![]() | BDGP Sequence Production Resources |
Search the DGRC for RE24633
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 246 |
Well: | 33 |
Vector: | pFlc-1 |
Associated Gene/Transcript | ckd-RC |
Protein status: | RE24633.pep: gold |
Sequenced Size: | 1292 |
Gene | Date | Evidence |
---|---|---|
CG14959 | 2004-01-14 | Blastp of sequenced clone |
CG14959 | 2008-04-29 | Release 5.5 accounting |
CG14959 | 2008-08-15 | Release 5.9 accounting |
CG14959 | 2008-12-18 | 5.12 accounting |
1292 bp (1292 high quality bases) assembled on 2004-01-14
GenBank Submission: BT011465
> RE24633.complete ATTCGTTCAACGGGCGCTTGAGCGAACGGTTGTTGCTTTGTCTTTTAGCT TTGGCTTTGTATCTTTGCATCCGACGGATACGCGATTCGATTTGAGCTGT GCCGCGACTTTGAGTGTGTGTGCGTGTGAAGAAAGAGCTATATTTATATA TACATATATATATATATAAATATATACATATATAAAATATATTTTGTTGC CGTTTTCTGGCTGGTGAAATAGCCATAGCAATCCGCCATCGTAATAGCAA TAGTTTTTCCAGTGTTCATTACATAAAGTATCAACGCCAAAATTTAAATA TCTCTGTATATACGCATGCCCAGCGAGAAAATCTTATGCAAATGCGTTTT CAAAAATAATTAAGCGCCAGCCTCGAAATTTGGCAAGAAAGTCGTTTGCA GTGCCTCAGTGACTTTCTCGGGATTTCTTGGATTCAATTCGAATTTAGTT TGGATTTCGGATATTTGGATACTCAGCCGCAGTGCAACCTCTAAATCAAG CCCGCTCCCCGTTTTAGCCATGTGCCGGCCATAAACCGAAGACACGCTTC CTAATTGAAAACAGAGCCAGCTAAATGGATGCGTAGCAAGAGGCCAGAAG AGCGAGCGAGAGGGCGAGTGTGTGCGACAGAGAGAGCGAGTGCGAGACGA TCGTGATTTGGATTTTCAGCGTGATATCAAAACGGAGCGGACAGCAGTCG AGCGGTCGGTCGAGAAAACAAAACAAAAAAAACAAAAATCACGCCAAAAT GTTCAACACCACAAAAATGGTTTACAGTTATAGAATTTTATGGCTTTCCG GCGTTTTACTAGGTCCTATTTTGCTGGCCGCCATTGCGGTTCAAGGCCAA GAGCCAGCCAGTCCAGTATTTCAAAATCACAAGACGAAGGAATGGACGAA TTTAGATAATATAACATTCTCATTCGATTGCAAGAGGCGTTCTGTGGGCT TCTATGCCGACATGGAGTACAATTGCCAGATCTTTCACATGTGCGACGAG GAGGGCAATCGGATTCCCCATCTGTGCGCCAATGAGACGAGCTTTAACCA GGAGTACAGAATCTGTGATTGGGACTACAACTTTAACTGCACAGAGTCAC CCAAATGGTTCTACCTGAACGAACTGACCTATGCCACAGATCCGCCAGAT GAAGATGACGAGGATTACTGAACGATTTGCACTTAATTAAATATTTATTG TGTGTCTCCAAAAGCAAACAAACTAATTAAATTAAACGCCGTATGCAAAA CGCTGAGTAATTGTAACTGAAAGCAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3257570..3258069 | 1..500 | 2500 | 100 | Plus |
chr3L | 24539361 | chr3L | 3265826..3266142 | 498..814 | 1585 | 100 | Plus |
chr3L | 24539361 | chr3L | 3267031..3267203 | 1103..1275 | 865 | 100 | Plus |
chr3L | 24539361 | chr3L | 3266545..3266713 | 811..979 | 845 | 100 | Plus |
chr3L | 24539361 | chr3L | 3266844..3266969 | 977..1102 | 630 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 3258156..3258655 | 1..500 | 2500 | 100 | Plus |
3L | 28110227 | 3L | 3266400..3266716 | 498..814 | 1585 | 100 | Plus |
3L | 28110227 | 3L | 3267609..3267798 | 1103..1292 | 935 | 99.5 | Plus |
3L | 28110227 | 3L | 3267119..3267287 | 811..979 | 845 | 100 | Plus |
3L | 28110227 | 3L | 3267422..3267547 | 977..1102 | 630 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 3258156..3258655 | 1..500 | 2500 | 100 | Plus |
3L | 28103327 | 3L | 3266400..3266716 | 498..814 | 1585 | 100 | Plus |
3L | 28103327 | 3L | 3267609..3267798 | 1103..1292 | 935 | 99.4 | Plus |
3L | 28103327 | 3L | 3267119..3267287 | 811..979 | 845 | 100 | Plus |
3L | 28103327 | 3L | 3267422..3267547 | 977..1102 | 630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3265829..3266140 | 501..812 | 100 | -> | Plus |
chr3L | 3266547..3266713 | 813..979 | 100 | -> | Plus |
chr3L | 3266847..3266969 | 980..1102 | 100 | -> | Plus |
chr3L | 3267031..3267203 | 1103..1276 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14959-RC | 1..423 | 749..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ckd-RC | 1..423 | 749..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ckd-RC | 1..423 | 749..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14959-RC | 1..423 | 749..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ckd-RC | 1..423 | 749..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14959-RC | 2..1251 | 1..1250 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ckd-RC | 2..1276 | 1..1276 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ckd-RC | 2..1276 | 1..1276 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14959-RC | 2..1251 | 1..1250 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ckd-RC | 2..1276 | 1..1276 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3258156..3258655 | 1..500 | 100 | -> | Plus |
3L | 3266403..3266714 | 501..812 | 100 | -> | Plus |
3L | 3267121..3267287 | 813..979 | 100 | -> | Plus |
3L | 3267425..3267547 | 980..1102 | 100 | -> | Plus |
3L | 3267609..3267781 | 1103..1276 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3258156..3258655 | 1..500 | 100 | -> | Plus |
3L | 3266403..3266714 | 501..812 | 100 | -> | Plus |
3L | 3267121..3267287 | 813..979 | 100 | -> | Plus |
3L | 3267425..3267547 | 980..1102 | 100 | -> | Plus |
3L | 3267609..3267781 | 1103..1276 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3258156..3258655 | 1..500 | 100 | -> | Plus |
3L | 3266403..3266714 | 501..812 | 100 | -> | Plus |
3L | 3267121..3267287 | 813..979 | 100 | -> | Plus |
3L | 3267425..3267547 | 980..1102 | 100 | -> | Plus |
3L | 3267609..3267781 | 1103..1276 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3258156..3258655 | 1..500 | 100 | -> | Plus |
arm_3L | 3266403..3266714 | 501..812 | 100 | -> | Plus |
arm_3L | 3267121..3267287 | 813..979 | 100 | -> | Plus |
arm_3L | 3267425..3267547 | 980..1102 | 100 | -> | Plus |
arm_3L | 3267609..3267781 | 1103..1276 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3267121..3267287 | 813..979 | 100 | -> | Plus |
3L | 3267425..3267547 | 980..1102 | 100 | -> | Plus |
3L | 3267609..3267781 | 1103..1276 | 99 | Plus | |
3L | 3258156..3258655 | 1..500 | 100 | -> | Plus |
3L | 3266403..3266714 | 501..812 | 100 | -> | Plus |
Translation from 748 to 1170
> RE24633.hyp MFNTTKMVYSYRILWLSGVLLGPILLAAIAVQGQEPASPVFQNHKTKEWT NLDNITFSFDCKRRSVGFYADMEYNCQIFHMCDEEGNRIPHLCANETSFN QEYRICDWDYNFNCTESPKWFYLNELTYATDPPDEDDEDY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ckd-PE | 140 | CG14959-PE | 1..140 | 1..140 | 789 | 100 | Plus |
ckd-PD | 140 | CG14959-PD | 1..140 | 1..140 | 789 | 100 | Plus |
ckd-PC | 140 | CG14959-PC | 1..140 | 1..140 | 789 | 100 | Plus |
CG13675-PC | 151 | CG13675-PC | 69..139 | 58..128 | 173 | 42.3 | Plus |
CG13675-PD | 355 | CG13675-PD | 69..139 | 58..128 | 173 | 42.3 | Plus |
Translation from 748 to 1170
> RE24633.pep MFNTTKMVYSYRILWLSGVLLGPILLAAIAVQGQEPASPVFQNHKTKEWT NLDNITFSFDCKRRSVGFYADMEYNCQIFHMCDEEGNRIPHLCANETSFN QEYRICDWDYNFNCTESPKWFYLNELTYATDPPDEDDEDY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10125-PA | 140 | GF10125-PA | 1..140 | 1..140 | 751 | 97.9 | Plus |
Dana\GF16520-PA | 620 | GF16520-PA | 31..127 | 30..139 | 177 | 36.4 | Plus |
Dana\GF18106-PA | 1141 | GF18106-PA | 866..937 | 58..128 | 175 | 43.1 | Plus |
Dana\GF17663-PA | 1133 | GF17663-PA | 96..158 | 58..121 | 169 | 45.3 | Plus |
Dana\GF10477-PA | 346 | GF10477-PA | 79..150 | 57..128 | 161 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15117-PA | 140 | GG15117-PA | 1..140 | 1..140 | 747 | 97.9 | Plus |
Dere\GG20015-PA | 641 | GG20015-PA | 48..129 | 58..139 | 175 | 40.2 | Plus |
Dere\GG13930-PA | 1128 | GG13930-PA | 96..158 | 58..121 | 169 | 45.3 | Plus |
Dere\GG20994-PA | 1230 | GG20994-PA | 67..137 | 58..125 | 163 | 44.4 | Plus |
Dere\GG14914-PA | 280 | GG14914-PA | 25..96 | 57..128 | 159 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15777-PA | 138 | GH15777-PA | 1..128 | 1..130 | 631 | 90 | Plus |
Dgri\GH15282-PA | 200 | GH15282-PA | 66..172 | 19..128 | 169 | 33.6 | Plus |
Dgri\GH18250-PA | 637 | GH18250-PA | 34..115 | 58..139 | 169 | 40.2 | Plus |
Dgri\GH18294-PA | 1152 | GH18294-PA | 96..158 | 58..121 | 166 | 43.8 | Plus |
Dgri\GH19216-PA | 971 | GH19216-PA | 675..746 | 58..128 | 163 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ckd-PE | 140 | CG14959-PE | 1..140 | 1..140 | 789 | 100 | Plus |
ckd-PD | 140 | CG14959-PD | 1..140 | 1..140 | 789 | 100 | Plus |
ckd-PC | 140 | CG14959-PC | 1..140 | 1..140 | 789 | 100 | Plus |
CG14880-PA | 637 | CG14880-PA | 48..129 | 58..139 | 176 | 40.2 | Plus |
CG14880-PB | 637 | CG14880-PB | 48..129 | 58..139 | 176 | 40.2 | Plus |
CG13675-PC | 151 | CG13675-PC | 69..139 | 58..128 | 173 | 42.3 | Plus |
CG13675-PD | 355 | CG13675-PD | 69..139 | 58..128 | 173 | 42.3 | Plus |
CG14304-PC | 942 | CG14304-PC | 666..737 | 58..128 | 168 | 43.1 | Plus |
CG14304-PB | 1136 | CG14304-PB | 860..931 | 58..128 | 168 | 43.1 | Plus |
CG14304-PA | 1136 | CG14304-PA | 860..931 | 58..128 | 168 | 43.1 | Plus |
thw-PC | 1137 | CG14608-PC | 109..171 | 58..121 | 162 | 45.3 | Plus |
CG14301-PB | 196 | CG14301-PB | 111..172 | 67..128 | 158 | 43.5 | Plus |
CG5756-PB | 742 | CG5756-PB | 67..137 | 58..125 | 156 | 44.4 | Plus |
CG5756-PC | 1220 | CG5756-PC | 67..137 | 58..125 | 156 | 44.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12556-PA | 138 | GI12556-PA | 1..128 | 1..130 | 646 | 92.3 | Plus |
Dmoj\GI23649-PA | 625 | GI23649-PA | 30..117 | 52..139 | 168 | 38.6 | Plus |
Dmoj\GI24104-PA | 1130 | GI24104-PA | 73..135 | 58..121 | 165 | 43.8 | Plus |
Dmoj\GI24252-PA | 1098 | GI24252-PA | 799..870 | 58..128 | 165 | 41.7 | Plus |
Dmoj\GI11993-PA | 323 | GI11993-PA | 41..112 | 57..128 | 164 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21236-PA | 305 | GL21236-PA | 1..68 | 1..68 | 350 | 95.6 | Plus |
Dper\GL22245-PA | 658 | GL22245-PA | 46..127 | 58..139 | 175 | 40.2 | Plus |
Dper\GL12429-PA | 1215 | GL12429-PA | 96..158 | 58..121 | 168 | 45.3 | Plus |
Dper\GL10537-PA | 1248 | GL10537-PA | 71..140 | 58..124 | 153 | 42.3 | Plus |
Dper\GL23171-PA | 196 | GL23171-PA | 111..172 | 67..128 | 150 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13384-PA | 140 | GA13384-PA | 1..140 | 1..140 | 753 | 98.6 | Plus |
Dpse\GA13317-PA | 658 | GA13317-PA | 46..127 | 58..139 | 175 | 40.2 | Plus |
Dpse\GA12893-PA | 1184 | GA12893-PA | 905..976 | 58..128 | 171 | 43.1 | Plus |
Dpse\GA12452-PA | 336 | GA12452-PA | 46..165 | 8..128 | 169 | 33.3 | Plus |
Dpse\GA13107-PB | 1142 | GA13107-PB | 96..158 | 58..121 | 168 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14552-PA | 140 | GM14552-PA | 1..140 | 1..140 | 755 | 99.3 | Plus |
Dsec\GM15438-PA | 641 | GM15438-PA | 48..129 | 58..139 | 174 | 40.2 | Plus |
Dsec\GM10942-PA | 1121 | GM10942-PA | 96..158 | 58..121 | 169 | 45.3 | Plus |
Dsec\GM18696-PA | 1152 | GM18696-PA | 876..947 | 58..128 | 169 | 43.1 | Plus |
Dsec\GM24965-PA | 315 | GM24965-PA | 55..126 | 57..128 | 159 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13744-PA | 140 | GD13744-PA | 1..140 | 1..140 | 755 | 99.3 | Plus |
Dsim\GD20294-PA | 641 | GD20294-PA | 48..129 | 58..139 | 167 | 40.2 | Plus |
Dsim\GD13016-PA | 282 | GD13016-PA | 25..96 | 57..128 | 159 | 41.7 | Plus |
Dsim\GD25417-PA | 1225 | GD25417-PA | 8..137 | 14..125 | 151 | 32.8 | Plus |
Dsim\GD20160-PA | 185 | GD20160-PA | 100..161 | 67..128 | 148 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15459-PA | 138 | GJ15459-PA | 1..128 | 1..130 | 641 | 90.8 | Plus |
Dvir\GJ23493-PA | 616 | GJ23493-PA | 37..118 | 58..139 | 175 | 40.2 | Plus |
Dvir\GJ12216-PA | 213 | GJ12216-PA | 80..186 | 19..128 | 169 | 34.5 | Plus |
Dvir\GJ10824-PA | 1126 | GJ10824-PA | 837..908 | 58..128 | 166 | 41.7 | Plus |
Dvir\GJ10927-PA | 1173 | GJ10927-PA | 97..159 | 58..121 | 166 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10603-PA | 140 | GK10603-PA | 1..130 | 1..130 | 658 | 90.8 | Plus |
Dwil\GK14170-PA | 1051 | GK14170-PA | 767..838 | 58..128 | 177 | 44.4 | Plus |
Dwil\GK10819-PA | 1146 | GK10819-PA | 96..158 | 58..121 | 169 | 45.3 | Plus |
Dwil\GK13506-PA | 624 | GK13506-PA | 52..133 | 58..139 | 165 | 39 | Plus |
Dwil\GK19836-PA | 338 | GK19836-PA | 54..125 | 57..128 | 164 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21344-PA | 140 | GE21344-PA | 1..140 | 1..140 | 757 | 99.3 | Plus |
Dyak\GE26319-PA | 641 | GE26319-PA | 48..129 | 58..139 | 175 | 40.2 | Plus |
Dyak\GE24913-PA | 1058 | GE24913-PA | 95..157 | 58..121 | 172 | 45.3 | Plus |
Dyak\GE13937-PA | 1226 | GE13937-PA | 8..137 | 14..125 | 163 | 34.3 | Plus |
Dyak\GE20368-PA | 282 | GE20368-PA | 25..96 | 57..128 | 159 | 41.7 | Plus |