BDGP Sequence Production Resources |
Search the DGRC for RE27077
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 270 |
Well: | 77 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG9505-RA |
Protein status: | RE27077.pep: gold |
Sequenced Size: | 2324 |
Gene | Date | Evidence |
---|---|---|
CG9505 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9505 | 2008-04-29 | Release 5.5 accounting |
CG9505 | 2008-08-15 | Release 5.9 accounting |
CG9505 | 2008-12-18 | 5.12 accounting |
2324 bp (2324 high quality bases) assembled on 2004-12-16
GenBank Submission: BT021291
> RE27077.complete AGTTGAATTTGAGCAAGCGGCAAACGCGCAACACCCGTCCTGAAGCATCG ATAAATCGGATTCGGAATCGGAATCGCCAAACTCGTCGGGTTAAAATACA ATCAGCAGCTTTACTTTGAAATGATCGTATCTAAGCACCTGAGAAAAGAA CTTTTTAAAGTGCCGCAGTACAGGTGCAGCTTATGAATCTCGCCGAAGTG AAATAAACGTGCGGAAAGATCAGCTATTCCTTTGCCCGATAGTAAATCCA AGAAGCAATGGTGCAAAATCTGTGGACTGCCCTCCTTCTGCTGGGCAGTG CCACCTGCGGTTCGAGTGTGCCGGTCAAGGCAAATGATCCGGAACAGAGT TGTCCGTACCTCGGAGAGTGCAATTCCACGATCAATCAGCAGCACATCGA TACGCTGATGTCCTACGTGGACAGCGAAAAAAATCCCTGCGAGGATTTCT ATGCCTACGCCTGCGGAAAATGGCGGGCGAAGCATGGAAGCCACACAACC GCCACGATGATCAGCGAATCGCAAATTAACCGCCAGTACGAGGATTTGTT CCTACAACTGCTGAGGAATCCCAGCGCCCCGGAATATGGATACCCCATGT TCGCCAAGGTGTTGGCCCATTACCAGTCATGCATCGCGCTGGAGAAGCCG GATCTGAGGCGATACATCGAGCTACTGGACCGGGATCTGCTCGCCTCCTT AAACTCCACACACTGGATGCACCTGCTGGCAGCTCTGGGGCGCTACGGCT ACCACGGTCACTACGTCCAAGTAGAGGTACGTTGGTACAACGCCACCCAT CACATGATCTTCCTGCTGCCGCACAATCGCCACCTAAACCTGAGTCTCAC GCAAGACATCTATGATGCGCTGAGTCAGGATGGCTCCTCCTGGCCACCGC TCCACCAGCTACAGGAGCAGTTCAGAAGTTTGGAGCAGAACTTGGTGCGA CTGGCTAAGCCCCATTCGGCGGACGATACCTTCCGGAATTACAGTCTGGA TCAGATTCGGACGGAGGTGCCGGGTCTGCATTGGGACGAGGCGCTGAGGA CACAGCTGGGCAGATCGGTGCCGGGGAATCATGTCTTCCAGGTGGACGAC TTGGACGCGATCGAGGGGCTTGTGGAGTACCTCAATACGGTAGATACTCT GCTGCTCAATCGGTACAGCCTGGCAAGATTTCTCAGCCACCTGCTTGAGC TGCCACATAACCCGCTGGCCACTTGGGAGTCCGGACAGCGGTCGCGGGGA AGGAACTGTATTCGTCACATGCGCCGCTCTGTTTACCTGCCGATGAACTA CGTCTACGAGAGAAGTTTCTACTCCCGGCGCCGCCACGCGGATGAGCTGG TCATCCACAGCGTCTTCCAGCAGCTGCAGAGTCAGCTGGAGCTGCGGGTC CAGCACAACGCCTTCAATCTAAGTCAGGATCTGGTGAAATCGCTGCAGGC AAAGGTGCACCAGATGCGCATCAATGTGGGCAACCTACCGCCCAATGTGA CGGAGCAATTCTATTGGGACAGCGACCGGCGGTGGAGCGTGGGCAGGGAC TTCTACGAGAATCACCTGAACAGCCTGCTCTACTACTACACGCTCGTCGC CGATTTGGAAAGCAGCTCGGACCAGGAGGAGCGGGACATCTGGTACAGCT TCAATATGCATACGCCCGAGTTTCCCGACAACATCGATGCCACGCCGTAC TTCTACTGCCTGGGCAACATCATCTTCGTGCCGTACTCCTACGTAAAGCG TCCCTTCTTCGATGCCAACTTCTGGCCAGCGCTGCTCTACGGTGATCTGG CCAACACCCTGGGCCACGAGATCATGCACGCCTTCGACACCGATCTGGTG GACTACGATGCGCAGGGTAATCTGCGTAACTTTAGCGACCAGTTGGGCGA AGTGGAGCTCTACAACGGAGCGGTTGGATGCCTGAACAGCAGCGCTGTTA TGCTAAACGAGCGCACCTCCGACGTCAGCGGATCCCGGCTGGCCATGCAA ACCTACGGTGGCGACTGGCTCACTCGGTCGGGCAACGGGCGTCTGTACTT CCTCCAGTTCGCCCACTTCTTCTGCGGCGACGAGGGCGACCAGTACCATG ACTCCGGCAGCCAGCGGCTGAACTACGCCCTCGGCCAGGTGCCGCAGTTC GCAGAGGTGTTCCGGTGCCATGTTGGCTCCGGAATGACCAGCGCGGACCA GTGTCCCTTCTGGTGAGGGATGCCCAGAGACGGTCGGTGACTCCCACTGC TAGTCGGTGTATAGCTTTAATTAGGAACCCAAGTATTGTGAATAAACTTC TATGCTTAACAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9505-RA | 2312 | CG9505-RA | 1..2312 | 1..2312 | 11545 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6366879..6369186 | 1..2308 | 11525 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6367884..6370195 | 1..2312 | 11545 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6367884..6370195 | 1..2312 | 11545 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6366879..6369188 | 1..2310 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9505-RA | 1..1959 | 258..2216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9505-RA | 1..1959 | 258..2216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9505-RA | 1..1959 | 258..2216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9505-RA | 1..1959 | 258..2216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9505-RA | 1..1959 | 258..2216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9505-RA | 1..2310 | 1..2310 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9505-RA | 1..2310 | 1..2310 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9505-RA | 3..2309 | 1..2307 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9505-RA | 1..2310 | 1..2310 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9505-RA | 3..2309 | 1..2307 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6367884..6370193 | 1..2310 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6367884..6370193 | 1..2310 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6367884..6370193 | 1..2310 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6367884..6370193 | 1..2310 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6367884..6370193 | 1..2310 | 99 | Plus |
Translation from 257 to 2215
> RE27077.pep MVQNLWTALLLLGSATCGSSVPVKANDPEQSCPYLGECNSTINQQHIDTL MSYVDSEKNPCEDFYAYACGKWRAKHGSHTTATMISESQINRQYEDLFLQ LLRNPSAPEYGYPMFAKVLAHYQSCIALEKPDLRRYIELLDRDLLASLNS THWMHLLAALGRYGYHGHYVQVEVRWYNATHHMIFLLPHNRHLNLSLTQD IYDALSQDGSSWPPLHQLQEQFRSLEQNLVRLAKPHSADDTFRNYSLDQI RTEVPGLHWDEALRTQLGRSVPGNHVFQVDDLDAIEGLVEYLNTVDTLLL NRYSLARFLSHLLELPHNPLATWESGQRSRGRNCIRHMRRSVYLPMNYVY ERSFYSRRRHADELVIHSVFQQLQSQLELRVQHNAFNLSQDLVKSLQAKV HQMRINVGNLPPNVTEQFYWDSDRRWSVGRDFYENHLNSLLYYYTLVADL ESSSDQEERDIWYSFNMHTPEFPDNIDATPYFYCLGNIIFVPYSYVKRPF FDANFWPALLYGDLANTLGHEIMHAFDTDLVDYDAQGNLRNFSDQLGEVE LYNGAVGCLNSSAVMLNERTSDVSGSRLAMQTYGGDWLTRSGNGRLYFLQ FAHFFCGDEGDQYHDSGSQRLNYALGQVPQFAEVFRCHVGSGMTSADQCP FW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14517-PA | 598 | GF14517-PA | 6..598 | 54..652 | 1927 | 60.5 | Plus |
Dana\GF15392-PA | 656 | GF15392-PA | 1..656 | 5..652 | 452 | 24 | Plus |
Dana\GF16985-PA | 671 | GF16985-PA | 16..671 | 9..652 | 387 | 23.6 | Plus |
Dana\GF14519-PA | 682 | GF14519-PA | 31..682 | 41..652 | 371 | 23.9 | Plus |
Dana\GF20227-PA | 794 | GF20227-PA | 100..794 | 29..652 | 227 | 20.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10407-PA | 652 | GG10407-PA | 1..652 | 1..652 | 3237 | 91.3 | Plus |
Dere\GG10409-PA | 692 | GG10409-PA | 31..692 | 41..652 | 335 | 21.4 | Plus |
Dere\GG20308-PA | 632 | GG20308-PA | 195..618 | 215..652 | 294 | 24.1 | Plus |
Dere\GG17740-PA | 647 | GG17740-PA | 35..647 | 54..652 | 261 | 23.8 | Plus |
Dere\GG10248-PA | 669 | GG10248-PA | 1..669 | 1..652 | 257 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10990-PA | 647 | GH10990-PA | 1..647 | 2..652 | 1699 | 50.4 | Plus |
Dgri\GH13261-PA | 678 | GH13261-PA | 60..678 | 47..652 | 429 | 24.9 | Plus |
Dgri\GH13639-PA | 635 | GH13639-PA | 18..635 | 47..652 | 422 | 24.3 | Plus |
Dgri\GH25251-PA | 658 | GH25251-PA | 35..658 | 47..652 | 408 | 24.8 | Plus |
Dgri\GH17137-PA | 661 | GH17137-PA | 27..661 | 37..652 | 382 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nepl4-PA | 652 | CG9505-PA | 1..652 | 1..652 | 3526 | 100 | Plus |
Nepl6-PA | 655 | CG9508-PA | 26..655 | 43..652 | 410 | 25 | Plus |
Nepl5-PA | 684 | CG9507-PA | 31..684 | 41..652 | 371 | 22 | Plus |
Nepl8-PA | 619 | CG4580-PA | 17..608 | 43..638 | 324 | 23.9 | Plus |
Nep6-PB | 655 | CG3775-PB | 29..655 | 44..652 | 310 | 25.7 | Plus |
Nep6-PA | 655 | CG3775-PA | 29..655 | 44..652 | 310 | 25.7 | Plus |
Nepl10-PA | 633 | CG8550-PA | 24..619 | 42..652 | 284 | 22.5 | Plus |
Nepl7-PB | 669 | CG15485-PB | 1..669 | 1..652 | 252 | 22.6 | Plus |
Nepl7-PA | 669 | CG15485-PA | 1..669 | 1..652 | 252 | 22.6 | Plus |
frma-PG | 611 | CG3239-PG | 24..599 | 57..637 | 236 | 22.6 | Plus |
frma-PF | 611 | CG3239-PF | 24..599 | 57..637 | 236 | 22.6 | Plus |
Nep3-PC | 786 | CG9565-PC | 61..786 | 1..652 | 216 | 20.5 | Plus |
Nep3-PB | 786 | CG9565-PB | 61..786 | 1..652 | 216 | 20.5 | Plus |
Nep3-PA | 786 | CG9565-PA | 61..786 | 1..652 | 216 | 20.5 | Plus |
Nepl3-PA | 629 | CG31918-PA | 22..615 | 38..637 | 202 | 19.8 | Plus |
Nep4-PC | 978 | CG4058-PC | 475..978 | 185..652 | 196 | 20.7 | Plus |
Nep4-PB | 978 | CG4058-PB | 475..978 | 185..652 | 196 | 20.7 | Plus |
Nep4-PA | 1040 | CG4058-PA | 537..1040 | 185..652 | 196 | 20.7 | Plus |
Nep1-PD | 849 | CG5905-PD | 388..849 | 226..652 | 180 | 21.2 | Plus |
Nep1-PC | 849 | CG5905-PC | 388..849 | 226..652 | 180 | 21.2 | Plus |
Nep1-PA | 849 | CG5905-PA | 388..849 | 226..652 | 180 | 21.2 | Plus |
Nep1-PB | 849 | CG5905-PB | 388..849 | 226..652 | 180 | 21.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17505-PA | 662 | GI17505-PA | 22..662 | 2..652 | 1653 | 49.2 | Plus |
Dmoj\GI17503-PA | 863 | GI17503-PA | 230..863 | 43..652 | 514 | 26.3 | Plus |
Dmoj\GI10579-PA | 669 | GI10579-PA | 45..669 | 54..652 | 439 | 24.7 | Plus |
Dmoj\GI11574-PA | 689 | GI11574-PA | 38..689 | 48..652 | 350 | 22.9 | Plus |
Dmoj\GI19748-PA | 582 | GI19748-PA | 1..562 | 47..637 | 341 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26265-PA | 648 | GL26265-PA | 27..648 | 30..652 | 1962 | 60 | Plus |
Dper\GL26263-PA | 958 | GL26263-PA | 321..958 | 43..652 | 493 | 24.8 | Plus |
Dper\GL25525-PA | 676 | GL25525-PA | 31..676 | 41..652 | 392 | 23.5 | Plus |
Dper\GL10114-PA | 919 | GL10114-PA | 37..586 | 54..607 | 310 | 23.4 | Plus |
Dper\GL22967-PA | 676 | GL22967-PA | 40..676 | 50..652 | 240 | 22.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21840-PA | 648 | GA21840-PA | 27..648 | 30..652 | 1963 | 60 | Plus |
Dpse\GA28099-PA | 956 | GA28099-PA | 319..956 | 43..652 | 493 | 25.2 | Plus |
Dpse\GA21842-PA | 676 | GA21842-PA | 31..676 | 41..652 | 392 | 23.5 | Plus |
Dpse\GA21158-PA | 634 | GA21158-PA | 37..631 | 54..652 | 333 | 22.9 | Plus |
Dpse\GA17680-PA | 676 | GA17680-PA | 40..676 | 50..652 | 241 | 23.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18623-PA | 652 | GM18623-PA | 1..652 | 1..652 | 3407 | 96.8 | Plus |
Dsec\GM17944-PA | 948 | GM17944-PA | 304..948 | 28..652 | 389 | 23.8 | Plus |
Dsec\GM26493-PA | 661 | GM26493-PA | 11..661 | 7..652 | 332 | 23.8 | Plus |
Dsec\GM18625-PA | 684 | GM18625-PA | 31..684 | 41..652 | 328 | 21.6 | Plus |
Dsec\GM11585-PA | 655 | GM11585-PA | 38..655 | 54..652 | 307 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23405-PA | 640 | GD23405-PA | 1..640 | 1..652 | 3245 | 92.7 | Plus |
Dsim\GD22581-PA | 948 | GD22581-PA | 283..948 | 4..652 | 397 | 24.2 | Plus |
Dsim\GD24059-PA | 638 | GD24059-PA | 14..638 | 40..652 | 364 | 24.2 | Plus |
Dsim\GD23407-PA | 684 | GD23407-PA | 31..684 | 41..652 | 353 | 21.8 | Plus |
Dsim\GD21007-PA | 658 | GD21007-PA | 11..658 | 7..652 | 346 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15205-PA | 650 | GJ15205-PA | 4..650 | 5..652 | 1708 | 51.3 | Plus |
Dvir\GJ22936-PA | 666 | GJ22936-PA | 30..666 | 40..652 | 439 | 24.5 | Plus |
Dvir\GJ12871-PA | 699 | GJ12871-PA | 31..699 | 41..652 | 348 | 23 | Plus |
Dvir\GJ19503-PA | 650 | GJ19503-PA | 18..638 | 40..637 | 234 | 23.3 | Plus |
Dvir\GJ24402-PA | 670 | GJ24402-PA | 25..670 | 38..652 | 228 | 20.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15360-PA | 646 | GK15360-PA | 4..646 | 5..652 | 1724 | 51.1 | Plus |
Dwil\GK15358-PA | 952 | GK15358-PA | 322..952 | 43..652 | 512 | 26.5 | Plus |
Dwil\GK12098-PA | 679 | GK12098-PA | 32..679 | 42..652 | 438 | 25.5 | Plus |
Dwil\GK14758-PA | 685 | GK14758-PA | 31..685 | 41..652 | 368 | 23.1 | Plus |
Dwil\GK18887-PA | 635 | GK18887-PA | 20..608 | 42..637 | 362 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13824-PA | 653 | GE13824-PA | 1..653 | 1..652 | 3321 | 93.3 | Plus |
Dyak\GE18448-PA | 676 | GE18448-PA | 24..676 | 6..652 | 440 | 24.6 | Plus |
Dyak\GE13111-PA | 637 | GE13111-PA | 14..624 | 40..637 | 382 | 24.4 | Plus |
Dyak\GE10361-PA | 662 | GE10361-PA | 34..662 | 43..652 | 380 | 24 | Plus |
Dyak\GE13846-PA | 688 | GE13846-PA | 40..688 | 50..652 | 328 | 21.6 | Plus |
Translation from 257 to 2215
> RE27077.hyp MVQNLWTALLLLGSATCGSSVPVKANDPEQSCPYLGECNSTINQQHIDTL MSYVDSEKNPCEDFYAYACGKWRAKHGSHTTATMISESQINRQYEDLFLQ LLRNPSAPEYGYPMFAKVLAHYQSCIALEKPDLRRYIELLDRDLLASLNS THWMHLLAALGRYGYHGHYVQVEVRWYNATHHMIFLLPHNRHLNLSLTQD IYDALSQDGSSWPPLHQLQEQFRSLEQNLVRLAKPHSADDTFRNYSLDQI RTEVPGLHWDEALRTQLGRSVPGNHVFQVDDLDAIEGLVEYLNTVDTLLL NRYSLARFLSHLLELPHNPLATWESGQRSRGRNCIRHMRRSVYLPMNYVY ERSFYSRRRHADELVIHSVFQQLQSQLELRVQHNAFNLSQDLVKSLQAKV HQMRINVGNLPPNVTEQFYWDSDRRWSVGRDFYENHLNSLLYYYTLVADL ESSSDQEERDIWYSFNMHTPEFPDNIDATPYFYCLGNIIFVPYSYVKRPF FDANFWPALLYGDLANTLGHEIMHAFDTDLVDYDAQGNLRNFSDQLGEVE LYNGAVGCLNSSAVMLNERTSDVSGSRLAMQTYGGDWLTRSGNGRLYFLQ FAHFFCGDEGDQYHDSGSQRLNYALGQVPQFAEVFRCHVGSGMTSADQCP FW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9505-PA | 652 | CG9505-PA | 1..652 | 1..652 | 3526 | 100 | Plus |
CG42370-PA | 655 | CG9508-PA | 26..655 | 43..652 | 410 | 25 | Plus |
CG9507-PA | 684 | CG9507-PA | 31..684 | 41..652 | 371 | 22 | Plus |
CG4580-PA | 619 | CG4580-PA | 17..608 | 43..638 | 324 | 23.9 | Plus |
CG8550-PA | 633 | CG8550-PA | 24..619 | 42..652 | 284 | 22.5 | Plus |