BDGP Sequence Production Resources |
Search the DGRC for RE24638
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 246 |
Well: | 38 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11857-RA |
Protein status: | RE24638.pep: gold |
Preliminary Size: | 1155 |
Sequenced Size: | 1816 |
Gene | Date | Evidence |
---|---|---|
CG11857 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11857 | 2002-03-28 | Blastp of sequenced clone |
CG11857 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11857 | 2008-04-29 | Release 5.5 accounting |
CG11857 | 2008-08-15 | Release 5.9 accounting |
CG11857 | 2008-12-18 | 5.12 accounting |
1816 bp (1816 high quality bases) assembled on 2002-03-28
GenBank Submission: AY094863
> RE24638.complete GGCCGATAGTTTGACAGCCCTGCCACTGAGAGAGCATAATGACGTGGTGA ACTCTGTGTGAAAAAAGAACAATAAATTGCCGACAAATCTCTAGTGTAAT TAAATTAGTTACCGCATAGAAACGCACTAAACTGTGGCCAGAACTTTACG AATCCCGAATACTGTCTATATAGCAATCTCAGGAAACTGACAGTTGAAAC AGCCCTACAACAAGGAGGAAGAAGAAGAAGGCGACGACGGGCGGTGCAGA ATATGAATTAGAGAATAATTAGCGATTGAAGCGCGTCTAGTTTGCCAGTT GGCCCATTTCGTGTTTTGTTAGCCCCTTTCCGGCAGCCCCTGCCCCCGTC CCGGAAAATTTTGCAATTCCCGAATCGATACACGTGTGCAGCGAGAACAA CGACAGCGTCAAAGTCAACAATAAAAGTCGAGGGCCGGAGATTAATGAGA GACTACCGACGACGACCATGATGAACGAGGACAGCAGTGCTGCCGGCGGC GGCGGGGTTAAGAAGTTCTTTCAGCGCCTCTCACAGACCTACCAATCCGC CTTGGACCGTAGCACACCGCACACACGAATGCGCTGGGTGTTCGCCGGCT TTCTGCTCCTGCTCTTTGTGCTGCGCATCTTCATCTATCAGGGCTGGTAC ATCGTGTGCTATGCGCTTGGCATTTACCACTTGAACCTGTTTATCGCTTT TTTAACGCCCAAGATCGACCCGGAGTTCGATCCGTATTCGCAGGATGACG AGGACGAGGGACCCAATCTGCCAACTCGCAGCAACGAAGAGTTCCGGCCA TTCATTCGCCGCCTGCCGGAGTTCAAGTTCTGGCTGTCGGTGGCGAAGAG CACGCTCATCGGTCTGATTTGTACATTCTTCGATTTCTTCAACGTGCCGG TATTCTGGCCCATCCTGGTCATGTACTTTATCACGCTCTTCTGCATCACG ATGAAGCGCCAGATCAAGCATATGATCAAGTACAAGTACTTGCCGTTTAC CCGCAATAAACCGCGCTACCAGCGGGTGAATGATCTGGCGGGTTCCGGAC CCGGTTCCGTGGCGGGCAACTCAAAGTGACAATTAGCCGCACAGACGTCG GACACGCGGGCGACGGCAGCGGGATCGGGTGATCCTTCAAATGCCTCTTC TGCAGCTGCAGCGCCACCATCACCAACCAGCGACAGCGCAGCGACCAAGG ATGTGGGGTCGCCAACAGCATCGTCCATCAAACCACCGCAGATCATTGCC ATTGAGGACTACTAGAGAAAGCTACCGAAAGCAGCCCGGAATGGGAACCA GCAGCATAACATCAACCAGAAACAAGCTTATAATATGATTTTCCTTTTCG GTTTGTGTAGCATTTTTCGTTTCACTGTTGAGTTGTCGTACGGCGTCTTG TGCAAAATACCTTGTTTATTGTTTAATCTAACTGCTTGTTTAAATTTATA TTTATTTACAATGCTTTCTATCTATTGTAAATCCCAAACGATACCGAAAT ACTGCAGATCAGCTCTAATTTAGTTTTTCATCCTAATCCTAACAATAATT TAATAACTCTTCTATCCAAAAAGTAGACTTACTGTATTTGAATCCAATTA TTTTTGATTATCGTGCTAAGATGCTATAATAATATGTCTAAATATATATA CAAACATATATATATATATATTTTGCATTATGATTATACAATTTTTGTTA GCGTTAACTATACAGAATGTTAAAAAAAGGCGAATTGAAAACTGAAACTA TAGGAAGTGTACACTGGGTGCGTCTTATGAATAAAGAAAGACAAAAGAAA ACAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11857-RA | 1959 | CG11857-RA | 122..1926 | 2..1806 | 8995 | 99.8 | Plus |
CG11857-RB | 1740 | CG11857-RB | 2..1025 | 2..1025 | 5105 | 99.9 | Plus |
CG11857.a | 1662 | CG11857.a | 96..947 | 174..1025 | 4245 | 99.8 | Plus |
CG11857-RB | 1740 | CG11857-RB | 1025..1737 | 1094..1806 | 3550 | 99.8 | Plus |
CG11857.a | 1662 | CG11857.a | 947..1659 | 1094..1806 | 3550 | 99.8 | Plus |
CG11857.a | 1662 | CG11857.a | 2..95 | 2..95 | 470 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
412 | 7567 | 412 412 7567bp | 6639..6816 | 1589..1412 | 124 | 57.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21081980..21082515 | 1..536 | 99 | -> | Plus |
chr3R | 21082577..21083819 | 537..1779 | 96 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11857-RA | 1..612 | 468..1079 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11857-RA | 1..612 | 468..1079 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11857-RA | 1..612 | 468..1079 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11857-RA | 1..612 | 468..1079 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11857-RA | 1..612 | 468..1079 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11857-RA | 2..1779 | 2..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11857-RA | 2..1779 | 2..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11857-RA | 1..1778 | 2..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11857-RA | 2..1779 | 2..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11857-RA | 1..1778 | 2..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25258897..25259432 | 1..536 | 99 | -> | Plus |
3R | 25259494..25260736 | 537..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25258897..25259432 | 1..536 | 99 | -> | Plus |
3R | 25259494..25260736 | 537..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25258897..25259432 | 1..536 | 99 | -> | Plus |
3R | 25259494..25260736 | 537..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21084619..21085154 | 1..536 | 99 | -> | Plus |
arm_3R | 21085216..21086458 | 537..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24999728..25000263 | 1..536 | 99 | -> | Plus |
3R | 25000325..25001567 | 537..1779 | 99 | Plus |
Translation from 467 to 1078
> RE24638.pep MMNEDSSAAGGGGVKKFFQRLSQTYQSALDRSTPHTRMRWVFAGFLLLLF VLRIFIYQGWYIVCYALGIYHLNLFIAFLTPKIDPEFDPYSQDDEDEGPN LPTRSNEEFRPFIRRLPEFKFWLSVAKSTLIGLICTFFDFFNVPVFWPIL VMYFITLFCITMKRQIKHMIKYKYLPFTRNKPRYQRVNDLAGSGPGSVAG NSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17557-PA | 203 | GF17557-PA | 1..203 | 1..203 | 994 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11383-PA | 203 | GG11383-PA | 1..203 | 1..203 | 1075 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22588-PA | 208 | GH22588-PA | 1..208 | 1..203 | 912 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11857-PA | 203 | CG11857-PA | 1..203 | 1..203 | 1092 | 100 | Plus |
CG11857-PC | 265 | CG11857-PC | 1..203 | 1..203 | 1092 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23640-PA | 208 | GI23640-PA | 1..208 | 1..203 | 919 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21709-PA | 207 | GL21709-PA | 1..207 | 1..203 | 957 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11240-PA | 207 | GA11240-PA | 1..207 | 1..203 | 957 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17826-PA | 203 | GM17826-PA | 1..203 | 1..203 | 1080 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21194-PA | 203 | GD21194-PA | 1..203 | 1..203 | 1080 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24716-PA | 206 | GJ24716-PA | 1..206 | 1..203 | 942 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12924-PA | 207 | GK12924-PA | 1..207 | 1..203 | 929 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23580-PA | 203 | GE23580-PA | 1..203 | 1..203 | 1076 | 99 | Plus |
Translation from 467 to 1078
> RE24638.hyp MMNEDSSAAGGGGVKKFFQRLSQTYQSALDRSTPHTRMRWVFAGFLLLLF VLRIFIYQGWYIVCYALGIYHLNLFIAFLTPKIDPEFDPYSQDDEDEGPN LPTRSNEEFRPFIRRLPEFKFWLSVAKSTLIGLICTFFDFFNVPVFWPIL VMYFITLFCITMKRQIKHMIKYKYLPFTRNKPRYQRVNDLAGSGPGSVAG NSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11857-PA | 203 | CG11857-PA | 1..203 | 1..203 | 1092 | 100 | Plus |