BDGP Sequence Production Resources |
Search the DGRC for RE26319
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 263 |
Well: | 19 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14866-RA |
Protein status: | RE26319.pep: gold |
Preliminary Size: | 1137 |
Sequenced Size: | 1774 |
Gene | Date | Evidence |
---|---|---|
CG14866 | 2001-12-14 | Blastp of sequenced clone |
CG14866 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14866 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14866 | 2008-04-29 | Release 5.5 accounting |
CG14866 | 2008-08-15 | Release 5.9 accounting |
CG14866 | 2008-12-18 | 5.12 accounting |
1774 bp (1774 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071219
> RE26319.complete AGTCGTGGTTTTCAGCTCGACCCAAGCGAACGGACGTCTTTGAACAGCGG ACGCGGCATAAACCGCACGGAAAACGCAACGAAATCGAAAGTGTTCACCA CGCGACTGGAATCGCCAAGTGCTTAGCGAGGCGGGGGCAATATACCCATC CGTAAACATTACGTGTCACCATGCCGCCGGCTGGTCAACAACTCCGGCTT ACGGCCCTTGTTTATCTGGCATTAGGTATTGCACTCTTATGCAATGGCAG CGATGGTGAAACTAGGCAAAAATACGCCAATGAATCACTCGCGGACGCAG ACGATCCATCTCCAGTTTGGTCGCAATTTCTCGAAGATTACGTCTTGAGG TATGGTTACAGGAGGCTAGGCTAGGGCAACACACTCATCCAGATCTTCCC ACGCGTCTGTCTTACATATAGCCAAGGCAGCAGTAGCAGCGGCAGCCAGC GAAAGTCCAAAGACCTGCCTTATATGGGCGCGGACATGGGCATCAATGGA CCGCTCAGCTATCACTCGTCCGCCTACAAGCGACCCGGCAACAATATCTA CATCACCAGGAGAATTGGCGAGGCGGTGGAACTAGAGCCGCATCTGCGAA AGCCCGTGGAGAGCCAGAGTCCCATTGTGAATCCTCAGTTCCGACCCATG ACCAATCAAATGTTGCACCAGCAACACCAACAGATGCAGCAACAACAGCA ACAGCAACAGTTGCAGCAACGCCAGCAACCGGGTTTCCTGCAGCAGCTCT TTGGCATAGGTGGCAGTGGTGGTGGTGGTGGTAGCGGTACCCAGCAACAG CAACATGTGCGACCAGTGCCGCTGCAACAGCAGCAAGTGCAACAGATAGC GCAGCAACACCCGCAACAGCAACATCTTGTGGGCGGTCAGCCGACCACAT TCCGAGCTGTCTCCGAAAATGATCTTTATCTCTTGGGAGCCATTGAAAAG TTGGTGTATCGAGTGGATTACCTGGAGAGTCGCGTGCGGCGCTCGGAGCA GCTGATCTACTATCTGATGGCCGGAAACAATCAGAAGGAGGTGAAGGATC CCTGTCCCGCGAACTTCACGCGCATCAGCGACAACTGCTACTACATCAAC AGCCAGCAGCAGGTGAACTGGAAGACGGCAAACTCTGCCTGCAAGGGTCT AAACTCCCACCTGGCCGAGTTCGAGAAGGTCTCGGAGAATGAGGAGATCA TGGCCTATCTGCTGAATCAGCCGACGCATCGTGGTCGCGATTACTGGCTG GGCGGTCTCAATCCTGGCCTCCTCTGGATCTGGTCCAATTCGGCTAAGCC GGTGAATCCCAACATGAATCTCACATCCATTGCGATGGCCCAGAAGGGGG AGAACTCGACGGCCGCCAATCTGGTGGACAGTTCGGAGCAGGCGGCAGAG GAGGCGACCGGCGAGGATGTGCTGAACAACACGGTGCAAATAGAGGGCAA GGGTCGCTGCCTACGGCTAAGTTACAATGCCGGAAAGCACAGCTATGTGT ACTACGGACAGGAGTGCACCTCGCGGCACTACTACATCTGCGAGCACGAG GACAAGACGCTGGACAACAAGATCAAGAAGATCACCCGCGAGCTGAAGCT GTTCGAGTGAGGATGGGATGCAACCCATTCCGATCCTCATGTGATACTTC AAGTTACCTAGCCATATATCGCATAATTTCAAATGAATTTATTCTTGTGT TACACATTAAATATTTATAAATATTTATACAATTAATAAACATACCGGAT AGTTTTCGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14866-RA | 1791 | CG14866-RA | 30..1790 | 1..1761 | 8790 | 99.9 | Plus |
CG14866.a | 1823 | CG14866.a | 481..1822 | 420..1761 | 6695 | 99.9 | Plus |
CG14866.b | 1916 | CG14866.b | 574..1915 | 420..1761 | 6695 | 99.9 | Plus |
CG14866.a | 1823 | CG14866.a | 134..482 | 1..349 | 1745 | 100 | Plus |
CG14866.b | 1916 | CG14866.b | 227..575 | 1..349 | 1745 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 15057304..15058269 | 1..966 | 4830 | 100 | Plus |
3R | 31820162 | 3R | 15058325..15059120 | 966..1761 | 3965 | 99.8 | Plus |
X | 23527363 | X | 11852404..11852468 | 729..665 | 190 | 86.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6923 | 665..834 | 248 | 62.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6938 | 686..891 | 235 | 59.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2483..2686 | 665..877 | 199 | 58.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2622..2691 | 666..735 | 179 | 72.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6782..6864 | 792..871 | 174 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6824 | 792..876 | 173 | 67.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2311..2409 | 783..876 | 168 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2391 | 792..876 | 166 | 68.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..6845 | 792..876 | 164 | 65.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1079..1164 | 792..877 | 160 | 65.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6797..6881 | 792..876 | 156 | 68.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2376..2463 | 792..876 | 153 | 67 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2376 | 805..876 | 151 | 70.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6797 | 809..876 | 150 | 70.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2861 | 792..869 | 140 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6776 | 819..876 | 130 | 72.4 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3259..3336 | 790..873 | 127 | 65.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1072..1130 | 818..876 | 124 | 67.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2358 | 824..876 | 121 | 69.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6503..6617 | 1037..1153 | 121 | 57.3 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3300..3381 | 792..874 | 116 | 63.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1097..1173 | 792..874 | 113 | 63.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11141100..11141763 | 1..664 | 100 | == | Plus |
chr3R | 11141827..11142065 | 728..966 | 87 | -> | Plus |
chr3R | 11142122..11142912 | 967..1758 | 95 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14866-RB | 1..167 | 171..337 | 100 | == | Plus |
CG14866-RB | 168..1368 | 412..1610 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14866-RB | 1..167 | 171..337 | 100 | == | Plus |
CG14866-RB | 168..1368 | 412..1610 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14866-RB | 1..167 | 171..337 | 100 | == | Plus |
CG14866-RB | 168..1368 | 412..1610 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14866-RB | 1..167 | 171..337 | 100 | == | Plus |
CG14866-RB | 168..1368 | 412..1610 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14866-RB | 1..167 | 171..337 | 100 | == | Plus |
CG14866-RB | 168..1368 | 412..1610 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14866-RA | 1..1757 | 1..1758 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14866-RA | 1..1757 | 1..1758 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14866-RA | 3..1759 | 1..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14866-RA | 1..1757 | 1..1758 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14866-RA | 3..1759 | 1..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15316473..15317438 | 1..966 | 100 | -> | Plus |
3R | 15317495..15318285 | 967..1758 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15316473..15317438 | 1..966 | 100 | -> | Plus |
3R | 15317495..15318285 | 967..1758 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15316473..15317438 | 1..966 | 100 | -> | Plus |
3R | 15317495..15318285 | 967..1758 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11143217..11144007 | 967..1758 | 99 | Plus | |
arm_3R | 11142195..11143160 | 1..966 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15057304..15058269 | 1..966 | 100 | -> | Plus |
3R | 15058326..15059116 | 967..1758 | 99 | Plus |
Translation from 473 to 1609
> RE26319.pep MGADMGINGPLSYHSSAYKRPGNNIYITRRIGEAVELEPHLRKPVESQSP IVNPQFRPMTNQMLHQQHQQMQQQQQQQQLQQRQQPGFLQQLFGIGGSGG GGGSGTQQQQHVRPVPLQQQQVQQIAQQHPQQQHLVGGQPTTFRAVSEND LYLLGAIEKLVYRVDYLESRVRRSEQLIYYLMAGNNQKEVKDPCPANFTR ISDNCYYINSQQQVNWKTANSACKGLNSHLAEFEKVSENEEIMAYLLNQP THRGRDYWLGGLNPGLLWIWSNSAKPVNPNMNLTSIAMAQKGENSTAANL VDSSEQAAEEATGEDVLNNTVQIEGKGRCLRLSYNAGKHSYVYYGQECTS RHYYICEHEDKTLDNKIKKITRELKLFE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11486-PA | 464 | GF11486-PA | 82..464 | 1..378 | 1561 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16910-PA | 474 | GG16910-PA | 80..474 | 1..378 | 1951 | 93.9 | Plus |
Dere\GG16911-PA | 136 | GG16911-PA | 1..136 | 243..378 | 733 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18859-PA | 409 | GH18859-PA | 39..409 | 4..378 | 1520 | 81 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14866-PB | 455 | CG14866-PB | 78..455 | 1..378 | 2006 | 100 | Plus |
CG14866-PA | 378 | CG14866-PA | 1..378 | 1..378 | 2006 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22930-PA | 393 | GI22930-PA | 39..393 | 1..378 | 1453 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12545-PA | 472 | GL12545-PA | 100..472 | 8..378 | 1500 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13305-PB | 378 | GA13305-PB | 1..378 | 1..378 | 1530 | 84.7 | Plus |
Dpse\GA13305-PA | 427 | GA13305-PA | 57..427 | 8..378 | 1514 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24217-PA | 461 | GM24217-PA | 78..461 | 1..378 | 1950 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19007-PA | 462 | GD19007-PA | 78..462 | 1..378 | 1628 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23213-PA | 415 | GJ23213-PA | 42..415 | 1..378 | 1447 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13798-PA | 426 | GK13798-PA | 49..426 | 1..378 | 1477 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24293-PA | 472 | GE24293-PA | 86..472 | 1..378 | 1607 | 94.3 | Plus |
Translation from 473 to 1609
> RE26319.hyp MGADMGINGPLSYHSSAYKRPGNNIYITRRIGEAVELEPHLRKPVESQSP IVNPQFRPMTNQMLHQQHQQMQQQQQQQQLQQRQQPGFLQQLFGIGGSGG GGGSGTQQQQHVRPVPLQQQQVQQIAQQHPQQQHLVGGQPTTFRAVSEND LYLLGAIEKLVYRVDYLESRVRRSEQLIYYLMAGNNQKEVKDPCPANFTR ISDNCYYINSQQQVNWKTANSACKGLNSHLAEFEKVSENEEIMAYLLNQP THRGRDYWLGGLNPGLLWIWSNSAKPVNPNMNLTSIAMAQKGENSTAANL VDSSEQAAEEATGEDVLNNTVQIEGKGRCLRLSYNAGKHSYVYYGQECTS RHYYICEHEDKTLDNKIKKITRELKLFE*