BDGP Sequence Production Resources |
Search the DGRC for RE26973
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 269 |
Well: | 73 |
Vector: | pFlc-1 |
Associated Gene/Transcript | MFS16-RB |
Protein status: | RE26973.pep: gold |
Preliminary Size: | 2553 |
Sequenced Size: | 2336 |
Gene | Date | Evidence |
---|---|---|
CG10069 | 2002-10-17 | Blastp of sequenced clone |
CG10069 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10069 | 2008-04-29 | Release 5.5 accounting |
CG10069 | 2008-08-15 | Release 5.9 accounting |
CG10069 | 2008-12-18 | 5.12 accounting |
2336 bp (2336 high quality bases) assembled on 2002-10-17
GenBank Submission: BT001590
> RE26973.complete AGTGTGTGTTTAACGGTAATATTAAGTGGCTAAAGCTGTTTTTCAATGTC GCCGTGTTTATTCCCAAGCAATCTGTTAGATTCCGCAAGAAATTCCATCT GGTGGCGACAACAAACAAAGACTTAGAAATCCGACAAGCGTCGACTATGA AATACTCTGTAAATTGATGAGGACAAGTGAACAGAAAAGTAGCTGGCATT ACTCGCAACCGAAACGGATTCGGGAACCCAGCCACCTGGACGAGCAGCAC TTGCACCTCGCCCACTGTCCGCGCCGGTCGATGAGAGCTTCACTGGGATT GGGCAGAACGCGAAAGATGAGCAATAACTACAACGACGTGCCATTCGGCA TCCGGGCTGTGCAGCGGCTGTCCCGACAATGCTGCACCCGCTTCCATGCC CGCAGAGATTTGCTCTACAAGATGTCAGTGTTTGTGCTAACTTTCCTGGC CTACGCCTGCTATCACATGTGCCGCAAGCCCATCTCCGTAGTCAAGTCGG TGCTGCAAGGAAACTGTTCCACAGCGCTGGCTGCATCGGGTCAGGATTGT GGATATGCGCCCTTTGATGTTCCCGATGCCACCACACTCTTTGGAATGCT GGACTCGGCCTTCCTCTTCTCCTATGCCATCGCTATGTTCGCTTCTGGTT TCGTGGCGGAACGCGTTTCCCTGCGATACTTCTTGTCCATGGGCATGATC CTCACCGGAGTGTTCACTTACATGTTCGGCATTGCTCGCACCTCCAATAT CCATAGTTTGTGGTATTTCATAATAGTGCAAATATTCGCTGGCATCTTCC AGACGACCGGATGGCCAGGTGTAGTGGCCCTCGTGGGTCGTTGGTTTGGA AAGTCGAAACGCGGGCTCATTTTTGGTATATGGAACAGTCATACGTCTAT TGGAAACATTCTTGGCACGCTGATAGCGGCGCATTATGTGGAATCCGATT GGGCGCTGTCGTTTGTGGTACCCGGCATTATCATTGCAGCCGTTGGATTT TTACTCTTCCTTTTCCTAGTGGATCAGCCGGAGATTGTGGGCTGTTATCC ACAAGCCGGACAGCATGAGCGTCGCGTGGCCAACGAGTCTGATGTGGAAC AGGACGACGAGGAGCAGGTGCGCCATAACGATGCGGAAATCAACTATAGA TCTGCTCCCACCGAACGTACTCCAATCCTTCCACGATCTCAACCAGAGGC GGTGCCAAGGGGTCGCGGACGTCCCATCAGTCTGATCGATGCTTTATTCA TACCCGGTGTGGTAGAGTTTTCGCTGTGTTTGTTCTTTACCAAGCTGGTG AGCTACACCTTCATGTACTGGCTGCCACTTTACATACAAAAATCCAGCAC ATTGGGTCCAGAACTGTCCGCTGATTTGTCCACTCTTTTCGATGTGGGTG GTATTTTGGGTGCAATAGCTGCGGGCTATCTATCAGATGTGAGCGGAATG TCGGCCACCGTCTGCACAGGCATGTTGTTCGTTGCCTCGCCCATTCTGCT GATGTATCAACAATATGGTGCATTGTCGATGACAATCAGCATAGTGCTCT TGATTGTGGTCGGCATCTTTGTGAACGGACCATATGCCCTGATTACAACC TCTGTAAGTGCAGAGCTGGGCCAGCACAGCTCCTTGGAGGGAAATGCCAA TGCTCTGGCCACGGTGACGGCCATTATCGATGGTACTGGGTCAATCGGAG CGGCAGTTGGTCCACTGCTTGCCGGCCTTATCTCCACCGCCGGATGGCAG TATGTCTTCCACATGCTCATCGCTGCCGACATCATTGCCATGGTGCTGCT GGGGCGACTGGTCTTCAAGGAGTTCGCTGCACTGCGTCGTGCATCGCATC GTATTCGGATTGAATAGCAGGAAGAAGCTGAAGCGGATGTGGTTTGACCA TATATATATTTTTGTTTCTAGCGTTCTCTGTACATACCATAGCATTTGTA TAGCTAACATAAAGAACGTTTTCTTTTCATTCGAGAGCATATCAGAGTGT TTCTGATCCTAGTTTTACCCATACATGTCAATACCTAATGTTATTTTAAA TGGAATGTTTACCATCATCTTAGGCTATCCATCAAGTTTACAATTTTGAT ATATTACCTACATACATATATATATATATATATATATACATACATCTATG TTGTAATCTTGTGTGTGCGCGCGTGTGTCAGAGTCTCCTCGTTTTAAGTG CCGAACTATCATTAGTACTAGCGTAATTCTACTGCTATGTAAATACACTT TATCGTACACTTTTCGTACCAATAAAACCGAATTTGACTGTTCTCCGCGG CAGTACAATTTCTCAATGGCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10069-RB | 2454 | CG10069-RB | 92..2411 | 1..2320 | 11600 | 100 | Plus |
CG10069.b | 2331 | CG10069.b | 92..2331 | 79..2318 | 11200 | 100 | Plus |
CG10069-RC | 2708 | CG10069-RC | 534..2665 | 189..2320 | 10660 | 100 | Plus |
CG10069-RC | 2708 | CG10069-RC | 80..270 | 1..191 | 955 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17171350..17172174 | 1496..2320 | 4050 | 99.4 | Plus |
chr2R | 21145070 | chr2R | 17170037..17170607 | 566..1136 | 2765 | 98.9 | Plus |
chr2R | 21145070 | chr2R | 17169482..17169707 | 189..414 | 1115 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 17170876..17171088 | 1135..1347 | 1065 | 100 | Plus |
chr2R | 21145070 | chr2R | 17168872..17169062 | 1..191 | 925 | 99 | Plus |
chr2R | 21145070 | chr2R | 17169826..17169977 | 415..566 | 745 | 99.3 | Plus |
chr2R | 21145070 | chr2R | 17171145..17171293 | 1347..1495 | 745 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21284855..21285679 | 1496..2320 | 4125 | 100 | Plus |
2R | 25286936 | 2R | 21283542..21284112 | 566..1136 | 2855 | 100 | Plus |
2R | 25286936 | 2R | 21282987..21283212 | 189..414 | 1130 | 100 | Plus |
2R | 25286936 | 2R | 21284381..21284593 | 1135..1347 | 1065 | 100 | Plus |
2R | 25286936 | 2R | 21282377..21282567 | 1..191 | 955 | 100 | Plus |
2R | 25286936 | 2R | 21283331..21283482 | 415..566 | 760 | 100 | Plus |
2R | 25286936 | 2R | 21284650..21284798 | 1347..1495 | 745 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21286054..21286878 | 1496..2320 | 4125 | 100 | Plus |
2R | 25260384 | 2R | 21284741..21285311 | 566..1136 | 2855 | 100 | Plus |
2R | 25260384 | 2R | 21284186..21284411 | 189..414 | 1130 | 100 | Plus |
2R | 25260384 | 2R | 21285580..21285792 | 1135..1347 | 1065 | 100 | Plus |
2R | 25260384 | 2R | 21283576..21283766 | 1..191 | 955 | 100 | Plus |
2R | 25260384 | 2R | 21284530..21284681 | 415..566 | 760 | 100 | Plus |
2R | 25260384 | 2R | 21285849..21285997 | 1347..1495 | 745 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 815..872 | 2144..2088 | 134 | 72.4 | Minus |
Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 5105..5256 | 2162..2012 | 127 | 58.3 | Minus |
Tabor | 7345 | Tabor TABOR 7345bp | 2261..2355 | 2048..2141 | 121 | 61.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17168872..17169059 | 1..188 | 98 | -> | Plus |
chr2R | 17169482..17169707 | 189..414 | 99 | -> | Plus |
chr2R | 17169826..17169977 | 415..566 | 99 | -> | Plus |
chr2R | 17170038..17170606 | 567..1135 | 98 | -> | Plus |
chr2R | 17170877..17171087 | 1136..1346 | 100 | -> | Plus |
chr2R | 17171145..17171293 | 1347..1495 | 100 | -> | Plus |
chr2R | 17171350..17172174 | 1496..2320 | 94 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10069-RB | 1..1701 | 167..1867 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10069-RB | 1..1701 | 167..1867 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MFS16-RB | 1..1701 | 167..1867 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10069-RB | 1..1701 | 167..1867 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MFS16-RB | 1..1701 | 167..1867 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10069-RB | 1..2310 | 1..2310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10069-RB | 1..2310 | 1..2310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MFS16-RB | 80..2399 | 1..2320 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10069-RB | 1..2310 | 1..2310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MFS16-RB | 80..2399 | 1..2320 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21282377..21282564 | 1..188 | 100 | -> | Plus |
2R | 21283331..21283482 | 415..566 | 100 | -> | Plus |
2R | 21282987..21283212 | 189..414 | 100 | -> | Plus |
2R | 21283543..21284111 | 567..1135 | 100 | -> | Plus |
2R | 21284382..21284592 | 1136..1346 | 100 | -> | Plus |
2R | 21284650..21284798 | 1347..1495 | 100 | -> | Plus |
2R | 21284855..21285679 | 1496..2320 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21282377..21282564 | 1..188 | 100 | -> | Plus |
2R | 21283331..21283482 | 415..566 | 100 | -> | Plus |
2R | 21282987..21283212 | 189..414 | 100 | -> | Plus |
2R | 21283543..21284111 | 567..1135 | 100 | -> | Plus |
2R | 21284382..21284592 | 1136..1346 | 100 | -> | Plus |
2R | 21284650..21284798 | 1347..1495 | 100 | -> | Plus |
2R | 21284855..21285679 | 1496..2320 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21282377..21282564 | 1..188 | 100 | -> | Plus |
2R | 21283331..21283482 | 415..566 | 100 | -> | Plus |
2R | 21282987..21283212 | 189..414 | 100 | -> | Plus |
2R | 21283543..21284111 | 567..1135 | 100 | -> | Plus |
2R | 21284382..21284592 | 1136..1346 | 100 | -> | Plus |
2R | 21284650..21284798 | 1347..1495 | 100 | -> | Plus |
2R | 21284855..21285679 | 1496..2320 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17169882..17170069 | 1..188 | 100 | -> | Plus |
arm_2R | 17170492..17170717 | 189..414 | 100 | -> | Plus |
arm_2R | 17170836..17170987 | 415..566 | 100 | -> | Plus |
arm_2R | 17171048..17171616 | 567..1135 | 100 | -> | Plus |
arm_2R | 17171887..17172097 | 1136..1346 | 100 | -> | Plus |
arm_2R | 17172155..17172303 | 1347..1495 | 100 | -> | Plus |
arm_2R | 17172360..17173184 | 1496..2320 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21284186..21284411 | 189..414 | 100 | -> | Plus |
2R | 21284530..21284681 | 415..566 | 100 | -> | Plus |
2R | 21284742..21285310 | 567..1135 | 100 | -> | Plus |
2R | 21285581..21285791 | 1136..1346 | 100 | -> | Plus |
2R | 21285849..21285997 | 1347..1495 | 100 | -> | Plus |
2R | 21286054..21286878 | 1496..2320 | 100 | Plus | |
2R | 21283576..21283763 | 1..188 | 100 | -> | Plus |
Translation from 166 to 1866
> RE26973.pep MRTSEQKSSWHYSQPKRIREPSHLDEQHLHLAHCPRRSMRASLGLGRTRK MSNNYNDVPFGIRAVQRLSRQCCTRFHARRDLLYKMSVFVLTFLAYACYH MCRKPISVVKSVLQGNCSTALAASGQDCGYAPFDVPDATTLFGMLDSAFL FSYAIAMFASGFVAERVSLRYFLSMGMILTGVFTYMFGIARTSNIHSLWY FIIVQIFAGIFQTTGWPGVVALVGRWFGKSKRGLIFGIWNSHTSIGNILG TLIAAHYVESDWALSFVVPGIIIAAVGFLLFLFLVDQPEIVGCYPQAGQH ERRVANESDVEQDDEEQVRHNDAEINYRSAPTERTPILPRSQPEAVPRGR GRPISLIDALFIPGVVEFSLCLFFTKLVSYTFMYWLPLYIQKSSTLGPEL SADLSTLFDVGGILGAIAAGYLSDVSGMSATVCTGMLFVASPILLMYQQY GALSMTISIVLLIVVGIFVNGPYALITTSVSAELGQHSSLEGNANALATV TAIIDGTGSIGAAVGPLLAGLISTAGWQYVFHMLIAADIIAMVLLGRLVF KEFAALRRASHRIRIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12808-PA | 528 | GF12808-PA | 1..528 | 51..566 | 2358 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22106-PA | 528 | GG22106-PA | 1..528 | 39..566 | 2731 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21864-PA | 530 | GH21864-PA | 7..530 | 47..566 | 2234 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MFS16-PB | 566 | CG10069-PB | 1..566 | 1..566 | 2915 | 100 | Plus |
MFS16-PD | 528 | CG10069-PD | 1..528 | 39..566 | 2702 | 100 | Plus |
MFS16-PC | 528 | CG10069-PC | 1..528 | 39..566 | 2702 | 100 | Plus |
MFS16-PA | 528 | CG10069-PA | 1..528 | 39..566 | 2702 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20365-PA | 522 | GI20365-PA | 1..522 | 51..566 | 2130 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11333-PA | 399 | GL11333-PA | 1..398 | 51..443 | 1856 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24689-PA | 484 | GA24689-PA | 1..484 | 51..566 | 2121 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15825-PA | 566 | GM15825-PA | 1..566 | 1..566 | 2955 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11582-PA | 551 | GD11582-PA | 1..551 | 1..566 | 2855 | 95.9 | Plus |
Dsim\GD15444-PA | 139 | GD15444-PA | 1..139 | 428..566 | 696 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22092-PA | 522 | GJ22092-PA | 1..522 | 51..566 | 2178 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21661-PA | 514 | GK21661-PA | 1..514 | 51..566 | 2220 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12187-PA | 515 | GE12187-PA | 1..515 | 51..566 | 2672 | 98.3 | Plus |
Translation from 166 to 1866
> RE26973.hyp MRTSEQKSSWHYSQPKRIREPSHLDEQHLHLAHCPRRSMRASLGLGRTRK MSNNYNDVPFGIRAVQRLSRQCCTRFHARRDLLYKMSVFVLTFLAYACYH MCRKPISVVKSVLQGNCSTALAASGQDCGYAPFDVPDATTLFGMLDSAFL FSYAIAMFASGFVAERVSLRYFLSMGMILTGVFTYMFGIARTSNIHSLWY FIIVQIFAGIFQTTGWPGVVALVGRWFGKSKRGLIFGIWNSHTSIGNILG TLIAAHYVESDWALSFVVPGIIIAAVGFLLFLFLVDQPEIVGCYPQAGQH ERRVANESDVEQDDEEQVRHNDAEINYRSAPTERTPILPRSQPEAVPRGR GRPISLIDALFIPGVVEFSLCLFFTKLVSYTFMYWLPLYIQKSSTLGPEL SADLSTLFDVGGILGAIAAGYLSDVSGMSATVCTGMLFVASPILLMYQQY GALSMTISIVLLIVVGIFVNGPYALITTSVSAELGQHSSLEGNANALATV TAIIDGTGSIGAAVGPLLAGLISTAGWQYVFHMLIAADIIAMVLLGRLVF KEFAALRRASHRIRIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MFS16-PB | 566 | CG10069-PB | 1..566 | 1..566 | 2915 | 100 | Plus |
MFS16-PD | 528 | CG10069-PD | 1..528 | 39..566 | 2702 | 100 | Plus |
MFS16-PC | 528 | CG10069-PC | 1..528 | 39..566 | 2702 | 100 | Plus |
MFS16-PA | 528 | CG10069-PA | 1..528 | 39..566 | 2702 | 100 | Plus |