RE25907.complete Sequence
733 bp (733 high quality bases) assembled on 2004-01-14
GenBank Submission: BT011463
> RE25907.complete
AGGGTATTCCGAGAGAGATCATGGATCGGAGAGTGACTGCGATTGGTTTG
GTTATCCTGCAGCTGCTGGTCAGCGGCCTCTGTTTCCAGGAGAAGGCGCC
ACTGCAGACGAGCCTGGTCAGCGGACAGGCCAGGACCGAAAAGCAGCAAC
AGGTGCTGGACGATCCGCTGGGAAGTGGACGCGGGATTGACGAGCACCTG
CTGAAGACCATTGAGGATCAGCAGCACCCACGGCAGTATGGCTATCCACC
GCAGTGGTCGCCAGGACCGCCCGCTTATCCGCCGCCACCGCAGCGTCCTT
GGGGGCCACCCCCTCCGCCCGGACCACCGCCGCCAGGACCTCCTCCTCCG
CCGGGACCCTACTACAATCCCTACTACAATGGCTACAACTACTACGGCGG
ATATGGCGGCTATGGATATGGGGGCTTTGGATATCCCGGCTTTGGCGGCT
ATTCTGGCTATCCCTACTATCCCTTCTATCGCTCCTCGACGGCTGGCGAG
GTCGATAACCAACTTCCCGGTGCCGATGGACTCACTTCCGCCGCCATTCC
TGGCGTTTTCCAGGGCAGGGCCGTGCTGTCCCACCAGAACTTCCTCGACG
GCAGGAACAACGCTAACGTTGTGCCACTTTATCACCTACTCCAAATGGCC
AGGGCTTGAAGTACTCTAATCCAATCATTGATTAAAACTTAATAAATTGT
GTACCATGTATATTCCGAAAAAAAAAAAAAAAA
RE25907.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:08:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9184.c | 1773 | CG9184.c | 786..1503 | 1..718 | 3575 | 99.8 | Plus |
CG9184-RA | 1350 | CG9184-RA | 575..1080 | 213..718 | 2530 | 100 | Plus |
CG9184.b | 1685 | CG9184.b | 910..1415 | 213..718 | 2530 | 100 | Plus |
CG9184-RA | 1350 | CG9184-RA | 273..485 | 1..213 | 1050 | 99.5 | Plus |
CG9184.b | 1685 | CG9184.b | 608..820 | 1..213 | 1050 | 99.5 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:31:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 1321443..1321947 | 717..213 | 2435 | 98.8 | Minus |
chr3L | 24539361 | chr3L | 1322037..1322199 | 213..51 | 815 | 100 | Minus |
chr3L | 24539361 | chr3L | 1322248..1322298 | 51..1 | 240 | 98 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:44:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:31:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1321946..1322451 | 718..213 | 2530 | 100 | Minus |
3L | 28110227 | 3L | 1322541..1322703 | 213..51 | 815 | 100 | Minus |
3L | 28110227 | 3L | 1322752..1322802 | 51..1 | 240 | 98 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:53:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 1321946..1322451 | 718..213 | 2530 | 100 | Minus |
3L | 28103327 | 3L | 1322541..1322703 | 213..51 | 815 | 100 | Minus |
3L | 28103327 | 3L | 1322752..1322802 | 51..1 | 240 | 98 | Minus |
Blast to na_te.dros performed on 2019-03-16 19:31:48 has no hits.
RE25907.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:33:02 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 1321443..1321946 | 214..717 | 98 | <- | Minus |
chr3L | 1322037..1322198 | 52..213 | 100 | <- | Minus |
chr3L | 1322248..1322298 | 1..51 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:05:04 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9184-RB | 1..639 | 21..659 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:41:59 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9184-RB | 1..639 | 21..659 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:42:33 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9184-RB | 1..639 | 21..659 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:30:45 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9184-RB | 1..639 | 21..659 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:35:06 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9184-RB | 1..639 | 21..659 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:51:29 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9184-RB | 1..717 | 1..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:41:58 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9184-RB | 1..717 | 1..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:42:33 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9184-RB | 5..721 | 1..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:30:45 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9184-RB | 1..717 | 1..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:35:06 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9184-RB | 5..721 | 1..717 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:33:02 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1321947..1322450 | 214..717 | 100 | <- | Minus |
3L | 1322541..1322702 | 52..213 | 100 | <- | Minus |
3L | 1322752..1322802 | 1..51 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:33:02 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1321947..1322450 | 214..717 | 100 | <- | Minus |
3L | 1322541..1322702 | 52..213 | 100 | <- | Minus |
3L | 1322752..1322802 | 1..51 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:33:02 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1321947..1322450 | 214..717 | 100 | <- | Minus |
3L | 1322541..1322702 | 52..213 | 100 | <- | Minus |
3L | 1322752..1322802 | 1..51 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:42:33 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1321947..1322450 | 214..717 | 100 | <- | Minus |
arm_3L | 1322541..1322702 | 52..213 | 100 | <- | Minus |
arm_3L | 1322752..1322802 | 1..51 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:03:18 Download gff for
RE25907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1321947..1322450 | 214..717 | 100 | <- | Minus |
3L | 1322541..1322702 | 52..213 | 100 | <- | Minus |
3L | 1322752..1322802 | 1..51 | 98 | | Minus |
RE25907.hyp Sequence
Translation from 2 to 658
> RE25907.hyp
VIPREIMDRRVTAIGLVILQLLVSGLCFQEKAPLQTSLVSGQARTEKQQQ
VLDDPLGSGRGIDEHLLKTIEDQQHPRQYGYPPQWSPGPPAYPPPPQRPW
GPPPPPGPPPPGPPPPPGPYYNPYYNGYNYYGGYGGYGYGGFGYPGFGGY
SGYPYYPFYRSSTAGEVDNQLPGADGLTSAAIPGVFQGRAVLSHQNFLDG
RNNANVVPLYHLLQMARA*
RE25907.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:17:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9184-PB | 212 | CG9184-PB | 1..212 | 7..218 | 1196 | 100 | Plus |
CG9184-PA | 242 | CG9184-PA | 1..242 | 7..218 | 1155 | 87.6 | Plus |
RE25907.pep Sequence
Translation from 20 to 658
> RE25907.pep
MDRRVTAIGLVILQLLVSGLCFQEKAPLQTSLVSGQARTEKQQQVLDDPL
GSGRGIDEHLLKTIEDQQHPRQYGYPPQWSPGPPAYPPPPQRPWGPPPPP
GPPPPGPPPPPGPYYNPYYNGYNYYGGYGGYGYGGFGYPGFGGYSGYPYY
PFYRSSTAGEVDNQLPGADGLTSAAIPGVFQGRAVLSHQNFLDGRNNANV
VPLYHLLQMARA*
RE25907.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:51:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF10064-PA | 205 | GF10064-PA | 127..205 | 134..212 | 198 | 67.5 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:51:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG14608-PA | 211 | GG14608-PA | 1..211 | 1..212 | 611 | 86.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:36:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9184-PB | 212 | CG9184-PB | 1..212 | 1..212 | 1196 | 100 | Plus |
CG9184-PA | 242 | CG9184-PA | 1..242 | 1..212 | 1155 | 87.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 19:51:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA21597-PA | 220 | GA21597-PA | 1..85 | 1..88 | 240 | 67.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:51:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM14222-PA | 205 | GM14222-PA | 1..205 | 1..212 | 981 | 93.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 19:51:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD13484-PA | 212 | GD13484-PA | 1..212 | 1..212 | 1033 | 96.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:51:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE20969-PA | 211 | GE20969-PA | 1..211 | 1..212 | 608 | 87.3 | Plus |