BDGP Sequence Production Resources |
Search the DGRC for RE24665
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 246 |
Well: | 65 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Bsg25A-RA |
Protein status: | RE24665.pep: gold |
Preliminary Size: | 1442 |
Sequenced Size: | 1366 |
Gene | Date | Evidence |
---|---|---|
CG12205 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12205 | 2002-02-22 | Blastp of sequenced clone |
CG12205 | 2003-01-01 | Sim4 clustering to Release 3 |
Bsg25A | 2008-04-29 | Release 5.5 accounting |
Bsg25A | 2008-08-15 | Release 5.9 accounting |
Bsg25A | 2008-12-18 | 5.12 accounting |
1366 bp (1366 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089611
> RE24665.complete ACCTGTAAAGGTTTTCGCATTGGTGGTATATAAGGTGTTGACTTATTAGC AGTAATTCAGTTTGCAAGTGGACAACAAGCAGCACAATGATTAACCGCCG TCAGCGTTTGGAATTCGCCCTGACCCTATTGCCCTATGATCCCGAGACAG TTCAGTTGTCTGAAACGCAGAAAAAAGTGGAGGCGATCATCGCCCGCCTG CGAACGGATGACTCCTTTACGGAGGAGGAGAGCGATGACTGCAAGGTGCG GCGCATTCAAGATGCAAATGAGTTTGCCGATTCCGCCATGCGACACATCG AAATGTCCGATAGTGGCAAGCTGAGCACTCTGGAAACTCTTACACTGGCT GCTGAGAAGCTGCTAAGGACACAGCGTTCACCGGATCAGGATTTCGATGA CATGGTGCAGGATGTGGAGTACTCGCAGCTGATGAGGAACACCATCCAGG CGGTAAATGAGGCGCGTTTGAAGCTTCTCCAGCAATGGGAGCGCAGTAAG CGCAAGGCTCTCGATCTCCTCACCATCGAAATTGAAAAGGTCCAGGAAAT GGATCAGGAGCCAGAGCACAAACAGTCTCATGAGCAGGACCAGGATCAGG AGCAGAGTTCGGAGCCTTTTAACGCGTTTCGCGATGGAGCCGATGAGCAC AACACCTCGACGCCGAAAACAAACGACGAAGATCTTGGTTTGGACGATGA CGATGAGGACTATGTGCCCGGCGGAGAAGAGACAATGGGTAACAAGAGGA AGCGTATCAAGAAACCGGTGACCTCCACTCCGAATGCGAAACGGCGGTGT CCTGGTTTCGAATTCGACCTGGACGGCGAATCGCCGATGGTGACGATCGG TCCCAATGGCACCGAAGTTTCCCGCATTAGCCTAAGTGCCATCAACTGGG ACATGACCGGACCCTCGATCACGAGGAAGCTGCTCTGCGAGATCTTCGAC CGGGATACACTGGCCCATCATACGCTATCCGGAAAACCATCGCCGGCATT TAGGGACTGTGCCCGTCCCAGCAAACAGCAGCTGGATCCGCTCAAGGTGG CCGATCTGGTCTATCTGATGACTAACAGCCTGGACATGACTCCGCGGGAA GTGCGCACTGCCATCACCACCAAATGTGCGGATGAAAACAAGATGCTACG CTCGCGAATGCAGCGCAAATCAAAGTAGGAAACTTTTCCATGGAAACTCC CTGGGAAAGACCTCCTTTTTCATTTTCTAGGAATGAATTCCCGAAAGTAG GTCCATTTACCCGTTAAAACCCTAATTCTGATTCTACAGTATACTAAGTC CCGGCACAGCCGATAACACCAATTGAATAAAGAAACCCACTTTCTTACCC AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Bsg25A-RA | 1448 | Bsg25A-RA | 4..1355 | 1..1352 | 6760 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 4682178..4683438 | 90..1350 | 100 | <- | Minus |
chr2L | 4683497..4683585 | 1..89 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg25A-RA | 1..1092 | 87..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg25A-RA | 1..1092 | 87..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg25A-RA | 1..1092 | 87..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg25A-RA | 1..1092 | 87..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg25A-RA | 1..1092 | 87..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg25A-RA | 1..1350 | 1..1350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg25A-RA | 1..1350 | 1..1350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg25A-RA | 3..1352 | 1..1350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg25A-RA | 1..1350 | 1..1350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg25A-RA | 3..1352 | 1..1350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4683052..4684312 | 90..1350 | 100 | <- | Minus |
2L | 4684371..4684459 | 1..89 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4683052..4684312 | 90..1350 | 100 | <- | Minus |
2L | 4684371..4684459 | 1..89 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4683052..4684312 | 90..1350 | 100 | <- | Minus |
2L | 4684371..4684459 | 1..89 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 4683052..4684312 | 90..1350 | 100 | <- | Minus |
arm_2L | 4684371..4684459 | 1..89 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4683052..4684312 | 90..1350 | 100 | <- | Minus |
2L | 4684371..4684459 | 1..89 | 100 | Minus |
Translation from 86 to 1177
> RE24665.pep MINRRQRLEFALTLLPYDPETVQLSETQKKVEAIIARLRTDDSFTEEESD DCKVRRIQDANEFADSAMRHIEMSDSGKLSTLETLTLAAEKLLRTQRSPD QDFDDMVQDVEYSQLMRNTIQAVNEARLKLLQQWERSKRKALDLLTIEIE KVQEMDQEPEHKQSHEQDQDQEQSSEPFNAFRDGADEHNTSTPKTNDEDL GLDDDDEDYVPGGEETMGNKRKRIKKPVTSTPNAKRRCPGFEFDLDGESP MVTIGPNGTEVSRISLSAINWDMTGPSITRKLLCEIFDRDTLAHHTLSGK PSPAFRDCARPSKQQLDPLKVADLVYLMTNSLDMTPREVRTAITTKCADE NKMLRSRMQRKSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23938-PA | 378 | GF23938-PA | 1..376 | 1..363 | 1376 | 78 | Plus |
Dana\GF20597-PA | 362 | GF20597-PA | 209..343 | 221..355 | 326 | 50 | Plus |
Dana\GF20590-PA | 380 | GF20590-PA | 260..361 | 246..349 | 208 | 45.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24360-PA | 370 | GG24360-PA | 1..370 | 1..363 | 1661 | 89 | Plus |
Dere\GG24506-PA | 375 | GG24506-PA | 253..356 | 251..355 | 300 | 52.4 | Plus |
Dere\GG24864-PA | 380 | GG24864-PA | 258..359 | 246..349 | 225 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13742-PA | 377 | GH13742-PA | 1..371 | 1..360 | 1197 | 65.1 | Plus |
Dgri\GH10578-PA | 381 | GH10578-PA | 257..360 | 251..355 | 298 | 54.3 | Plus |
Dgri\GH11155-PA | 307 | GH11155-PA | 165..283 | 230..349 | 211 | 38.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Bsg25A-PA | 363 | CG12205-PA | 1..363 | 1..363 | 1871 | 100 | Plus |
insv-PB | 376 | CG3227-PB | 168..365 | 158..362 | 290 | 38.3 | Plus |
insv-PA | 376 | CG3227-PA | 168..365 | 158..362 | 290 | 38.3 | Plus |
Elba2-PA | 381 | CG9883-PA | 261..374 | 249..363 | 230 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17884-PA | 387 | GI17884-PA | 1..384 | 1..363 | 1190 | 63 | Plus |
Dmoj\GI23044-PA | 390 | GI23044-PA | 271..374 | 251..355 | 306 | 54.3 | Plus |
Dmoj\GI17861-PA | 394 | GI17861-PA | 279..374 | 253..349 | 204 | 44.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15989-PA | 409 | GL15989-PA | 46..396 | 1..353 | 1250 | 73.2 | Plus |
Dper\GL26458-PA | 398 | GL26458-PA | 277..380 | 251..355 | 302 | 54.7 | Plus |
Dper\GL26565-PA | 379 | GL26565-PA | 258..359 | 246..349 | 219 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11475-PA | 363 | GA11475-PA | 1..350 | 2..353 | 1246 | 73.1 | Plus |
Dpse\GA16802-PA | 376 | GA16802-PA | 255..358 | 251..355 | 302 | 54.7 | Plus |
Dpse\GA22097-PA | 379 | GA22097-PA | 258..359 | 246..349 | 218 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18079-PA | 363 | GM18079-PA | 1..363 | 1..363 | 1861 | 96.4 | Plus |
Dsec\GM18215-PA | 376 | GM18215-PA | 254..357 | 251..355 | 296 | 52.4 | Plus |
Dsec\GM18346-PA | 381 | GM18346-PA | 259..360 | 246..349 | 225 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22697-PA | 363 | GD22697-PA | 1..363 | 1..363 | 1861 | 96.4 | Plus |
Dsim\GD22821-PA | 376 | GD22821-PA | 254..357 | 251..355 | 296 | 52.4 | Plus |
Dsim\GD23161-PA | 381 | GD23161-PA | 259..360 | 246..349 | 225 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17385-PA | 385 | GJ17385-PA | 1..382 | 1..363 | 1200 | 64.4 | Plus |
Dvir\GJ23568-PA | 389 | GJ23568-PA | 270..373 | 251..355 | 299 | 53.3 | Plus |
Dvir\GJ17359-PA | 374 | GJ17359-PA | 251..352 | 246..349 | 208 | 44.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23918-PA | 387 | GK23918-PA | 1..381 | 1..360 | 1185 | 64.2 | Plus |
Dwil\GK24494-PA | 379 | GK24494-PA | 254..357 | 251..355 | 313 | 55.2 | Plus |
Dwil\GK24562-PA | 370 | GK24562-PA | 255..358 | 253..357 | 222 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14697-PA | 369 | GE14697-PA | 1..369 | 1..363 | 1691 | 92.4 | Plus |
Dyak\GE15077-PA | 375 | GE15077-PA | 253..356 | 251..355 | 302 | 52.4 | Plus |
Dyak\GE18162-PA | 381 | GE18162-PA | 259..360 | 246..349 | 224 | 47.1 | Plus |
Translation from 86 to 1177
> RE24665.hyp MINRRQRLEFALTLLPYDPETVQLSETQKKVEAIIARLRTDDSFTEEESD DCKVRRIQDANEFADSAMRHIEMSDSGKLSTLETLTLAAEKLLRTQRSPD QDFDDMVQDVEYSQLMRNTIQAVNEARLKLLQQWERSKRKALDLLTIEIE KVQEMDQEPEHKQSHEQDQDQEQSSEPFNAFRDGADEHNTSTPKTNDEDL GLDDDDEDYVPGGEETMGNKRKRIKKPVTSTPNAKRRCPGFEFDLDGESP MVTIGPNGTEVSRISLSAINWDMTGPSITRKLLCEIFDRDTLAHHTLSGK PSPAFRDCARPSKQQLDPLKVADLVYLMTNSLDMTPREVRTAITTKCADE NKMLRSRMQRKSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Bsg25A-PA | 363 | CG12205-PA | 1..363 | 1..363 | 1871 | 100 | Plus |
insv-PB | 376 | CG3227-PB | 168..365 | 158..362 | 290 | 38.3 | Plus |
insv-PA | 376 | CG3227-PA | 168..365 | 158..362 | 290 | 38.3 | Plus |
Elba2-PA | 381 | CG9883-PA | 261..374 | 249..363 | 230 | 43.5 | Plus |