BDGP Sequence Production Resources |
Search the DGRC for RE26382
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 263 |
Well: | 82 |
Vector: | pFlc-1 |
Associated Gene/Transcript | RpL18A-RA |
Protein status: | RE26382.pep: gold |
Preliminary Size: | 660 |
Sequenced Size: | 686 |
Gene | Date | Evidence |
---|---|---|
CG6510 | 2001-12-17 | Blastp of sequenced clone |
CG6510 | 2002-01-01 | Sim4 clustering to Release 2 |
RpL18A | 2008-04-29 | Release 5.5 accounting |
RpL18A | 2008-08-15 | Release 5.9 accounting |
RpL18A | 2008-12-18 | 5.12 accounting |
686 bp (686 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071222
> RE26382.complete GAATCGAGGTTCAGTGTCATACCGATTTGACAAGCTCTTTCCGTTTCCTT TTCGCGTGAACGTCCAACATGAGAGCCAAGGGATTGTTGAAGGAGTACGA GGTCGTGGGCCGCAAGCTGCCCAGCGAGAAGGAGCCCCAGACTCCCCTCT ACAAGATGCGCATCTTTGCCCCCGACAACATCGTGGCCAAATCCCGCTTC TGGTACTTCCTGCGCCAACTGAAGAAGTTCAAGAAGACCACCGGCGAGAT CGTGTCCATCAAGCAGGTGTACGAGACGTCGCCCGTGAAGATCAAGAACT TCGGCATCTGGCTGCGTTACGATTCCCGCTCGGGCACCCACAACATGTAC CGCGAGTACCGTGACCTGACTGTCGGCGGTGCCGTCACTCAGTGCTACCG CGACATGGGAGCCCGCCACCGTGCCCGTGCCCACTCCATCCAGATCATTA AGGTGGACTCGATCCCTGCCGCCAAGACCCGCCGCGTGCACGTGAAGCAG TTCCACGATTCAAAGATCAAGTTCCCTCTGGTCCAGCGTGTCCACCACAA GGGCAACAGGAAACTGTTCTCGTTCAGGAAGCCCAGGACCTACTTCCAGT AGGATTCTCCTGCATCCTATACCTATGACTTAGTGGATTTTTTCAATAAA TGAGAACGTTGAAGAGTAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13433458..13434038 | 87..667 | 99 | <- | Minus |
chr2R | 13434473..13434558 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL18A-RA | 1..534 | 69..602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL18A-RA | 1..534 | 69..602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL18A-RA | 1..534 | 69..602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL18A-RA | 1..534 | 69..602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL18A-RA | 1..534 | 69..602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL18A-RA | 1..667 | 1..667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL18A-RA | 1..667 | 1..667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL18A-RA | 1..635 | 33..667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL18A-RA | 1..667 | 1..667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL18A-RA | 1..635 | 33..667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17546406..17546986 | 87..667 | 100 | <- | Minus |
2R | 17547409..17547494 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17546406..17546986 | 87..667 | 100 | <- | Minus |
2R | 17547409..17547494 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17546406..17546986 | 87..667 | 100 | <- | Minus |
2R | 17547409..17547494 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13433911..13434491 | 87..667 | 100 | <- | Minus |
arm_2R | 13434914..13434999 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17547605..17548185 | 87..667 | 100 | <- | Minus |
2R | 17548608..17548693 | 1..86 | 100 | Minus |
Translation from 68 to 601
> RE26382.hyp MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQ LKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDL TVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKI KFPLVQRVHHKGNRKLFSFRKPRTYFQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL18A-PA | 177 | CG6510-PA | 1..177 | 1..177 | 932 | 100 | Plus |
Translation from 68 to 601
> RE26382.pep MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQ LKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDL TVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKI KFPLVQRVHHKGNRKLFSFRKPRTYFQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13512-PA | 177 | GF13512-PA | 1..177 | 1..177 | 931 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21044-PA | 177 | GG21044-PA | 1..177 | 1..177 | 942 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20961-PA | 177 | GH20961-PA | 1..177 | 1..177 | 920 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL18A-PA | 177 | CG6510-PA | 1..177 | 1..177 | 932 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21298-PA | 177 | GI21298-PA | 1..177 | 1..177 | 928 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10622-PA | 177 | GL10622-PA | 1..177 | 1..177 | 930 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19650-PA | 177 | GA19650-PA | 1..177 | 1..177 | 930 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19972-PA | 177 | GM19972-PA | 1..177 | 1..177 | 942 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25466-PA | 177 | GD25466-PA | 1..177 | 1..177 | 942 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20900-PA | 177 | GJ20900-PA | 1..177 | 1..177 | 928 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21403-PA | 177 | GK21403-PA | 1..177 | 1..177 | 932 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\RpL18A-PA | 177 | GE13987-PA | 1..177 | 1..177 | 942 | 100 | Plus |