BDGP Sequence Production Resources |
Search the DGRC for RE25571
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 255 |
Well: | 71 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG4577-RA |
Protein status: | RE25571.pep: gold |
Preliminary Size: | 1833 |
Sequenced Size: | 2543 |
Gene | Date | Evidence |
---|---|---|
CG4577 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4577 | 2002-04-04 | Blastp of sequenced clone |
CG4577 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4577 | 2008-04-29 | Release 5.5 accounting |
CG4577 | 2008-08-15 | Release 5.9 accounting |
CG4577 | 2008-12-18 | 5.12 accounting |
2543 bp (2543 high quality bases) assembled on 2002-04-04
GenBank Submission: AY095077
> RE25571.complete GTTCATTCAGAACAGTCGAAGTGCGCAGACCACTGGGATCCAAACACCGG CAGAAACCAGGCCAGGAGTCGAAGTCGACCTCCCACCTCCAGCCAGATCC GAATCCTATTTGGGACACCACCAGCTAGAGCCAAGTCAAGTGCCGTTTGC CGTAAACATGCCACGCATCTCGTTGCCCGGCAGCAGCCTGCTGGTAGTCC TGGCACTGATCCTGTGCCTCAGCCTTCCAATCCGGGCGGTGCCCACCTCC GTGCTCGCCCAAGACACGGAGCTCTCCACCAGCGCCAACCACAAGCTCCA GCAGCAGCAGCAACAGCAGCAGCAGCATCACCAGCAGCAGCAGCTCCAGC AGCAGCAGCAGCAGCAACAGCCGGCCACAGCCAAACGCTCCGAGGAGGCG AGTGCCGTGCCCACGGCGGACAAGAAGTCGAGTCCGGAAATTGTGCCCGC TTCCTTTAGCAACGCTCCGTCGGCCCGAAACAGCCCAGTTCCGGTCTCCA GCCAGCAGCAGGAGCAGCAGCAGGTGCCGTCCGGAGTCTACGCCCTGCCC TCCAACGAGGAGATCCTGGCCGCCGTAGCGGCCGCCGCCCAGAACAGCCA ACAGCAGTTGCAGGAGGAGCCCTCCGCCCTGGAGGAGGCGGTGGCCAGCT CCACGATGCGCAAGCGGGGCATCAATTACGAGTACAATCCGTACTCCGTC GCCTCCAGCGACTACGGCAGCGATGTGCCCAGTGGCGTTTGGTCCGACGA CTACGAGGCCGCCGTTCCTGTCAGCTATGGCGAGCGGGATCTCCAGGAGA TCGATGACTACGTGCCAGAGCGAAGAGTGAGTAGCTCGAGTGCGCGAAAC AAGGCCTACGACAATTTGCAGAATCTCCTGAACGCCGAGGCCTATCTGGA GAGCATTCCCCTCTCGGTGCCGCTGACCTATGCCAATCGGAACTACAACG TGGATGAGCGCAACAAGCGGGGTATCTACTACAACGTGGGCACTCCCGGC GGCAATGGGGCGAGCAGCCTGGGCAGTGGAAGTGGCTACAACGACGAGGG TATCAACCTCAACAAATATCGACGATTCAACGACATGCGACTTAAACGCG ACACCCAGCTCAATCCCGCCGACATGCTGGCCCTGGTTGCCCTGGTGGAG GCCGGAGAACGGGCGCGCAAGGAGAGCGATGCTGAGAGCTCCGGACCGGT GCCCATGATACCCTCCGATGACCTGGACTACGCGCCCGCCGGCAGCTGGT TCGACGTGCCCGTACAGGCGGACTACTACGGCGCCGGAGTGCCGCTGGAC AACCAGAACCAGGCGATGCCCAAGTACGAGTACGTGCCGCGTCAGCACAA GTACAGCGGAGTCAATAGCCGATTCGGCTCCTCGAAGCAGCGCTACATGG TGGCCAAGAAGAAGCGCTCGGTGAACCAGAGCCAATTCATGAACGAACCG GTGGCGGAGCGCGGATCCGGCTACAATGGCGAGAAGTACTTCTAAGGATC CCACGCGGAGATAGTCTACGTAGTACTTAATGATAGCCACAGGCCCCACG AAGAGTATTTCTCGTTTTTTTGAGCATTGAACATATTGAACATAATCCAA GAAACCAAAATCCAAATTCAATTTCTAATTCAATTATGATAAAGAGCTAG TGTCAAGGTCAACTCGTGTGCAATTTTTGTGTAGAATTTCACTTTCAAAA AACCCAATGGCGAGAATTAAACTATTGTTGCATGCAATGTGGTGCGTCAG GAGCATAATCAATCAGTGTCTAGGATTTTGTCCCACGGAATCCGCACCGA ACTAAACCGAATCTATATCTACGCCACCTAATCCCTGTAAGAAATCGGTG TCTATGTACAACTACTGCAATCTGAAATCCAGCGGAACCGCAACTTGTAT CTGTATCTACTTATCGAACTAGAGGCTTCCCGACTAGTACAAAACGAGAG AAGAACGTCAACTATGAATATGATTATATATAAAAATATGAATACATCTA TACATGCATATATCAATCCTAATCGAGCTCAGAAGCGACAAAAGCTCCAC TAACCGCTTTAATTTAATCTAAACTTATACTAACTAAAGCTAAAGCCAAA GCCAAGTATTTTGAATGCCATCACATTCCGAACTACACTTTTTATGTAAC CCCGCCGACTTGGGGACAAACGATCTGACAATTGATGAGAATTTTAATCG TATTTAGCGAGTATCGCAGCTAATATGTTGGTAAATTATATATATATATA TATAAATATACGTATACAATATGCAAACAATTTGTGGATAAATTTGTTAA GAAATGGCTCAGGGCATAAATATTTTAAATATTCTATGCCGACGACGAAG AGGCGTATTTTTAATTTGAATAAAATTGTCTGACTGTTTTCGGTAATAAT CAAATATACATACATATGTGTACTATGAATATGGTAAAATAAATTATATT ATACAGACTAAAATAAAATAGCGTATATATATATGTGTGTGTGTATACAA TACAGATTATATATAACTATATATATGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 1139713..1140867 | 1371..2527 | 5530 | 98.9 | Plus |
chr2L | 23010047 | chr2L | 1138499..1138948 | 378..827 | 2220 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 1134566..1134930 | 1..365 | 1810 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 1139363..1139645 | 1089..1371 | 1415 | 100 | Plus |
chr2L | 23010047 | chr2L | 1139003..1139266 | 826..1089 | 1320 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 1139832..1140990 | 1371..2529 | 5795 | 100 | Plus |
2L | 23513712 | 2L | 1138618..1139067 | 378..827 | 2250 | 100 | Plus |
2L | 23513712 | 2L | 1134702..1135081 | 1..380 | 1900 | 100 | Plus |
2L | 23513712 | 2L | 1139482..1139764 | 1089..1371 | 1415 | 100 | Plus |
2L | 23513712 | 2L | 1139122..1139385 | 826..1089 | 1320 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 1139832..1140990 | 1371..2529 | 5795 | 100 | Plus |
2L | 23513712 | 2L | 1138618..1139067 | 378..827 | 2250 | 100 | Plus |
2L | 23513712 | 2L | 1134702..1135081 | 1..380 | 1900 | 100 | Plus |
2L | 23513712 | 2L | 1139482..1139764 | 1089..1371 | 1415 | 100 | Plus |
2L | 23513712 | 2L | 1139122..1139385 | 826..1089 | 1320 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 1134566..1134863 | 1..298 | 100 | == | Plus |
chr2L | 1134967..1134978 | 336..347 | 100 | == | Plus |
chr2L | 1138499..1138948 | 378..827 | 99 | -> | Plus |
chr2L | 1139005..1139266 | 828..1089 | 100 | -> | Plus |
chr2L | 1139364..1139644 | 1090..1370 | 100 | -> | Plus |
chr2L | 1139713..1140736 | 1371..2398 | 96 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4577-RA | 1..1338 | 158..1495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4577-RA | 1..1338 | 158..1495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4577-RA | 1..1338 | 158..1495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4577-RA | 1..1338 | 158..1495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4577-RA | 1..1338 | 158..1495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4577-RA | 1..2527 | 1..2527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4577-RA | 1..2527 | 1..2527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4577-RA | 10..2536 | 1..2527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4577-RA | 1..2527 | 1..2527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4577-RA | 10..2536 | 1..2527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1134702..1135081 | 1..380 | 100 | -> | Plus |
2L | 1138621..1139067 | 381..827 | 100 | -> | Plus |
2L | 1139124..1139385 | 828..1089 | 100 | -> | Plus |
2L | 1139483..1139763 | 1090..1370 | 100 | -> | Plus |
2L | 1139832..1140988 | 1371..2527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1134702..1135081 | 1..380 | 100 | -> | Plus |
2L | 1138621..1139067 | 381..827 | 100 | -> | Plus |
2L | 1139124..1139385 | 828..1089 | 100 | -> | Plus |
2L | 1139483..1139763 | 1090..1370 | 100 | -> | Plus |
2L | 1139832..1140988 | 1371..2527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1134702..1135081 | 1..380 | 100 | -> | Plus |
2L | 1138621..1139067 | 381..827 | 100 | -> | Plus |
2L | 1139124..1139385 | 828..1089 | 100 | -> | Plus |
2L | 1139483..1139763 | 1090..1370 | 100 | -> | Plus |
2L | 1139832..1140988 | 1371..2527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 1134702..1135081 | 1..380 | 100 | -> | Plus |
arm_2L | 1138621..1139067 | 381..827 | 100 | -> | Plus |
arm_2L | 1139124..1139385 | 828..1089 | 100 | -> | Plus |
arm_2L | 1139483..1139763 | 1090..1370 | 100 | -> | Plus |
arm_2L | 1139832..1140988 | 1371..2527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1134702..1135081 | 1..380 | 100 | -> | Plus |
2L | 1138621..1139067 | 381..827 | 100 | -> | Plus |
2L | 1139124..1139385 | 828..1089 | 100 | -> | Plus |
2L | 1139483..1139763 | 1090..1370 | 100 | -> | Plus |
2L | 1139832..1140988 | 1371..2527 | 100 | Plus |
Translation from 0 to 1494
> RE25571.hyp FIQNSRSAQTTGIQTPAETRPGVEVDLPPPARSESYLGHHQLEPSQVPFA VNMPRISLPGSSLLVVLALILCLSLPIRAVPTSVLAQDTELSTSANHKLQ QQQQQQQQHHQQQQLQQQQQQQQPATAKRSEEASAVPTADKKSSPEIVPA SFSNAPSARNSPVPVSSQQQEQQQVPSGVYALPSNEEILAAVAAAAQNSQ QQLQEEPSALEEAVASSTMRKRGINYEYNPYSVASSDYGSDVPSGVWSDD YEAAVPVSYGERDLQEIDDYVPERRVSSSSARNKAYDNLQNLLNAEAYLE SIPLSVPLTYANRNYNVDERNKRGIYYNVGTPGGNGASSLGSGSGYNDEG INLNKYRRFNDMRLKRDTQLNPADMLALVALVEAGERARKESDAESSGPV PMIPSDDLDYAPAGSWFDVPVQADYYGAGVPLDNQNQAMPKYEYVPRQHK YSGVNSRFGSSKQRYMVAKKKRSVNQSQFMNEPVAERGSGYNGEKYF*
Translation from 157 to 1494
> RE25571.pep MPRISLPGSSLLVVLALILCLSLPIRAVPTSVLAQDTELSTSANHKLQQQ QQQQQQHHQQQQLQQQQQQQQPATAKRSEEASAVPTADKKSSPEIVPASF SNAPSARNSPVPVSSQQQEQQQVPSGVYALPSNEEILAAVAAAAQNSQQQ LQEEPSALEEAVASSTMRKRGINYEYNPYSVASSDYGSDVPSGVWSDDYE AAVPVSYGERDLQEIDDYVPERRVSSSSARNKAYDNLQNLLNAEAYLESI PLSVPLTYANRNYNVDERNKRGIYYNVGTPGGNGASSLGSGSGYNDEGIN LNKYRRFNDMRLKRDTQLNPADMLALVALVEAGERARKESDAESSGPVPM IPSDDLDYAPAGSWFDVPVQADYYGAGVPLDNQNQAMPKYEYVPRQHKYS GVNSRFGSSKQRYMVAKKKRSVNQSQFMNEPVAERGSGYNGEKYF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15163-PA | 438 | GF15163-PA | 8..438 | 12..445 | 1502 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24767-PA | 433 | GG24767-PA | 25..433 | 25..445 | 1788 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11173-PA | 442 | GH11173-PA | 30..442 | 27..445 | 1191 | 63.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4577-PA | 445 | CG4577-PA | 1..445 | 1..445 | 2274 | 100 | Plus |
CG4577-PB | 446 | CG4577-PB | 1..446 | 1..445 | 2255 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17976-PA | 449 | GI17976-PA | 13..449 | 12..445 | 1170 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15562-PA | 452 | GL15562-PA | 32..452 | 25..445 | 1470 | 74.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18271-PA | 453 | GA18271-PA | 32..453 | 25..445 | 1478 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16794-PA | 428 | GM16794-PA | 1..428 | 1..445 | 1883 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23070-PA | 447 | GD23070-PA | 1..447 | 1..445 | 1727 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19509-PA | 431 | GJ19509-PA | 30..431 | 29..445 | 1206 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24668-PA | 427 | GK24668-PA | 4..427 | 10..445 | 1197 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17330-PA | 446 | GE17330-PA | 1..446 | 1..445 | 1817 | 89 | Plus |