Clone RE24423 Report

Search the DGRC for RE24423

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:244
Well:23
Vector:pFlc-1
Associated Gene/TranscriptCG4576-RA
Protein status:RE24423.pep: gold
Preliminary Size:2581
Sequenced Size:2451

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4576 2001-12-14 Blastp of sequenced clone
CG4576 2002-01-01 Sim4 clustering to Release 2
CG4576 2003-01-01 Sim4 clustering to Release 3
CG4576 2008-04-29 Release 5.5 accounting
CG4576 2008-08-15 Release 5.9 accounting
CG4576 2008-12-18 5.12 accounting

Clone Sequence Records

RE24423.complete Sequence

2451 bp (2451 high quality bases) assembled on 2001-12-14

GenBank Submission: AY071200

> RE24423.complete
AGGGGCCCTAGACGCACGCATCTGTTCGGACCGCATTTCATTCTCGGCTC
GCACGTTGGCGCAAACGGTTCATTAGCTGGCGGATCAATTCCATTCGGTC
GGGTTTCGATTGGGTTTTGGGCCAAAAGTGCATTTCCTAACATCGGCATT
GGCCGGACAGCAGAAGCCCCTGGGTCTGGTCATCTGCTTTGTTTTTTTGC
TTCATTTACCTCGAGTCGCGTCGGTTGATGAAATTCCGCTTCTTATTGTT
ATTGGTGCGCTGGCGTTGCATTCGATTGGAGTTCGAGTGACGAAAGTGCC
AAGAGTCGAAGACAATCAATTAGAGGGTGCATTACAATCGGCGATTCGAT
GCATCCCATGACGATGATGATGCTTCACATCGTGATTTTAGCAGCCACTT
TTACGGCTGCGCAGTGTTTTCAATTGAACATGACGCAGTTCTATGAGATG
CCTCCTCTATACGACTTGGATGACTATGATCGTTGCCTCCAGGAATTGAA
TGGCCAGGCGTCCACTTACTGCTTCGTCCGCGCGGAAGTCCAGCCCGATG
AGTCTGTAGCGGCATGGCGGGCAATTGCAGAGATTTCGCAGTACGATCGC
CATCACTTCGATCACCGACAGCTCTATTTCGGTCTCTGCCTGCGCGAATG
TGAGGCGTCTCTGGCCGGGTTGAATAAAAGCGAACTGGAGGCCCTGCAAG
CCGGCCTGCTATCGGAAAATGCAAAGGTGAACGTATATCTGGACTTGTTC
TCGATGGAAGCCAATAACCGCCAACGGCACCAGCGCTTGACAAATGCCTG
CCTGAACTGGCGTCTGCAGCGTCGTGGATTCGGGGTGCTGGCCAAGAGCG
TGGTGGAGTACTGCGATGAGGCGGGACATCAAGTGGAAGATGATGCGTGG
AACCTGACCTTCTACGGAATCTTGGGCACTCTACTGGTTCTGGCTTGTCT
GGGTAGCTTAGTGGATCTGCATCTAAAGCGAAGCCGTCATGATAAAATGC
TCAAGGAGCGAGATCACTACAAGACACCGCCCAAGAGCACTGCCCAACAG
GTGCTGCTCACCTTTTCGGTGGCCCGCAATTGGTACCGACTTAATCAGGA
GCCAAGTGGTAAGATCGGTCGCGAGCTGAGATTTCTCGACTGCTTCAAGT
TCTTTGCCATGTTCATGGTGATATTTGCGCACACCAACTGGGTGATTTAC
GAGAGCGCCATCAGCAATCCGCAGGATCCGGAGCGACTGCTTCACACGGC
AGCTGGCACTTTACTCGTTTCGGGATCATTGATCACTGTGACCTTTTTTG
TGATCAGTGGTTTGTTGCTTACCATTAACTGGCTGGCCGTTTCACGTTCG
CTAGAATCTAAAAAGGACACCTGGAGCTTCGGCCAGTATGCTTTGCTATT
TGTCAAGTTTAACATCTTCCGATACATCCGACTGACGGTTCCATATGCCT
TTGTATTGCTCATGAGTGGCGTTTACTTTGAGAACGCTGGAGGTCCACTG
TGGCGGCACATCTTTGAGCGGGAGCAGTTGGCTTGTCGACGCAACTGGTG
GACCAATCTGCTCTACGTCAACAACTTTGTACGCACGGATGAGCGGTGCC
TGCTCCAAGGTTGGTATTTGGCAGCGGATACTCATTCCTTTGTGCTCAGC
TTGGTGCTGCTGATGCTGGGTCACCGGTTCGTCAGATGGAGCAAACAGCT
CTATGCGGGCATTTTGGGTCTTTTTGTGGTGGTGCCAATGGTGCTCACAT
ATGCCATGAACTACTATCCCATTTTTGTACCCACGCCACAAACCCAGAAG
GATTCCTTTATCGGAGATCGTCAATTCACCGAATTCTACACGTCGTCCTT
TATGAACTTCGGTAGCTATTTCTGTGGAGTCCTGGCCGCTTTGGTTTACG
ATCAGTTGGCATTGAAGCAATACAAACTACGGGAGTTAAAGAGCTTCCAG
CTTCTTTGGTTTACACTTATTCCAGTGGGGATTCTATGGCTGTTTAGTGC
TCATCCCATCTTCCAGCACTACTACGTGACGCCGTCGGCCATTTGGGGAG
CATTATATGCCGGCCTGCAGCGAAACATCTGGGGCTTCGGGCTGGGAATC
TTCATCGTGGGCATGGCCAGCAAAGTGGGATGGATTTTCCGTAAGTTCTG
CTGCTTGCCCATTTTCCGCATTTTGGGACGCCTCACTTATGGAGCCTTTA
TCGTCCACCTTCTTGTGGCGAGAATCGTCTTGGCCACAGTGCGGGAGCCC
ATTTATTTTGGCACGGGCATGATGTTTGCTTTCATCTTTTTTACGGTGAC
CGTGTCCTATCTCTGCTCCTTCTTGCTGGCCATCTTTCTGGAGCTTCCCG
TCTCCTCCTTCCTCAAGCTTATGAGGTAGCCCAATGTCCTAACTTAAAGA
TTACTTATAACTAGAATAAAAGACATAACTTAACTAAAAAAAAAAAAAAA
A

RE24423.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:45:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG4576-RA 2725 CG4576-RA 282..2716 4..2438 12160 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:06:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 11653116..11653820 892..1596 3495 99.7 Plus
chr3R 27901430 chr3R 11650347..11650773 4..430 2135 100 Plus
chr3R 27901430 chr3R 11654143..11654484 1791..2132 1710 100 Plus
chr3R 27901430 chr3R 11651696..11651993 431..728 1490 100 Plus
chr3R 27901430 chr3R 11653884..11654078 1596..1790 975 100 Plus
chr3R 27901430 chr3R 11652821..11652988 725..892 840 100 Plus
chr3R 27901430 chr3R 11654759..11654918 2274..2433 800 100 Plus
chr3R 27901430 chr3R 11654546..11654688 2132..2274 715 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:43:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:06:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15828521..15829225 892..1596 3525 100 Plus
3R 32079331 3R 15825752..15826178 4..430 2135 100 Plus
3R 32079331 3R 15829548..15829889 1791..2132 1710 100 Plus
3R 32079331 3R 15827101..15827398 431..728 1490 100 Plus
3R 32079331 3R 15829289..15829483 1596..1790 975 100 Plus
3R 32079331 3R 15828226..15828393 725..892 840 100 Plus
3R 32079331 3R 15830164..15830328 2274..2438 810 99.4 Plus
3R 32079331 3R 15829951..15830093 2132..2274 715 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:12:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 15569352..15570056 892..1596 3525 100 Plus
3R 31820162 3R 15566583..15567009 4..430 2135 100 Plus
3R 31820162 3R 15570379..15570720 1791..2132 1710 100 Plus
3R 31820162 3R 15567932..15568229 431..728 1490 100 Plus
3R 31820162 3R 15570120..15570314 1596..1790 975 100 Plus
3R 31820162 3R 15569057..15569224 725..892 840 100 Plus
3R 31820162 3R 15570995..15571159 2274..2438 810 99.3 Plus
3R 31820162 3R 15570782..15570924 2132..2274 715 100 Plus
Blast to na_te.dros performed on 2019-03-15 14:06:48 has no hits.

RE24423.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:07:32 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 11650344..11650773 1..430 99 -> Plus
chr3R 11651696..11651991 431..726 100 -> Plus
chr3R 11652823..11652988 727..892 100 -> Plus
chr3R 11653117..11653820 893..1596 99 -> Plus
chr3R 11653885..11654078 1597..1790 100 -> Plus
chr3R 11654143..11654483 1791..2131 100 -> Plus
chr3R 11654546..11654688 2132..2274 100 -> Plus
chr3R 11654760..11654919 2275..2435 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:03:58 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
CG4576-RA 1..2031 349..2379 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:13:08 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
CG4576-RA 1..2031 349..2379 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:19:00 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
CG4576-RA 1..2031 349..2379 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:37:17 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
CG4576-RA 1..2031 349..2379 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:50:52 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
CG4576-RA 1..2031 349..2379 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:44:17 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
CG4576-RA 1..2432 1..2432 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:13:08 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
CG4576-RA 1..2432 1..2432 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:19:00 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
CG4576-RA 3..2433 1..2431 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:37:17 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
CG4576-RA 1..2432 1..2432 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:50:52 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
CG4576-RA 3..2433 1..2431 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:32 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15825749..15826178 1..430 99 -> Plus
3R 15827101..15827396 431..726 100 -> Plus
3R 15828228..15828393 727..892 100 -> Plus
3R 15828522..15829225 893..1596 100 -> Plus
3R 15829290..15829483 1597..1790 100 -> Plus
3R 15829548..15829888 1791..2131 100 -> Plus
3R 15829951..15830093 2132..2274 100 -> Plus
3R 15830165..15830324 2275..2435 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:32 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15825749..15826178 1..430 99 -> Plus
3R 15827101..15827396 431..726 100 -> Plus
3R 15828228..15828393 727..892 100 -> Plus
3R 15828522..15829225 893..1596 100 -> Plus
3R 15829290..15829483 1597..1790 100 -> Plus
3R 15829548..15829888 1791..2131 100 -> Plus
3R 15829951..15830093 2132..2274 100 -> Plus
3R 15830165..15830324 2275..2435 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:32 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15825749..15826178 1..430 99 -> Plus
3R 15827101..15827396 431..726 100 -> Plus
3R 15828228..15828393 727..892 100 -> Plus
3R 15828522..15829225 893..1596 100 -> Plus
3R 15829290..15829483 1597..1790 100 -> Plus
3R 15829548..15829888 1791..2131 100 -> Plus
3R 15829951..15830093 2132..2274 100 -> Plus
3R 15830165..15830324 2275..2435 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:19:00 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11651471..11651900 1..430 99 -> Plus
arm_3R 11652823..11653118 431..726 100 -> Plus
arm_3R 11653950..11654115 727..892 100 -> Plus
arm_3R 11654244..11654947 893..1596 100 -> Plus
arm_3R 11655012..11655205 1597..1790 100 -> Plus
arm_3R 11655270..11655610 1791..2131 100 -> Plus
arm_3R 11655673..11655815 2132..2274 100 -> Plus
arm_3R 11655887..11656046 2275..2435 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:14:55 Download gff for RE24423.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15569059..15569224 727..892 100 -> Plus
3R 15566580..15567009 1..430 99 -> Plus
3R 15567932..15568227 431..726 100 -> Plus
3R 15569353..15570056 893..1596 100 -> Plus
3R 15570121..15570314 1597..1790 100 -> Plus
3R 15570379..15570719 1791..2131 100 -> Plus
3R 15570782..15570924 2132..2274 100 -> Plus
3R 15570996..15571155 2275..2435 99   Plus

RE24423.pep Sequence

Translation from 348 to 2378

> RE24423.pep
MHPMTMMMLHIVILAATFTAAQCFQLNMTQFYEMPPLYDLDDYDRCLQEL
NGQASTYCFVRAEVQPDESVAAWRAIAEISQYDRHHFDHRQLYFGLCLRE
CEASLAGLNKSELEALQAGLLSENAKVNVYLDLFSMEANNRQRHQRLTNA
CLNWRLQRRGFGVLAKSVVEYCDEAGHQVEDDAWNLTFYGILGTLLVLAC
LGSLVDLHLKRSRHDKMLKERDHYKTPPKSTAQQVLLTFSVARNWYRLNQ
EPSGKIGRELRFLDCFKFFAMFMVIFAHTNWVIYESAISNPQDPERLLHT
AAGTLLVSGSLITVTFFVISGLLLTINWLAVSRSLESKKDTWSFGQYALL
FVKFNIFRYIRLTVPYAFVLLMSGVYFENAGGPLWRHIFEREQLACRRNW
WTNLLYVNNFVRTDERCLLQGWYLAADTHSFVLSLVLLMLGHRFVRWSKQ
LYAGILGLFVVVPMVLTYAMNYYPIFVPTPQTQKDSFIGDRQFTEFYTSS
FMNFGSYFCGVLAALVYDQLALKQYKLRELKSFQLLWFTLIPVGILWLFS
AHPIFQHYYVTPSAIWGALYAGLQRNIWGFGLGIFIVGMASKVGWIFRKF
CCLPIFRILGRLTYGAFIVHLLVARIVLATVREPIYFGTGMMFAFIFFTV
TVSYLCSFLLAIFLELPVSSFLKLMR*

RE24423.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:20:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18545-PA 670 GF18545-PA 1..670 7..676 3300 90 Plus
Dana\GF11764-PA 662 GF11764-PA 8..626 21..675 782 30 Plus
Dana\GF21322-PA 859 GF21322-PA 404..850 210..675 300 24.3 Plus
Dana\GF22420-PA 748 GF22420-PA 247..647 222..639 259 25.5 Plus
Dana\GF11139-PA 734 GF11139-PA 303..724 233..675 242 24.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:20:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16956-PA 674 GG16956-PA 1..674 1..676 3519 96.9 Plus
Dere\GG10791-PA 647 GG10791-PA 1..630 34..676 781 30.9 Plus
Dere\GG17758-PA 854 GG17758-PA 399..845 210..675 300 24.3 Plus
Dere\GG20531-PA 735 GG20531-PA 249..727 186..675 240 24.2 Plus
Dere\GG18965-PA 746 GG18965-PA 247..646 222..638 235 23.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:20:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19294-PA 689 GH19294-PA 1..689 1..676 2704 71.3 Plus
Dgri\GH19863-PA 569 GH19863-PA 1..562 34..594 667 32.6 Plus
Dgri\GH24844-PA 909 GH24844-PA 465..900 223..675 298 24.5 Plus
Dgri\GH12925-PA 750 GH12925-PA 253..653 222..639 246 24.6 Plus
Dgri\GH24696-PA 1034 GH24696-PA 716..1030 315..674 221 26.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG4576-PA 676 CG4576-PA 1..676 1..676 3577 100 Plus
CG9447-PC 656 CG9447-PC 1..633 34..675 818 30.2 Plus
CG32645-PB 853 CG32645-PB 409..844 223..675 327 24.6 Plus
CG14204-PB 743 CG14204-PB 283..677 263..675 326 25.3 Plus
CG14204-PA 743 CG14204-PA 283..677 263..675 326 25.3 Plus
CG30471-PB 735 CG30471-PB 249..727 186..675 270 23.8 Plus
CG17707-PC 989 CG17707-PC 565..985 233..674 264 23.6 Plus
CG17707-PB 990 CG17707-PB 566..986 233..674 264 23.6 Plus
CG3106-PB 742 CG3106-PB 248..677 222..668 261 22.9 Plus
CG3106-PA 742 CG3106-PA 248..677 222..668 261 22.9 Plus
CG42329-PA 691 CG5156-PA 225..645 232..668 258 22.3 Plus
CG11353-PB 754 CG11353-PB 323..744 233..675 254 23.9 Plus
CG11353-PA 754 CG11353-PA 323..744 233..675 254 23.9 Plus
CG5892-PB 738 CG5892-PB 234..670 222..675 252 22.6 Plus
CG14205-PA 713 CG14205-PA 282..674 263..675 250 22.3 Plus
CG10183-PB 685 CG10183-PB 259..653 263..674 242 23.4 Plus
CG16723-PB 695 CG16723-PB 215..652 222..676 234 22.4 Plus
CG13325-PD 697 CG13325-PD 312..654 304..668 231 23.9 Plus
CG13325-PC 697 CG13325-PC 312..654 304..668 231 23.9 Plus
CG13325-PB 697 CG13325-PB 312..654 304..668 231 23.9 Plus
CG13325-PA 697 CG13325-PA 312..654 304..668 231 23.9 Plus
CG14219-PA 724 CG14219-PA 242..668 222..675 226 22.9 Plus
CG33337-PB 708 CG33337-PB 182..659 164..676 219 22.1 Plus
drd-PA 827 CG33968-PA 391..781 267..675 165 22.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:20:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23511-PA 664 GI23511-PA 1..647 6..654 2714 75.3 Plus
Dmoj\GI19812-PA 615 GI19812-PA 1..615 34..647 806 32.4 Plus
Dmoj\GI16178-PA 750 GI16178-PA 306..741 223..675 304 24.7 Plus
Dmoj\GI14628-PA 749 GI14628-PA 256..654 222..637 254 25.2 Plus
Dmoj\GI14663-PA 1049 GI14663-PA 540..1045 119..674 227 22.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:20:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21652-PA 670 GL21652-PA 1..670 7..676 3172 86.7 Plus
Dper\GL10966-PA 444 GL10966-PA 1..309 34..361 421 32.4 Plus
Dper\GL11214-PA 710 GL11214-PA 250..675 225..671 222 25.2 Plus
Dper\GL16613-PA 693 GL16613-PA 250..595 222..584 222 25.1 Plus
Dper\GL20075-PA 736 GL20075-PA 305..718 233..667 219 24 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:20:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18270-PA 670 GA18270-PA 1..670 7..676 3176 86.9 Plus
Dpse\GA24550-PA 605 GA24550-PA 1..584 34..636 789 32.8 Plus
Dpse\GA25773-PA 869 GA25773-PA 414..860 210..675 302 24.9 Plus
Dpse\GA22311-PA 759 GA22311-PA 257..655 222..637 257 24.5 Plus
Dpse\GA15865-PA 736 GA15865-PA 305..718 233..667 226 24.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24263-PA 681 GM24263-PA 6..681 1..676 3563 98.2 Plus
Dsec\GM20843-PA 648 GM20843-PA 1..594 34..639 767 32 Plus
Dsec\GM11604-PA 853 GM11604-PA 398..844 210..675 300 24.3 Plus
Dsec\GM11352-PA 612 GM11352-PA 207..605 222..637 240 23.9 Plus
Dsec\GM21621-PA 735 GM21621-PA 305..727 233..675 224 23.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19051-PA 694 GD19051-PA 1..663 1..663 3515 98.3 Plus
Dsim\GD10294-PA 653 GD10294-PA 1..594 34..639 779 32 Plus
Dsim\GD17103-PA 750 GD17103-PA 295..741 210..675 301 24.3 Plus
Dsim\GD19409-PA 738 GD19409-PA 205..671 180..676 225 23.7 Plus
Dsim\GD11123-PA 735 GD11123-PA 305..727 233..675 219 23.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10262-PA 679 GJ10262-PA 1..679 1..676 2769 73.6 Plus
Dvir\GJ18498-PA 603 GJ18498-PA 1..599 34..639 887 32.7 Plus
Dvir\GJ16668-PA 927 GJ16668-PA 483..918 223..675 300 24.5 Plus
Dvir\GJ19098-PA 748 GJ19098-PA 255..653 222..637 237 24.9 Plus
Dvir\GJ14735-PA 1051 GJ14735-PA 707..1047 315..674 227 26.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:20:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12787-PA 673 GK12787-PA 1..673 7..676 3119 84.2 Plus
Dwil\GK12786-PA 1494 GK12786-PA 1..483 34..515 2278 84.3 Plus
Dwil\GK20761-PA 641 GK20761-PA 1..624 34..636 756 32.7 Plus
Dwil\GK17715-PA 847 GK17715-PA 392..838 210..675 304 25 Plus
Dwil\GK15256-PA 416 GK15256-PA 2..412 211..638 303 24.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:20:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24342-PA 674 GE24342-PA 1..674 1..676 3491 96.6 Plus
Dyak\GE24399-PA 656 GE24399-PA 16..633 52..675 758 29.4 Plus
Dyak\GE17048-PA 800 GE17048-PA 345..791 210..675 300 24.3 Plus
Dyak\GE15850-PA 733 GE15850-PA 281..675 263..675 269 23.9 Plus
Dyak\GE11715-PA 737 GE11715-PA 247..729 188..675 260 25.6 Plus

RE24423.hyp Sequence

Translation from 348 to 2378

> RE24423.hyp
MHPMTMMMLHIVILAATFTAAQCFQLNMTQFYEMPPLYDLDDYDRCLQEL
NGQASTYCFVRAEVQPDESVAAWRAIAEISQYDRHHFDHRQLYFGLCLRE
CEASLAGLNKSELEALQAGLLSENAKVNVYLDLFSMEANNRQRHQRLTNA
CLNWRLQRRGFGVLAKSVVEYCDEAGHQVEDDAWNLTFYGILGTLLVLAC
LGSLVDLHLKRSRHDKMLKERDHYKTPPKSTAQQVLLTFSVARNWYRLNQ
EPSGKIGRELRFLDCFKFFAMFMVIFAHTNWVIYESAISNPQDPERLLHT
AAGTLLVSGSLITVTFFVISGLLLTINWLAVSRSLESKKDTWSFGQYALL
FVKFNIFRYIRLTVPYAFVLLMSGVYFENAGGPLWRHIFEREQLACRRNW
WTNLLYVNNFVRTDERCLLQGWYLAADTHSFVLSLVLLMLGHRFVRWSKQ
LYAGILGLFVVVPMVLTYAMNYYPIFVPTPQTQKDSFIGDRQFTEFYTSS
FMNFGSYFCGVLAALVYDQLALKQYKLRELKSFQLLWFTLIPVGILWLFS
AHPIFQHYYVTPSAIWGALYAGLQRNIWGFGLGIFIVGMASKVGWIFRKF
CCLPIFRILGRLTYGAFIVHLLVARIVLATVREPIYFGTGMMFAFIFFTV
TVSYLCSFLLAIFLELPVSSFLKLMR*

RE24423.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:42:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG4576-PA 676 CG4576-PA 1..676 1..676 3577 100 Plus
CG9447-PC 656 CG9447-PC 1..633 34..675 818 30.2 Plus
CG32645-PB 853 CG32645-PB 409..844 223..675 327 24.6 Plus
CG14204-PB 743 CG14204-PB 283..677 263..675 326 25.3 Plus
CG14204-PA 743 CG14204-PA 283..677 263..675 326 25.3 Plus