAATACCTGACCA
AAATCCTGGCCACCAATCTGAGGGAGTTGCTCAAGCGGGAGAGGGAAACG
AAGCGGCTGCCTGGTCAGGGATTGGGTGTGGACATATCCCGGCTGCAGAA
GAACATCGATGGCTGGACGGAGCAGGAGTACAACTCGCTGTCGCATCGAC
CCAGCACACCCACGATTCGAGGAAGATCCAAGCACATACCGTCCGAGTAT
CTGACCACCACTACCACAACTCCAGCGCCGTTATCGCAGCGCCAGTCGAA
AACCACTCGGGGCGAGGGATTCGAGCTGGGTGGCGCTCCACCCACTGATG
CCGGTGATCTGTCCACTTCCATCAACAATCTGGAGCAACTGCATCTGCTC
GGTGAGCGGGGATCGAAGGGCTTTCAGCCCATCGAAGACAACCGCCTGCA
TTTCGACTACTACGATGCCCAACAGCGACCAAGATCCACGTCGGCCATGA
CCACCATCAGTCCGCCCAGCACCACAACCACCACCAATACACCGCCCACC
ACAACGACAACGGTGGTGACACCACTCTACGTGCGCAGCACTCCGGCGCC
CAAAGAGCTGTGGAAACAGGCCCAGGTGGCCATCCTGCCGCAGACCAACG
AGAAGGTGTACGTGGTTACGCCACAGCCACGGCATCAGGAGCACCACCCG
GCGGAGCATCGGGATCGCCATGTGGCCTCCGCCTCGGCGCCCAGGCCTGT
TTACCAAACGCCAGCGCCGCGGTTTCCACGGATGCGACCAACTCCAGCAG
GCGAAGTGAAGTCGGCCACGCCCACCAGCTCGTCGCAGCTGCGCAACTAT
ACGCCGGACATTTTCGGGCTGATGGGACTGTCCGCCTATGTGCCCGCAGA
GCCCGTGGAGATAATCGACGGAAACTCCAAAGTAAATCGCAACTCACCTC
GTCTAGACATGTAATCGAGCTTCTCTCTTGTCTTCACCACACACTGAACA
CTGATTCATCCACACTGATCCATCCATAAAATTGCACCACCACACACCAT
GCACAACCCATCAACAAACACGCACCACCACCCACCACCCGCCATACATC
GCACACCGCAGGTCAACACGATAGTGACAGCAGCGCCGACGGCGGCGGCA
CTTCAGCGACCCACAGCGAGGCCCACGATGTCCCCCTCGCCCAGATAGAG
GTCGAAGCAAGGTCAAGGCGCCCGGAGCCGCACAGCCCCCCATCCTGTTG
TAATATATTTCACCCCAGCCGCCCCTCCAGGCCCCCCGATCGCAATGTGG
AGCGAGGATACGGCCTAGATATAGAGCAAAGTCCTTGGAAGCGCTATGAC
GATGAGTGGAGATCCCGAATCAAAGTTAGAGTATTTTCGCATTTGGTAGC
TTTATGAACAAATGAGGAGGATCAGAGAACCAAAGGAGTGGAGCTACGCG
TAGTATATATATATATTTGAAAAAGGATTTGTATTCACAATTCTCTTTTT
TGCTTTTTTTTTTTTTTAGTAACCTCTGTGTTTTTTTCGTTCTGGCTCTT
CCTTTGCTAGTTGTAGTTCTATGTATAAAATACCTATTATATCTATTTCA
ATCTATCCGAAGAATGGGTTGTCAGGCGATTGACAACGTTATAATCGATG
TGCAACCAAAATATAGCAAATATGAACAAACAAACGATCGAATAAAATTA
AACCAAGCCAAAAAAAAAAAAAAAA

RE23942.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:20:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG7884-RA 4005 CG7884-RA 1..3958 1..3958 19790 100 Plus
CG7884.a 3860 CG7884.a 1..3180 1..3183 15845 99.9 Plus
CG7884.a 3860 CG7884.a 3179..3775 3362..3958 2985 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:06:20
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 19121192..19123788 445..3047 12725 99.3 Plus
chrX 22417052 chrX 19123916..19124828 3046..3958 4550 99.9 Plus
chrX 22417052 chrX 19109552..19109997 1..446 2230 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:43:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:06:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19232268..19234870 445..3047 13015 100 Plus
X 23542271 X 19234998..19235910 3046..3958 4565 100 Plus
X 23542271 X 19220624..19221069 1..446 2230 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:49:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 19240366..19242968 445..3047 13015 100 Plus
X 23527363 X 19243096..19244008 3046..3958 4565 100 Plus
X 23527363 X 19228722..19229167 1..446 2230 100 Plus
Blast to na_te.dros performed 2019-03-16 21:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3240..3391 860..1008 238 65.4 Plus
Doc3-element 4740 Doc3-element DOC3 4740bp 513..645 866..995 153 59.4 Plus
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 4589..4641 2127..2179 130 71.7 Plus
Dtei\I-element 5386 Dtei\I-element DTEII 5386bp 1160..1257 980..1079 125 61 Plus

RE23942.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:07:15 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 19109552..19109996 1..445 100 -> Plus
chrX 19121193..19121648 446..901 95 == Plus
chrX 19121797..19122872 1056..2131 96 == Plus
chrX 19122935..19123788 2194..3047 99 -> Plus
chrX 19123918..19124828 3048..3959 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:21:37 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
CG7884-RA 1..2808 407..3214 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:26:26 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
CG7884-RA 1..2808 407..3214 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:32:30 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
CG7884-RA 1..2808 407..3214 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:01:37 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
CG7884-RA 1..2808 407..3214 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:05:30 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
CG7884-RA 1..2808 407..3214 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:21:36 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
CG7884-RA 1..3958 1..3959 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:26:26 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
CG7884-RA 1..3958 1..3959 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:32:30 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
CG7884-RA 3..3960 1..3958 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:01:37 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
CG7884-RA 1..3958 1..3959 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:05:30 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
CG7884-RA 3..3960 1..3958 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:07:15 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
X 19220624..19221068 1..445 100 -> Plus
X 19232269..19234870 446..3047 100 -> Plus
X 19235000..19235910 3048..3959 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:07:15 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
X 19220624..19221068 1..445 100 -> Plus
X 19232269..19234870 446..3047 100 -> Plus
X 19235000..19235910 3048..3959 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:07:15 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
X 19220624..19221068 1..445 100 -> Plus
X 19232269..19234870 446..3047 100 -> Plus
X 19235000..19235910 3048..3959 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:32:30 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19114657..19115101 1..445 100 -> Plus
arm_X 19126302..19128903 446..3047 100 -> Plus
arm_X 19129033..19129943 3048..3959 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:34:48 Download gff for RE23942.complete
Subject Subject Range Query Range Percent Splice Strand
X 19243098..19244008 3048..3959 99   Plus
X 19228722..19229166 1..445 100 -> Plus
X 19240367..19242968 446..3047 100 -> Plus

RE23942.pep Sequence

Translation from 406 to 3213

> RE23942.pep
MFHMLPRNHLSVMALQRRSASLGLLTLILASSLAASTAQVSVRSGRSPLP
AQPADHLVPPPLPVPQRLSHAGAGSPAPPPSSAPVAVPEAGFMTRVARWF
GLAGGQSSKDQQLSATNSLSYAYPKPVSGFDAGGKPCSLCNKYPWVPMVG
QQQQQQQPNPQQLNNQLQQHHHHAQQLQVQQQQLQHIPQQKQQQPHHIPQ
QQQQLQHIPQQQQQQQPVPQQHATWQLQQPLAQASQQRQRAVQFRPSSGQ
SVFLPLAVPLPPLYNAQPFRPVVQPLVKENVVAQSEVRPVPVSLPLPTPA
PPASTSSFEIVQSHQVTDFVTSVEYPATFVQSHAIDLGSSGSAASQRPSH
ELALEQELQADISTVRYQLEDLSSGQVHQHLPASQLLTEIGHFAETTTQP
PPADNYPAASSQQQLEQEQEQEQEQPFYYAEQFQDETSTLLYSTSTELPT
TTAPPPPPPAPVIELNNHLAAVHHSHRQGIGRGRETPKRLLDSPINHAPL
AGAGGRPFTRDPADLNFRVSQVYTPTQPPTPTSTYGAIDASGQFAGMSPP
SPQQVIIPYTTKQRPRPFESWTPLKQHPQHQLHHQPNHHHNHHNHQSNDL
EEEPHEQQESKLATATVTAPPNSRRTTKYLTKILATNLRELLKRERETKR
LPGQGLGVDISRLQKNIDGWTEQEYNSLSHRPSTPTIRGRSKHIPSEYLT
TTTTTPAPLSQRQSKTTRGEGFELGGAPPTDAGDLSTSINNLEQLHLLGE
RGSKGFQPIEDNRLHFDYYDAQQRPRSTSAMTTISPPSTTTTTNTPPTTT
TTVVTPLYVRSTPAPKELWKQAQVAILPQTNEKVYVVTPQPRHQEHHPAE
HRDRHVASASAPRPVYQTPAPRFPRMRPTPAGEVKSATPTSSSQLRNYTP
DIFGLMGLSAYVPAEPVEIIDGNSKVNRNSPRLDM*

RE23942.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:54:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15945-PA 1026 GF15945-PA 168..307 29..150 332 58.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:54:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19217-PA 933 GG19217-PA 210..933 222..935 2977 93.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:54:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12286-PA 873 GH12286-PA 142..873 224..935 1805 60.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:22:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG7884-PA 935 CG7884-PA 1..935 1..935 4934 100 Plus
CG7884-PB 952 CG7884-PB 1..926 1..927 4876 99.9 Plus
CG44085-PP 2246 CG44085-PP 210..759 41..602 216 25.5 Plus
CG43347-PD 2652 CG43347-PD 1470..1603 110..243 214 45.3 Plus
CG43347-PB 2666 CG43347-PB 1484..1617 110..243 214 45.3 Plus
CG43347-PC 2684 CG43347-PC 1502..1635 110..243 214 45.3 Plus
Ptip-PA 2294 CG32133-PA 894..1405 151..646 211 22.9 Plus
CG44085-PM 864 CG44085-PM 183..673 59..533 201 26.8 Plus
CG44085-PO 2381 CG44085-PO 183..673 59..533 201 26.8 Plus
Ptip-PA 2294 CG32133-PA 315..791 146..644 196 24.6 Plus
CG44085-PF 902 CG44085-PF 237..711 41..533 193 26.5 Plus
CG44085-PK 979 CG44085-PK 314..788 41..533 193 26.5 Plus
CG44085-PJ 979 CG44085-PJ 314..788 41..533 193 26.5 Plus
CG44085-PN 1007 CG44085-PN 314..800 41..534 193 26.5 Plus
Atx2-PD 1023 CG5166-PD 561..1023 151..608 193 24.6 Plus
Atx2-PC 1023 CG5166-PC 561..1023 151..608 193 24.6 Plus
Atx2-PB 1084 CG5166-PB 622..1084 151..608 193 24.6 Plus
CG44085-PH 756 CG44085-PH 237..737 41..544 192 26.5 Plus
CG44085-PL 833 CG44085-PL 314..814 41..544 192 26.5 Plus
CG44085-PI 833 CG44085-PI 314..814 41..544 192 26.5 Plus
CG44085-PC 836 CG44085-PC 314..694 41..434 192 27.4 Plus
CG44085-PD 918 CG44085-PD 237..617 41..434 192 27.4 Plus
CG44085-PG 942 CG44085-PG 237..617 41..434 192 27.4 Plus
CG6026-PB 1555 CG6026-PB 413..759 151..531 190 26.2 Plus
Pdp1-PJ 633 CG17888-PJ 70..218 102..243 189 40.9 Plus
Pdp1-PD 647 CG17888-PD 70..218 102..243 189 40.9 Plus
CG12964-PB 1129 CG12964-PB 334..635 109..425 188 26.9 Plus
CG12964-PC 1129 CG12964-PC 334..635 109..425 188 26.9 Plus
Smr-PF 3601 CG4013-PF 194..259 151..222 187 58.3 Plus
Smr-PE 3601 CG4013-PE 194..259 151..222 187 58.3 Plus
Smr-PD 3601 CG4013-PD 194..259 151..222 187 58.3 Plus
Smr-PG 3607 CG4013-PG 200..265 151..222 187 58.3 Plus
velo-PC 1833 CG10107-PC 82..555 151..609 186 23.7 Plus
velo-PA 1833 CG10107-PA 82..555 151..609 186 23.7 Plus
Wnk-PO 2243 CG7177-PO 884..1181 151..464 186 27.3 Plus
Wnk-PN 2441 CG7177-PN 1082..1379 151..464 186 27.3 Plus
Wnk-PL 2441 CG7177-PL 1082..1379 151..464 186 27.3 Plus
Wnk-PM 2462 CG7177-PM 1082..1379 151..464 186 27.3 Plus
Atx2-PA 888 CG5166-PA 561..755 151..313 183 34.8 Plus
btd-PA 644 CG12653-PA 6..206 137..353 181 32 Plus
shn-PE 2532 CG7734-PE 508..1035 33..555 181 25.2 Plus
shn-PC 2532 CG7734-PC 508..1035 33..555 181 25.2 Plus
shn-PB 2532 CG7734-PB 508..1035 33..555 181 25.2 Plus
shn-PA 2532 CG7734-PA 508..1035 33..555 181 25.2 Plus
shn-PD 2577 CG7734-PD 553..1080 33..555 181 25.2 Plus
shn-PF 2587 CG7734-PF 553..1080 33..555 181 25.2 Plus
kis-PF 5191 CG3696-PF 207..905 39..755 180 21.8 Plus
kis-PE 5252 CG3696-PE 207..905 39..755 180 21.8 Plus
kis-PA 5322 CG3696-PA 207..905 39..755 180 21.8 Plus
kis-PD 5343 CG3696-PD 207..905 39..755 180 21.8 Plus
kis-PC 5517 CG3696-PC 207..905 39..755 180 21.8 Plus
NUCB1-PA 569 CG32190-PA 401..551 108..267 174 36.2 Plus
Ptip-PA 2294 CG32133-PA 193..493 149..482 171 24.9 Plus
Ptip-PA 2294 CG32133-PA 822..1079 147..438 169 27.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:54:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10983-PA 931 GI10983-PA 59..134 66..150 282 64 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:54:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12985-PA 907 GL12985-PA 1..160 4..150 400 59.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:54:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23096-PA 757 GA23096-PA 401..757 602..935 1153 77.8 Plus
Dpse\GA23096-PA 757 GA23096-PA 3..147 10..145 350 57.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:54:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22952-PA 929 GM22952-PA 215..929 223..935 3001 97.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:54:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17436-PA 927 GD17436-PA 213..927 223..935 2915 97.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:54:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19448-PA 888 GJ19448-PA 149..888 208..935 1665 57.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:54:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20063-PA 932 GK20063-PA 78..932 50..935 1969 56.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:54:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15835-PA 931 GE15835-PA 223..931 223..935 2827 91.9 Plus

RE23942.hyp Sequence

Translation from 406 to 3213

> RE23942.hyp
MFHMLPRNHLSVMALQRRSASLGLLTLILASSLAASTAQVSVRSGRSPLP
AQPADHLVPPPLPVPQRLSHAGAGSPAPPPSSAPVAVPEAGFMTRVARWF
GLAGGQSSKDQQLSATNSLSYAYPKPVSGFDAGGKPCSLCNKYPWVPMVG
QQQQQQQPNPQQLNNQLQQHHHHAQQLQVQQQQLQHIPQQKQQQPHHIPQ
QQQQLQHIPQQQQQQQPVPQQHATWQLQQPLAQASQQRQRAVQFRPSSGQ
SVFLPLAVPLPPLYNAQPFRPVVQPLVKENVVAQSEVRPVPVSLPLPTPA
PPASTSSFEIVQSHQVTDFVTSVEYPATFVQSHAIDLGSSGSAASQRPSH
ELALEQELQADISTVRYQLEDLSSGQVHQHLPASQLLTEIGHFAETTTQP
PPADNYPAASSQQQLEQEQEQEQEQPFYYAEQFQDETSTLLYSTSTELPT
TTAPPPPPPAPVIELNNHLAAVHHSHRQGIGRGRETPKRLLDSPINHAPL
AGAGGRPFTRDPADLNFRVSQVYTPTQPPTPTSTYGAIDASGQFAGMSPP
SPQQVIIPYTTKQRPRPFESWTPLKQHPQHQLHHQPNHHHNHHNHQSNDL
EEEPHEQQESKLATATVTAPPNSRRTTKYLTKILATNLRELLKRERETKR
LPGQGLGVDISRLQKNIDGWTEQEYNSLSHRPSTPTIRGRSKHIPSEYLT
TTTTTPAPLSQRQSKTTRGEGFELGGAPPTDAGDLSTSINNLEQLHLLGE
RGSKGFQPIEDNRLHFDYYDAQQRPRSTSAMTTISPPSTTTTTNTPPTTT
TTVVTPLYVRSTPAPKELWKQAQVAILPQTNEKVYVVTPQPRHQEHHPAE
HRDRHVASASAPRPVYQTPAPRFPRMRPTPAGEVKSATPTSSSQLRNYTP
DIFGLMGLSAYVPAEPVEIIDGNSKVNRNSPRLDM*

RE23942.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG7884-PA 935 CG7884-PA 1..935 1..935 4934 100 Plus
CG7884-PB 952 CG7884-PB 1..926 1..927 4876 99.9 Plus
CG44085-PP 2246 CG44085-PP 210..759 41..602 216 25.5 Plus
CG43347-PD 2652 CG43347-PD 1470..1603 110..243 214 45.3 Plus
CG43347-PB 2666 CG43347-PB 1484..1617 110..243 214 45.3 Plus