Clone RE26226 Report

Gene	Date	Evidence
Sxl-RG	2010-11-11	Gleaning Pick By Joe Carlson

Clone Sequence Records

RE26226.complete Sequence

2908 bp assembled on 2011-02-22

GenBank Submission: BT126091.1

> RE26226.complete
ACAGTGCTTTGTTGTTGCCGAAGAAGGAAAGTCGCGCAGTGAATTTTTTT
CTGCGCGCCTACAAGAACAGCTATAATAAGCACACACTTAAAAAAAACCC
CATAGGACTTAAGAGAGGAAAGCACAGTGAGCGTGCACACATGTAAAAAG
AGAAAGAGAGCAACAGCAATTTTAGTACAACACAAGAAAGTTGAACAGAG
GCAGAAGAGAAGTAACAGGAAAACAATAACAACGACAGCAGCAGGCCAGC
TGAGAGCGCTGAGCGCCAAAACAATTGAAGAGATCGATTGAATCTCGATC
ATCGTTCTTAACCTCAAGTCAACTGCAACTCACCTCATCATCCTTTTCCT
GTAAAACCGAAACTCACCTTCGATCGAGGGTGTAACTTTTGTTGATTCGA
AAAACACACTCCCAACTCTCAGGATATGTACGGCAACAATAATCCGGGTA
GTAACAATAATAATGGTGGTTATCCCCCATATGGCTACAACAACAAGTCG
AGTGGTGGGCGTGGATTTGGGATGTCCCATTCTCTGCCATCCGGAATGGA
TACAGAATTTTCATTTCCAAGTTCATCGTCGCGTCGTGGTTACAATGATT
TCCCCGGCTGCGGCGGCAGCGGCGGAAATGGTGGGAGTGCCAACAATTTA
GGGGGCGGCAACATGTGCCACCTGCCGCCGATGGCCAGCAACAACTCGCT
GAATAATCTCTGCGGATTGTCGCTGGGCAGCGGTGGTAGTGATGATCTCA
TGAACGATCCTCGGGCAAGCAACACCAACCTGATTGTCAACTACTTGCCC
CAGGACATGACCGATCGCGAGCTGTACGCCCTATTCAGAGCCATTGGACC
CATCAACACGTGCAGAATCATGCGAGACTATAAGACTGGCTACAGTTTTG
GTTATGCTTTCGTGGACTTCACATCGGAAATGGACTCGCAGCGTGCTATT
AAAGTGCTGAATGGCATCACAGTGCGCAACAAGCGGCTTAAGGTTTCCTA
TGCACGTCCCGGCGGAGAATCGATCAAGGACACCAATCTGTATGTGACCA
ATCTGCCGCGTACCATAACCGACGATCAGCTGGACACGATCTTCGGCAAG
TACGGTTCCATTGTGCAGAAGAACATCTTGCGTGACAAGCTCACAGGTCG
TCCTCGTGGTGTGGCCTTTGTTCGGTACAACAAGCGTGAGGAGGCCCAGG
AGGCCATTTCGGCGCTGAACAACGTAATACCCGAGGGCGGATCACAGCCG
CTGTCCGTCCGGTTGGCTGAGGAGCATGGCAAGGCGAAGGCGGCCCACTT
TATGTCGCAGATGGGCGTGGTTCCAGCAAATGTACCACCGCCGCCACCAC
AACCGCCAGCACATATGGCCGCCGCATTCAACATGATGCACAGAGGCGAA
AACTTTGCCGATTTGCTTGACGGATTGTACCGTAGGAAGTACCATTATCC
TTACTTATAATTGACACCGCAACAGCAGCAGCAACTACTACAACATCAGC
AGCAGGCGTTGGGCTTCACCAGTAGCTCCAATAATAGTATTGGCAATGGT
AATGGCAACGACAACAACATGCTACTTTACCACCAGCAATACCATCAACA
ACAAACACAACAACAACGCCTGGGCAATGTTGCTGCTCACAATATAAGTC
CAAATGGAAGCAATAATAACATTAACACGTCGAACACCAATAACATTAAC
TTCAATACAATACGTCAGAATGGAGTTGCTGCTCTTCACTATCTTCAGGA
ACAATTGCAATTGCAACAACCGCAGGATCAACAATCACAGCAACAGCAGC
CATTGACTATGCCATCTTCGCCGCCGTTTCAACAACAATCACGCCAATCA
CACCACAATGGCAGCAGTAGCACTCTGGGCAATCAGTTGCTTGCCATAAG
CAACAACAATAGCTTCAATAATAATTCCAATCAATCCAATAGTTTTACTG
GCAATTACAGCAACGGTAGCGCTTTTACCAGTAACGGTGCCATTAGCGGT
AGCAACTTTCCCAACAATCCCACAAGCAGTGGGAACTTCACCAACAACTC
AACAAACAGCAACCCCACAAACAGTGGACACTTTGCCAGTAATTTGGCTG
GCAGCAGCAACTTTACCAACCATCTTTCTGGCAGCAACAATTACACCAAC
AGCAACGGAAATTTCACCAGTAATGCAGCTAGCAGTAGCAACTTCTCCAA
CAATGCAGCTAGCAGCACCAATTACAGCAAGAACTGCAGCAGCGGCGTCG
TTGGAAACAGCGATCCCGACAGTTGTAGCAGAAAACACACCACCAACACT
AATAATCACCACACTTCGCCGCAGCACGACTTCAGTTTTAATATGTCAAC
GACTGAACAAGAACTGCATCAGCAGACACTCAAGTTGCAGCAGCTGCATC
TGAACAACAGCTTCAACAACACCACAGCAGCTGCAACAACTTCAGCGGCT
GCATCAACTTCCACTTCAACAACGGCAACGGCATCATCCACAAACTCCGC
AAATGTCGGATTTTTATGGCGTACATAACCAGAGAGTTGAGAAGCGTATG
ATGAAGGCAATCTTCAAATTAAAGATTATATATAAAAAGCTTATATATAT
AAAACTATGAATACCTTATATTGATCATCGTAGTATCAGCATTCATCGAA
ACCATATACAACAACTGAAACTTTTATGTTCTCAAACCACAAGAATTAAT
TTACTACTTTTTTTTTTTTTGTATGTTCCTCACTTTAACCCATATGTTGT
AGTTGGTTTTTTGTGCTTTTTTTTTGGGAGGAATCCTGTTGTAACTAGCT
CTAAGGCAAGACACGTATATGTATACAAATCATAAATAATTATATATATA
TACATATATATATATATATATATAAAGAATGAAAAATCGACGAAAAAAAA
AAAAAAAA

RE26226.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:45:05

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chrX	22417052	chrX	6969833..6971330	2892..1394	7430	99.9	Minus
chrX	22417052	chrX	6983637..6984086	502..53	2250	100	Minus
chrX	22417052	chrX	6977582..6977918	884..548	1685	100	Minus
chrX	22417052	chrX	6976561..6976783	1396..1174	1115	100	Minus
chrX	22417052	chrX	6977119..6977304	1176..991	930	100	Minus
chrX	22417052	chrX	6977371..6977482	994..883	560	100	Minus
chrX	22417052	chrX	6989975..6990027	53..1	250	98.1	Minus
chrX	22417052	chrX	6979576..6979624	549..501	245	100	Minus
chrX	22417052	chrX	1265596..1265702	773..879	205	79.4	Plus
chrX	22417052	chrX	1266395..1266531	1176..1312	205	76.6	Plus

Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:44:58

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23542271	X	7077869..7079369	2894..1394	7505	100	Minus
X	23542271	X	7091674..7092123	502..53	2250	100	Minus
X	23542271	X	7085619..7085955	884..548	1685	100	Minus
X	23542271	X	7084598..7084820	1396..1174	1115	100	Minus
X	23542271	X	7085156..7085341	1176..991	930	100	Minus
X	23542271	X	7085408..7085519	994..883	560	100	Minus
X	23542271	X	7098001..7098053	53..1	250	98.1	Minus
X	23542271	X	7087613..7087661	549..501	245	100	Minus
X	23542271	X	1371663..1371769	773..879	205	79.4	Plus
X	23542271	X	1372462..1372598	1176..1312	205	76.6	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:07:53

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23527363	X	7085967..7087467	2894..1394	7505	100	Minus
X	23527363	X	7099772..7100221	502..53	2250	100	Minus
X	23527363	X	7093717..7094053	884..548	1685	100	Minus
X	23527363	X	7092696..7092918	1396..1174	1115	100	Minus
X	23527363	X	7093254..7093439	1176..991	930	100	Minus
X	23527363	X	7093506..7093617	994..883	560	100	Minus
X	23527363	X	7106099..7106151	53..1	250	98.1	Minus
X	23527363	X	7095711..7095759	549..501	245	100	Minus
X	23527363	X	1379761..1379867	773..879	205	79.4	Plus

Blast to na_te.dros performed 2019-03-17 01:45:03

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2268..2899	1855..2501	415	56.7	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2297..3121	1459..2308	370	55.7	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2369..2686	2131..2459	339	59.9	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2307..2989	1581..2238	337	56.2	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2343..2873	1746..2263	326	56.5	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2295..2816	1989..2502	284	55.2	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6731..7036	1470..1793	279	59.2	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2295..2999	1757..2475	264	54	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2304..2540	2203..2457	259	61.9	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2406..2983	1470..2073	256	56.4	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6713..7025	2138..2464	251	58.1	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2499..2989	1470..1941	241	55.9	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6736..7096	2101..2457	234	56.9	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6752..6896	1470..1617	228	63.5	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6773..6914	1470..1617	222	63.5	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2752..2995	1429..1677	217	58.4	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6713..7033	2003..2335	215	55.9	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6794..7404	1470..2091	202	55.3	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2423..2981	1466..2017	184	53.8	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	7154..7425	2219..2483	180	56	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6639..6951	1908..2224	176	54.4	Plus
Dvir\Het-A	6610	Dvir\Het-A HETAVIR 6610bp	3280..3532	1459..1708	170	56.2	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2624..3199	1464..2062	169	54.1	Plus
Dyak\TART	8444	Dyak\TART TARTYAK 8444bp	6592..6690	1468..1568	166	65.3	Plus
TART-C	11124	TART-C TARTC 11124bp	8048..8146	1468..1568	166	65.3	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6740..6897	1746..1908	163	59.1	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6773..6900	1746..1872	160	59.4	Plus
roo	9092	roo DM_ROO 9092bp	1064..1169	2144..2249	151	65.1	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6761..6924	1746..1914	147	58.2	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6529..6950	1760..2195	144	52.8	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6827..6951	1470..1594	139	59.1	Plus
roo	9092	roo DM_ROO 9092bp	1130..1163	1467..1500	134	88.2	Plus
TART-B	10654	TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1).	120..176	2426..2482	132	70.2	Plus
TART-B	10654	TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1).	9150..9206	2426..2482	132	70.2	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2816..2967	1466..1617	131	57.1	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	1550..1587	1466..1503	127	81.6	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2447..2484	1466..1503	127	81.6	Plus
roo	9092	roo DM_ROO 9092bp	1111..1146	1469..1504	126	83.3	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	1530..1584	1746..1800	122	69.1	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6869..7019	1470..1614	119	58.2	Plus
roo	9092	roo DM_ROO 9092bp	1088..1160	1746..1816	117	64.4	Plus

RE26226.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:45:51 Download gff for RE26226.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chrX	6977373..6977480	885..992	100	<-	Minus
chrX	6969910..6970237	2487..2815	99	==	Minus
chrX	6970338..6970477	2247..2386	99	==	Minus
chrX	6970594..6971106	1618..2130	100	==	Minus
chrX	6971255..6971328	1396..1469	100	<-	Minus
chrX	6976562..6976782	1175..1395	100	<-	Minus
chrX	6977121..6977302	993..1174	100	<-	Minus
chrX	6977582..6977917	549..884	100	<-	Minus
chrX	6979577..6979622	503..548	100	<-	Minus
chrX	6983637..6984085	54..502	100	<-	Minus
chrX	6989975..6990027	1..53	98		Minus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-02-22 10:07:24 Download gff for RE26226.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Sxl-RH	1..973	426..1396	99	->	Plus
Sxl-RH	1038..1101	1397..1460	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:51:32 Download gff for RE26226.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Sxl-RY	1..120	426..545	100	<-	Plus
Sxl-RY	146..2127	546..2528	99		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 18:09:49 Download gff for RE26226.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Sxl-RY	1..120	426..545	100	<-	Plus
Sxl-RY	146..2127	546..2528	99		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-22 10:07:23 Download gff for RE26226.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG14425-RA	1..1398	1..1396	99	->	Plus
CG14425-RA	1463..2958	1397..2892	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:51:32 Download gff for RE26226.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Sxl-RW	1..2892	1..2892	99		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 18:09:49 Download gff for RE26226.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Sxl-RW	1..2892	1..2892	99		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:45:51 Download gff for RE26226.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	7077871..7079367	1396..2892	100	<-	Minus
X	7084599..7084819	1175..1395	100	<-	Minus
X	7085158..7085339	993..1174	100	<-	Minus
X	7085410..7085517	885..992	100	<-	Minus
X	7085619..7085954	549..884	100	<-	Minus
X	7087614..7087659	503..548	100	<-	Minus
X	7091674..7092122	54..502	100	<-	Minus
X	7098001..7098053	1..53	98		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:45:51 Download gff for RE26226.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	7077871..7079367	1396..2892	100	<-	Minus
X	7084599..7084819	1175..1395	100	<-	Minus
X	7085158..7085339	993..1174	100	<-	Minus
X	7085410..7085517	885..992	100	<-	Minus
X	7085619..7085954	549..884	100	<-	Minus
X	7087614..7087659	503..548	100	<-	Minus
X	7091674..7092122	54..502	100	<-	Minus
X	7098001..7098053	1..53	98		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:45:51 Download gff for RE26226.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	7077871..7079367	1396..2892	100	<-	Minus
X	7084599..7084819	1175..1395	100	<-	Minus
X	7085158..7085339	993..1174	100	<-	Minus
X	7085410..7085517	885..992	100	<-	Minus
X	7085619..7085954	549..884	100	<-	Minus
X	7087614..7087659	503..548	100	<-	Minus
X	7091674..7092122	54..502	100	<-	Minus
X	7098001..7098053	1..53	98		Minus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:51:32 Download gff for RE26226.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_X	6971904..6973400	1396..2892	100	<-	Minus
arm_X	6978632..6978852	1175..1395	100	<-	Minus
arm_X	6979191..6979372	993..1174	100	<-	Minus
arm_X	6979443..6979550	885..992	100	<-	Minus
arm_X	6979652..6979987	549..884	100	<-	Minus
arm_X	6981647..6981692	503..548	100	<-	Minus
arm_X	6985707..6986155	54..502	100	<-	Minus
arm_X	6992034..6992086	1..53	98		Minus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:59:54 Download gff for RE26226.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	7085969..7087465	1396..2892	100	<-	Minus
X	7092697..7092917	1175..1395	100	<-	Minus
X	7093717..7094052	549..884	100	<-	Minus
X	7095712..7095757	503..548	100	<-	Minus
X	7099772..7100220	54..502	100	<-	Minus
X	7106099..7106151	1..53	98		Minus
X	7093508..7093615	885..992	100	<-	Minus
X	7093256..7093437	993..1174	100	<-	Minus

RE26226.hyp Sequence

Translation from 425 to 1459

> RE26226.hyp
MYGNNNPGSNNNNGGYPPYGYNNKSSGGRGFGMSHSLPSGMDTEFSFPSS
SSRRGYNDFPGCGGSGGNGGSANNLGGGNMCHLPPMASNNSLNNLCGLSL
GSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMR
DYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESI
KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVR
YNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVP
ANVPPPPPQPPAHMAAAFNMMHRGENFADLLDGLYRRKYHYPYL*

RE26226.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:58:51

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Sxl-PW	344	CG43770-PW	1..344	1..344	1844	100	Plus
Sxl-PP	352	CG43770-PP	1..352	1..344	1825	97.7	Plus
Sxl-PY	708	CG43770-PY	1..352	1..344	1825	97.7	Plus
Sxl-PH	366	CG43770-PH	1..366	1..344	1805	93.7	Plus
Sxl-PX	722	CG43770-PX	1..366	1..344	1805	93.7	Plus

RE26226.pep Sequence

Translation from 425 to 1459

> RE26226.pep
MYGNNNPGSNNNNGGYPPYGYNNKSSGGRGFGMSHSLPSGMDTEFSFPSS
SSRRGYNDFPGCGGSGGNGGSANNLGGGNMCHLPPMASNNSLNNLCGLSL
GSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMR
DYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESI
KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVR
YNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVP
ANVPPPPPQPPAHMAAAFNMMHRGENFADLLDGLYRRKYHYPYL*

RE26226.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:52:41

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF20968-PA	379	GF20968-PA	16..379	16..344	1302	82.4	Plus
Dana\GF21012-PA	757	GF21012-PA	104..287	113..296	784	78.8	Plus
Dana\GF18529-PA	417	GF18529-PA	139..311	114..286	439	48	Plus
Dana\GF14992-PA	660	GF14992-PA	95..267	111..281	424	43.8	Plus
Dana\GF21392-PA	353	GF21392-PA	15..205	104..281	415	42	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:52:42

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG17637-PA	335	GG17637-PA	1..335	33..344	1558	90.4	Plus
Dere\GG12847-PA	513	GG12847-PA	97..280	113..296	785	78.8	Plus
Dere\GG24901-PA	446	GG24901-PA	109..281	111..281	416	43.8	Plus
Dere\GG12756-PA	466	GG12756-PA	132..314	104..285	415	42.1	Plus
Dere\GG17743-PA	353	GG17743-PA	15..205	104..281	412	41.5	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:52:43

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH24172-PA	365	GH24172-PA	16..365	16..344	1419	82.5	Plus
Dgri\GH12116-PA	918	GH12116-PA	177..358	111..292	743	75.8	Plus
Dgri\GH13638-PA	726	GH13638-PA	110..277	111..281	433	44.4	Plus
Dgri\GH24423-PA	353	GH24423-PA	15..205	104..281	412	41.5	Plus
Dgri\GH12602-PA	511	GH12602-PA	162..359	102..285	393	38.9	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:25

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Sxl-PW	344	CG43770-PW	1..344	1..344	1844	100	Plus
Sxl-PY	708	CG43770-PY	1..352	1..344	1825	97.7	Plus
Sxl-PP	352	CG43770-PP	1..352	1..344	1825	97.7	Plus
Sxl-PX	722	CG43770-PX	1..366	1..344	1805	93.7	Plus
Sxl-PH	366	CG43770-PH	1..366	1..344	1805	93.7	Plus
Sxl-PJ	346	CG43770-PJ	1..326	1..326	1732	99.4	Plus
Sxl-PG	346	CG43770-PG	1..326	1..326	1732	99.4	Plus
Sxl-PT	354	CG43770-PT	1..334	1..326	1713	97	Plus
Sxl-PD	354	CG43770-PD	1..334	1..326	1713	97	Plus
Sxl-PL	354	CG43770-PL	1..334	1..326	1713	97	Plus
Sxl-PR	342	CG43770-PR	18..342	21..344	1697	99.1	Plus
Sxl-PO	364	CG43770-PO	18..364	21..344	1658	92.5	Plus
Sxl-PC	344	CG43770-PC	18..324	21..326	1585	98.4	Plus
Sxl-PN	344	CG43770-PN	18..324	21..326	1585	98.4	Plus
Sxl-PAC	331	CG43770-PAC	4..311	27..326	1558	96.8	Plus
Sxl-PE	314	CG43770-PE	1..294	33..326	1542	99.3	Plus
Sxl-PA	314	CG43770-PA	1..294	33..326	1542	99.3	Plus
Sxl-PAB	322	CG43770-PAB	1..302	33..326	1523	96.7	Plus
ssx-PE	443	CG3056-PE	48..296	64..313	786	63.4	Plus
ssx-PB	443	CG3056-PB	48..296	64..313	786	63.4	Plus
ssx-PD	485	CG3056-PD	48..296	64..313	786	63.4	Plus
Rbp9-PH	439	CG3151-PH	18..281	25..288	446	34.5	Plus
Rbp9-PG	439	CG3151-PG	18..281	25..288	446	34.5	Plus
Rbp9-PF	439	CG3151-PF	18..281	25..288	446	34.5	Plus
Rbp9-PE	439	CG3151-PE	18..281	25..288	446	34.5	Plus
Rbp9-PJ	684	CG3151-PJ	18..281	25..288	446	34.5	Plus
Rbp9-PK	444	CG3151-PK	18..286	25..288	430	33.8	Plus
Rbp9-PI	444	CG3151-PI	18..286	25..288	430	33.8	Plus
Rbp9-PB	444	CG3151-PB	18..286	25..288	430	33.8	Plus
Rbp9-PC	444	CG3151-PC	18..286	25..288	430	33.8	Plus
fne-PJ	353	CG4396-PJ	13..214	102..290	406	39.7	Plus
fne-PI	353	CG4396-PI	13..214	102..290	406	39.7	Plus
fne-PD	353	CG4396-PD	13..214	102..290	406	39.7	Plus
fne-PE	356	CG4396-PE	13..217	102..290	403	39.1	Plus
fne-PH	356	CG4396-PH	13..217	102..290	403	39.1	Plus
fne-PG	356	CG4396-PG	13..217	102..290	403	39.1	Plus
fne-PB	356	CG4396-PB	13..217	102..290	403	39.1	Plus
fne-PA	356	CG4396-PA	13..217	102..290	403	39.1	Plus
fne-PC	356	CG4396-PC	13..217	102..290	403	39.1	Plus
elav-PC	479	CG4262-PC	118..327	84..285	382	37.5	Plus
elav-PB	479	CG4262-PB	118..327	84..285	382	37.5	Plus
elav-PA	483	CG4262-PA	122..331	84..285	382	37.5	Plus
elav-PD	483	CG4262-PD	122..331	84..285	382	37.5	Plus
CG5213-PA	251	CG5213-PA	41..231	117..307	355	38.7	Plus
shep-PA	578	CG32423-PA	180..394	65..288	229	30.2	Plus
shep-PF	590	CG32423-PF	192..406	65..288	229	30.2	Plus
shep-PE	379	CG32423-PE	19..195	115..288	225	35.2	Plus
shep-PG	379	CG32423-PG	19..195	115..288	225	35.2	Plus
shep-PH	371	CG32423-PH	19..193	115..288	222	35.4	Plus
shep-PI	377	CG32423-PI	19..193	115..288	222	35.4	Plus
shep-PB	499	CG32423-PB	85..308	65..288	222	30.6	Plus
Rbp9-PH	439	CG3151-PH	84..264	4..185	155	29.3	Plus
Rbp9-PG	439	CG3151-PG	84..264	4..185	155	29.3	Plus
Rbp9-PF	439	CG3151-PF	84..264	4..185	155	29.3	Plus
Rbp9-PE	439	CG3151-PE	84..264	4..185	155	29.3	Plus
Rbp9-PJ	684	CG3151-PJ	84..264	4..185	155	29.3	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:52:44

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI21573-PA	367	GI21573-PA	16..367	16..344	1429	83.6	Plus
Dmoj\GI16327-PA	716	GI16327-PA	246..443	113..314	770	75.2	Plus
Dmoj\GI11879-PA	724	GI11879-PA	121..293	111..281	422	43.8	Plus
Dmoj\GI16282-PA	353	GI16282-PA	13..205	102..281	412	41	Plus
Dmoj\GI10157-PA	356	GI10157-PA	31..196	117..282	390	45.2	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:52:44

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL26885-PA	377	GL26885-PA	16..377	16..344	1346	83	Plus
Dper\GL14245-PA	618	GL14245-PA	113..299	110..296	740	72.2	Plus
Dper\GL26299-PA	678	GL26299-PA	107..274	111..281	437	45	Plus
Dper\GL22975-PA	385	GL22975-PA	15..205	104..281	412	41.5	Plus
Dper\GL20165-PA	496	GL20165-PA	153..344	101..285	386	39.2	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:52:45

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA22653-PA	377	GA22653-PA	16..377	16..344	1346	83	Plus
Dpse\GA22715-PA	672	GA22715-PA	113..298	110..295	738	72.6	Plus
Dpse\GA28809-PA	692	GA28809-PA	116..288	111..281	420	43.8	Plus
Dpse\GA22283-PA	353	GA22283-PA	15..205	104..281	411	41.5	Plus
Dpse\GA18065-PA	496	GA18065-PA	153..344	101..285	386	39.2	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:52:46

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\Sxl-PA	301	GM17480-PA	1..290	1..290	1490	98.3	Plus
Dsec\GM19131-PA	488	GM19131-PA	89..272	113..296	779	78.8	Plus
Dsec\GM18380-PA	650	GM18380-PA	313..485	111..281	417	43.8	Plus
Dsec\GM19036-PA	466	GM19036-PA	132..314	104..285	415	42.1	Plus
Dsec\GM11591-PA	379	GM11591-PA	41..231	104..281	405	40.9	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:52:47

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\Sxl-PA	301	GD16165-PA	1..301	1..344	1363	80.2	Plus
Dsim\GD16553-PA	226	GD16553-PA	89..226	113..250	573	77.5	Plus
Dsim\GD16475-PA	466	GD16475-PA	132..314	104..285	415	42.1	Plus
Dsim\GD17091-PA	371	GD17091-PA	13..219	102..292	412	39.2	Plus
Dsim\GD23195-PA	464	GD23195-PA	312..460	111..257	369	45.4	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:52:48

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\Sxl-PA	368	GJ16698-PA	16..368	16..344	1437	83.6	Plus
Dvir\ssx-PA	428	GJ15667-PA	26..197	126..297	722	79.7	Plus
Dvir\GJ13991-PA	725	GJ13991-PA	99..271	111..281	423	43.8	Plus
Dvir\GJ16518-PA	353	GJ16518-PA	15..205	104..281	412	41.5	Plus
Dvir\GJ10859-PA	388	GJ10859-PA	23..194	111..282	394	47.1	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:52:49

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK16445-PA	373	GK16445-PA	16..373	16..344	1423	84.8	Plus
Dwil\GK16696-PA	508	GK16696-PA	106..292	111..297	776	77	Plus
Dwil\GK14865-PA	725	GK14865-PA	118..290	111..281	418	43.8	Plus
Dwil\GK25647-PA	353	GK25647-PA	15..205	104..281	412	41.5	Plus
Dwil\GK16120-PA	509	GK16120-PA	160..357	102..285	394	38.9	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:52:50

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE17544-PA	335	GE17544-PA	1..335	33..344	1558	90.4	Plus
Dyak\GE16683-PA	563	GE16683-PA	109..292	113..296	779	78.8	Plus
Dyak\GE18193-PA	446	GE18193-PA	109..281	111..281	417	43.8	Plus
Dyak\fne-PA	353	GE17033-PA	15..205	104..281	412	41.5	Plus
Dyak\GE16581-PA	478	GE16581-PA	131..326	104..285	390	39.3	Plus

Library:	RE
Tissue Source:	Drosophila melanogaster embryo
Created by:	Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:	2000-10-23
Comments:	Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:	262
Well:	26
Vector:	pFlc-1
Associated Gene/Transcript	Sxl-RW
Protein status:	RE26226.pep: gold
Sequenced Size:	2908

Clone RE26226 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

RE26226.complete Sequence

RE26226.complete Blast Records

RE26226.complete Sim4 Records

RE26226.hyp Sequence

RE26226.hyp Blast Records

RE26226.pep Sequence

RE26226.pep Blast Records