BDGP Sequence Production Resources |
Search the DGRC for RE27042
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 270 |
Well: | 42 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Ilp4-RA |
Protein status: | RE27042.pep: gold |
Preliminary Size: | 405 |
Sequenced Size: | 835 |
Gene | Date | Evidence |
---|---|---|
CG6736 | 2001-12-14 | Blastp of sequenced clone |
CG6736 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6736 | 2003-01-01 | Sim4 clustering to Release 3 |
Ilp4 | 2008-04-29 | Release 5.5 accounting |
Ilp4 | 2008-08-15 | Release 5.9 accounting |
Ilp4 | 2008-12-18 | 5.12 accounting |
835 bp (835 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071235
> RE27042.complete TGTGCGCCGGCCAACTCCAAGGATCAGTATCATTTGGCATGCCCAGCGAT CGGTTTGCCAAGAGCACGAGAAGTTCGAGATAGGACCCAGAGATACCAGA GATAAAGGAGGCATACCTTTTATGCCCGGTGAGAGCACGGACGGCGGAGT GAAAGATCGAGCAGGATGAGCCTGATTAGACTGGGACTGGCGCTGCTGCT CCTGCTGGCCACCGTGTCGCAGTTACTGCAGCCGGTCCAGGGACGCCGAA AGATGTGCGGCGAGGCTCTGATCCAGGCACTGGATGTGATTTGTGTTAAT GGATTTACACGCCGTGTCAGGCGGAGCAGTGCGTCTAAGGATGCTAGAGT GCGAGACCTTATCCGTAAGCTACAGCAGCCGGATGAGGACATTGAACAGG AAACGGAAACGGGAAGGTTAAAGCAGAAGCATACGGATGCGGATACGGAG AAGGGTGTGCCACCGGCCGTCGGAAGTGGACGAAAGTTGCGACGCCATCG GCGACGCATCGCCCACGAGTGTTGCAAGGAGGGCTGCACCTACGACGATA TACTGGACTACTGCGCCTGATGACCAGGATGGCAAAACAAAACAAATAAA AACCAGAAACCAGATCCCAAAAACCAAGTACCAGATGAACACGACATGGC TGAGATTTTGTGTGGCGGCACGGGGAAAACACCCGACGACCGGCAGGCTA TTTGCAATTCATTTTCCTACTACACTTAACCCCTAACTATAAACGTAATC GTATTTCCAAATATTTCATTGTAAAATTTCTAGTGGAGGCAAATAAAGTT ACTCTCCAAGCAGCAGCAGAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9795159..9795646 | 332..819 | 100 | <- | Minus |
chr3L | 9795708..9796038 | 1..331 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ilp4-RA | 1..405 | 166..570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ilp4-RA | 1..405 | 166..570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ilp4-RA | 1..405 | 166..570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ilp4-RA | 1..405 | 166..570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ilp4-RA | 1..405 | 166..570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ilp4-RA | 1..819 | 1..819 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ilp4-RA | 1..819 | 1..819 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ilp4-RA | 1..804 | 16..819 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ilp4-RA | 1..819 | 1..819 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ilp4-RA | 1..804 | 16..819 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9803399..9803886 | 332..819 | 100 | <- | Minus |
3L | 9803948..9804278 | 1..331 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9803399..9803886 | 332..819 | 100 | <- | Minus |
3L | 9803948..9804278 | 1..331 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9803399..9803886 | 332..819 | 100 | <- | Minus |
3L | 9803948..9804278 | 1..331 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9796499..9796986 | 332..819 | 100 | <- | Minus |
arm_3L | 9797048..9797378 | 1..331 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9796499..9796986 | 332..819 | 100 | <- | Minus |
3L | 9797048..9797378 | 1..331 | 99 | Minus |
Translation from 165 to 569
> RE27042.pep MSLIRLGLALLLLLATVSQLLQPVQGRRKMCGEALIQALDVICVNGFTRR VRRSSASKDARVRDLIRKLQQPDEDIEQETETGRLKQKHTDADTEKGVPP AVGSGRKLRRHRRRIAHECCKEGCTYDDILDYCA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25125-PA | 123 | GF25125-PA | 1..123 | 1..134 | 380 | 59 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14005-PA | 140 | GG14005-PA | 15..140 | 15..134 | 477 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16016-PA | 119 | GH16016-PA | 12..119 | 14..134 | 217 | 44.6 | Plus |
Dgri\GH15431-PA | 156 | GH15431-PA | 47..154 | 25..133 | 133 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ilp4-PA | 134 | CG6736-PA | 1..134 | 1..134 | 688 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12280-PA | 112 | GI12280-PA | 18..112 | 22..134 | 163 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16361-PA | 149 | GL16361-PA | 18..149 | 13..134 | 216 | 38.2 | Plus |
Dper\GL16325-PA | 115 | GL16325-PA | 20..115 | 15..134 | 214 | 44.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19821-PA | 115 | GA19821-PA | 20..115 | 15..134 | 214 | 44.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24839-PA | 134 | GM24839-PA | 1..134 | 1..134 | 674 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12891-PA | 134 | GD12891-PA | 1..134 | 1..134 | 674 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13217-PA | 126 | GJ13217-PA | 3..126 | 4..134 | 252 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11757-PA | 139 | GK11757-PA | 25..139 | 22..134 | 237 | 44 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Ilp4-PA | 137 | GE20300-PA | 16..137 | 15..134 | 409 | 81.1 | Plus |
Translation from 165 to 569
> RE27042.hyp MSLIRLGLALLLLLATVSQLLQPVQGRRKMCGEALIQALDVICVNGFTRR VRRSSASKDARVRDLIRKLQQPDEDIEQETETGRLKQKHTDADTEKGVPP AVGSGRKLRRHRRRIAHECCKEGCTYDDILDYCA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ilp4-PA | 134 | CG6736-PA | 1..134 | 1..134 | 688 | 100 | Plus |