BDGP Sequence Production Resources |
Search the DGRC for RE26232
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 262 |
Well: | 32 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG17036-RA |
Protein status: | RE26232.pep: gold |
Sequenced Size: | 1682 |
Gene | Date | Evidence |
---|---|---|
CG17036 | 2007-09-25 | DGC5 pick |
CG17036 | 2008-04-29 | Release 5.5 accounting |
CG17036 | 2008-04-29 | Picked prior to 5.5 |
CG17036 | 2008-08-15 | Release 5.9 accounting |
CG17036 | 2008-12-18 | 5.12 accounting |
1682 bp assembled on 2007-12-12
GenBank Submission: BT031341
> RE26232.complete GGTTGCCGGCTGGCGTTCATCGCGTTGGTTACGACACTTATCAATTGGCG AAACAACTGGCGCCGGATTGGAGCTTGGAGTTTCGAGTCTCCATGCGAAC AGCCCACCTGGTATCGCAATTTACGACATGAAGAGCTGGCTGAAGATCTC GCTGCTGCTGTGCACGTTTGGCTTTTTCCGGGAGTTTCGACCTTCGGAGC CGTACGTCACAGAGTACCTAGCCTCGGATTATGGCAACCTGACGACGGAT CAAATCTATCAGGATGTGTATCCCTTCGGCACGTACTCGGTGCTGGCCCA GCTGGTAATTGTGTTCCTCATCACAGATCTGGTGAGGTACAAACCGGTTA TCGTGCTATCGGCACTGGCTGGCATTACCCTGTTCTCCATGCTTATCTGG ACGGAAACCGTGGGAATGCTGCAGGTGGCCCAAGTGTTTTTTGGCACCTT TACGGCCGCTGAGGTGGCCTACTACACGTACATGTACGCCAAGGTCAACA AGGAGCAGTATCAGGTAGTCACGGGCCACACGCGAGCTGCCATCTTGAGC GGCAAGTTCCTCGGCGGCCTGTTTGCCCAGATTTTGGTGTCCACCGATAG CATGGATTACCGGCAGCTGCACTACCTCTCGCTGGCCACGCAGCTAATCT CCCTGGCCGTGTCCCTGTTCCTGCCCAGTGTGCCGCGTAGCCTCTACTTC TACGCGGGTTCCGAGAAGATTACCATTGCCGACGGAGAAGAGACCTCACC AAAGTTCTCCTTTGCCAACGCATGCCGCCTGCTGTGGTACCACCTCGTTA GTTCCTACTCCAATCCCGTCGTGCTGCAGTGGAGCATATGGTGGGCATTG GCCACCTGTGGTCAAGTTCAAGTGATCTCCTACATCCAGTTCCTGTGGAA AGAGGTGGCACCGAATAAGCTCAGTGTTTACAATGGCGGAGTGGAGGCCG TGGCCACGCTGCTGGGTGCTATTGGAGCCATTCTGGCGGGCCTGCTGAAC TCCAATAAGCGACGGGGATCGTATATGATGGGCATATCCATCTGTGCCGC TGCCCTGGGCGCTCTGCTCATCTATGCCGCCAAGACGCAGTTGATCTGGG TGGCCTACGTGAACTATGTGCTTTTCTGCACCGTATTCTTCTTCATCATC ACGGTGGCGGGTGCCGTGGTGGCCGAGAATCTGGTGGAGGACAGTTTCGG CTTGATCTTCGGTATCAATACGTTGGTGGGTCTGATCCTGCAGACTATTC TGACCGTTGCGGTTGTGGAGCGAGTTGGATTCGCTCTGGAGCCGCGGGAT CAGTACGTGGTTTACGGTAGCTACTTTGTGGTCTTGGGTGGAATATCCAT AATTGGGTCTATCTGCGTGAAACTGTTTTGCAGGACTAACAAGTCGAGTG TGGAAAATGTGGTTTCTTTAACATAAGATAATATAGGATTTTACACAAAT CAAAACAGGACGAAATGTGCAAGTTTGTAAATACAGGACTTCTTATTTAC TATCTTATTTATTCAAACAACATAGTATATAAGAAATTCCATCAATTAAA CAAACTAGTACAAAGGTAAAAAGTTAAATCAGTTGTTGAGCAAAGAATTT GCTTTCCATAAAGTTAAACTTTACAGAAATAAAACATAAATGAAAGTCTA AGCTACTATTAAAAAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17036-RA | 1835 | CG17036-RA | 171..1832 | 2..1663 | 8295 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 12697603..12697723 | 1546..1666 | 98 | -> | Minus |
chr2L | 12697740..12698412 | 872..1545 | 99 | <- | Minus |
chr2L | 12698477..12699346 | 1..871 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17036-RA | 1..1299 | 128..1426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17036-RA | 1..1299 | 128..1426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17036-RA | 1..1299 | 128..1426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17036-RA | 1..1299 | 128..1426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17036-RA | 1..1299 | 128..1426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17036-RA | 106..1622 | 1..1517 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17036-RA | 106..1622 | 1..1517 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17036-RA | 4..1663 | 1..1660 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17036-RA | 106..1622 | 1..1517 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17036-RA | 4..1663 | 1..1660 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12698912..12699706 | 872..1666 | 99 | <- | Minus |
2L | 12699771..12700640 | 1..871 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12698912..12699706 | 872..1666 | 99 | <- | Minus |
2L | 12699771..12700640 | 1..871 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12698912..12699706 | 872..1666 | 99 | <- | Minus |
2L | 12699771..12700640 | 1..871 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 12698912..12699706 | 872..1666 | 99 | <- | Minus |
arm_2L | 12699771..12700640 | 1..871 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12698912..12699706 | 872..1666 | 99 | <- | Minus |
2L | 12699771..12700640 | 1..871 | 99 | Minus |
Translation from 0 to 1425
> RE26232.hyp VAGWRSSRWLRHLSIGETTGAGLELGVSSLHANSPPGIAIYDMKSWLKIS LLLCTFGFFREFRPSEPYVTEYLASDYGNLTTDQIYQDVYPFGTYSVLAQ LVIVFLITDLVRYKPVIVLSALAGITLFSMLIWTETVGMLQVAQVFFGTF TAAEVAYYTYMYAKVNKEQYQVVTGHTRAAILSGKFLGGLFAQILVSTDS MDYRQLHYLSLATQLISLAVSLFLPSVPRSLYFYAGSEKITIADGEETSP KFSFANACRLLWYHLVSSYSNPVVLQWSIWWALATCGQVQVISYIQFLWK EVAPNKLSVYNGGVEAVATLLGAIGAILAGLLNSNKRRGSYMMGISICAA ALGALLIYAAKTQLIWVAYVNYVLFCTVFFFIITVAGAVVAENLVEDSFG LIFGINTLVGLILQTILTVAVVERVGFALEPRDQYVVYGSYFVVLGGISI IGSICVKLFCRTNKSSVENVVSLT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17036-PB | 432 | CG17036-PB | 1..432 | 43..474 | 2192 | 100 | Plus |
CG17036-PA | 432 | CG17036-PA | 1..432 | 43..474 | 2192 | 100 | Plus |
CG6574-PA | 444 | CG6574-PA | 1..434 | 43..463 | 995 | 45.2 | Plus |
CG14694-PA | 446 | CG14694-PA | 1..429 | 43..458 | 915 | 44.1 | Plus |
Translation from 127 to 1425
> RE26232.pep MKSWLKISLLLCTFGFFREFRPSEPYVTEYLASDYGNLTTDQIYQDVYPF GTYSVLAQLVIVFLITDLVRYKPVIVLSALAGITLFSMLIWTETVGMLQV AQVFFGTFTAAEVAYYTYMYAKVNKEQYQVVTGHTRAAILSGKFLGGLFA QILVSTDSMDYRQLHYLSLATQLISLAVSLFLPSVPRSLYFYAGSEKITI ADGEETSPKFSFANACRLLWYHLVSSYSNPVVLQWSIWWALATCGQVQVI SYIQFLWKEVAPNKLSVYNGGVEAVATLLGAIGAILAGLLNSNKRRGSYM MGISICAAALGALLIYAAKTQLIWVAYVNYVLFCTVFFFIITVAGAVVAE NLVEDSFGLIFGINTLVGLILQTILTVAVVERVGFALEPRDQYVVYGSYF VVLGGISIIGSICVKLFCRTNKSSVENVVSLT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15658-PA | 427 | GF15658-PA | 1..426 | 1..427 | 1720 | 76.8 | Plus |
Dana\GF16177-PA | 443 | GF16177-PA | 1..440 | 1..427 | 905 | 44.5 | Plus |
Dana\GF16180-PA | 409 | GF16180-PA | 1..399 | 1..382 | 851 | 44.1 | Plus |
Dana\GF16179-PA | 443 | GF16179-PA | 1..424 | 1..404 | 829 | 39.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10243-PA | 432 | GG10243-PA | 1..432 | 1..432 | 2079 | 92.4 | Plus |
Dere\GG17259-PA | 444 | GG17259-PA | 1..444 | 1..430 | 926 | 45.7 | Plus |
Dere\GG17260-PA | 445 | GG17260-PA | 1..419 | 1..404 | 904 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10121-PA | 429 | GH10121-PA | 1..428 | 1..424 | 1482 | 67.8 | Plus |
Dgri\GH18741-PA | 450 | GH18741-PA | 1..449 | 1..431 | 944 | 44.7 | Plus |
Dgri\GH18742-PA | 447 | GH18742-PA | 4..441 | 3..427 | 877 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17036-PB | 432 | CG17036-PB | 1..432 | 1..432 | 2192 | 100 | Plus |
CG17036-PA | 432 | CG17036-PA | 1..432 | 1..432 | 2192 | 100 | Plus |
CG6574-PA | 444 | CG6574-PA | 1..434 | 1..421 | 995 | 45.2 | Plus |
CG14694-PA | 446 | CG14694-PA | 1..429 | 1..416 | 915 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14499-PA | 433 | GI14499-PA | 1..429 | 1..423 | 1531 | 69 | Plus |
Dmoj\GI24657-PA | 437 | GI24657-PA | 1..428 | 1..423 | 946 | 46.7 | Plus |
Dmoj\GI24658-PA | 442 | GI24658-PA | 3..428 | 2..409 | 862 | 46.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19735-PA | 432 | GL19735-PA | 1..426 | 1..424 | 1664 | 74.9 | Plus |
Dper\GL19736-PA | 426 | GL19736-PA | 1..424 | 1..422 | 1660 | 75.3 | Plus |
Dper\GL12063-PA | 453 | GL12063-PA | 1..453 | 1..430 | 872 | 42.2 | Plus |
Dper\GL12064-PA | 450 | GL12064-PA | 1..450 | 1..426 | 845 | 44.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14288-PA | 432 | GA14288-PA | 1..426 | 1..424 | 1665 | 74.9 | Plus |
Dpse\GA28920-PA | 426 | GA28920-PA | 1..424 | 1..422 | 1653 | 74.8 | Plus |
Dpse\GA19694-PA | 453 | GA19694-PA | 1..453 | 1..430 | 874 | 42.4 | Plus |
Dpse\GA13183-PA | 450 | GA13183-PA | 1..423 | 1..404 | 848 | 45.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26031-PA | 432 | GM26031-PA | 1..432 | 1..432 | 2160 | 95.6 | Plus |
Dsec\GM26143-PA | 444 | GM26143-PA | 1..441 | 1..427 | 940 | 45.2 | Plus |
Dsec\GM26144-PA | 446 | GM26144-PA | 1..438 | 1..422 | 899 | 43.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22102-PA | 432 | GD22102-PA | 1..432 | 1..432 | 2167 | 95.6 | Plus |
Dsim\GD20696-PA | 444 | GD20696-PA | 1..441 | 1..427 | 934 | 44.5 | Plus |
Dsim\GD20697-PA | 446 | GD20697-PA | 1..438 | 1..422 | 879 | 43.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16277-PA | 398 | GJ16277-PA | 1..383 | 1..380 | 1400 | 71 | Plus |
Dvir\GJ24031-PA | 457 | GJ24031-PA | 1..452 | 1..427 | 921 | 44.3 | Plus |
Dvir\GJ24032-PA | 441 | GJ24032-PA | 4..441 | 3..420 | 893 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14666-PA | 438 | GK14666-PA | 1..433 | 1..423 | 1578 | 71.8 | Plus |
Dwil\GK13288-PA | 431 | GK13288-PA | 1..431 | 1..429 | 947 | 45.6 | Plus |
Dwil\GK13289-PA | 449 | GK13289-PA | 4..441 | 3..401 | 797 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12099-PA | 432 | GE12099-PA | 1..432 | 1..432 | 2088 | 92.6 | Plus |
Dyak\GE24660-PA | 444 | GE24660-PA | 1..441 | 1..427 | 925 | 45.1 | Plus |
Dyak\GE24661-PA | 446 | GE24661-PA | 1..438 | 1..422 | 898 | 43.5 | Plus |