BDGP Sequence Production Resources |
Search the DGRC for RE27327
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 273 |
Well: | 27 |
Vector: | pFlc-1 |
Associated Gene/Transcript | olf186-M-RA |
Protein status: | RE27327.pep: gold |
Preliminary Size: | 1744 |
Sequenced Size: | 1760 |
Gene | Date | Evidence |
---|---|---|
CG14489 | 2002-10-01 | Blastp of sequenced clone |
CG14489 | 2003-01-01 | Sim4 clustering to Release 3 |
olf186-M | 2008-04-29 | Release 5.5 accounting |
olf186-M | 2008-08-15 | Release 5.9 accounting |
olf186-M | 2008-12-18 | 5.12 accounting |
1760 bp (1760 high quality bases) assembled on 2002-10-01
GenBank Submission: BT001592
> RE27327.complete AGTTTTGAAGATCACTCGTTGCGAAGCGGACGCTTAGCACAGCGGCAAGT GAAAGCTGGAAGATATAGTTGGCAAAAATAACAAATCGATCTTCACTTCC GAACTTTTTTAACACTTGTGTGTACTTAAATGTGAACAAATATTGAACCA GATCCAACAAAGGTGGTTGGTTCACCACAAAACAAAGTAGCCCAATATCA ATGTCATGCGATCGTGAAAACACTCGATCGTTCCAAATCCGGGGTCAGAA GCTCTACGGCTGATTAACACACTCCGCATCTACGCGCTGCGAGCGAAATA AATGAAAATAAACAAAAAAACAAACAGACAAACACACAAATACGGCAAAT GCGAACAGCAACAACAAATTAACAGAAACTCGCGGAATATAGAAAAACAC GTTTCCACAAAAAGGCGATCGGAGCGAAAAAAAAACAAAAAGCAAAAAAA CAATTTAGCTAAATAACAACAAATAACACAAATTGTCATCGCTTTTGTTA TTTCGAATACGATACTTGCGCACACGCATTTGAAATTAAAGGCCCTGATT CTGGCCATTACCAAATATGTCCAAAAGCCGAGCTTGAATCGAGATCGCGG CGAGTCGAGCAGCAGCTAGCTTGTAACCCGAGCAGCCGTGACCACAGAAA ACTCATTGCAGATACTAGATATCCGCACAGTAGATATACATACATACATA TATAACCCACTATCCATATATACCGTACGCCATGGAACGTTCGCACAGCT GTAGCAATTTCGAGGGCAGGACGGGAGCCAAGGTCATCGTTGGCGCAGTG GAGCAATTGGCCGGCAGCAGTGAGCACCTGCCCAGCGTCCACTTTCCGCC CAGCAAGCCGCTGCGCAGGCGCAGAAAATTGCAGCGACAGCAGAGTGCCG TCGATACGGATGACATGGAATATGCCGCCGATCTGGAGGAGAATGCCGAT CCGGATGCACATGAGCATATGTCGCCCGTCGTCACCATGCCCATGCGCCA TATATCTGCCACCAGTACGCGTTGCCTGCGCCACGAGGAGTCCTTTGAGT CATCCAGCACGGCGCCCGAACTGAGTCCGCAGGCGCAGAGGCAACAGCGC TTCAGTAGTCTGCTCCTGCGTGACAGCTCCGTATCCGTGCAGTCGGACTC GAGTCGATATTCCAGCGTGGACAGCTTGCTGGAGGCACGCAAGCCAGATC CCGAGGCCATACTCATCAACCTGGGCTTTGGACCGCTCAGCTCCGAGGAT ATGCTGTCGCGGATACCGCGGAGGTTTCTGAAGCCCTCGCAAGTGCCTGG CATCGATACGGATGCCTTTGTGCAAAGACTGACTCTGGCGCGATCCCTGG CCGATTCGAGTGTTCTGGGCTATAGGGGTCTAACCGGAAATCCGGACATG CCGCCCTCCTCAATTGTGGCCAGCATTATGAAGCGATTCGAGGTCAATCA TCATAGGAAAAACTCCATGGGCTCCATTAAGCCCAGCATACAATAGAGCC CTTTGAATTCTTAGCCATACAACATAAGATAGTCAGCCAAATAGAGGACT TTCGCTTACGTTAATTGTTGCCAAGCGGGGTTATGGGTGACCTTTGACCT GTGACCCATGTGATCATCTTGTCTTGTCCATTAGTCATTACAAGTGCCGC GTACTTAGCTGTTTAACTGTACTATTGTATTATTATCAACTATTGTGAAC TTGTTTTAAGCATGTATTAAAGATGATATTTTATGAGACATTTTAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
olf186-M-RA | 1744 | olf186-M-RA | 1..1744 | 1..1744 | 8720 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13733874..13735622 | 1..1744 | 8410 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17846701..17848446 | 1..1746 | 8730 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17847900..17849645 | 1..1746 | 8730 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 5893..6017 | 357..482 | 149 | 60.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13733874..13735622 | 1..1744 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
olf186-M-RA | 1..765 | 732..1496 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
olf186-M-RA | 1..765 | 732..1496 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
olf186-M-RA | 1..765 | 732..1496 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
olf186-M-RA | 1..765 | 732..1496 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
olf186-M-RA | 1..765 | 732..1496 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
olf186-M-RA | 1..1744 | 1..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
olf186-M-RA | 1..1744 | 1..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
olf186-M-RA | 3..1746 | 1..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
olf186-M-RA | 1..1744 | 1..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
olf186-M-RA | 3..1746 | 1..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17846701..17848444 | 1..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17846701..17848444 | 1..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17846701..17848444 | 1..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13734206..13735949 | 1..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17847900..17849643 | 1..1744 | 100 | Plus |
Translation from 731 to 1495
> RE27327.pep MERSHSCSNFEGRTGAKVIVGAVEQLAGSSEHLPSVHFPPSKPLRRRRKL QRQQSAVDTDDMEYAADLEENADPDAHEHMSPVVTMPMRHISATSTRCLR HEESFESSSTAPELSPQAQRQQRFSSLLLRDSSVSVQSDSSRYSSVDSLL EARKPDPEAILINLGFGPLSSEDMLSRIPRRFLKPSQVPGIDTDAFVQRL TLARSLADSSVLGYRGLTGNPDMPPSSIVASIMKRFEVNHHRKNSMGSIK PSIQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11680-PA | 263 | GF11680-PA | 1..263 | 1..254 | 976 | 84.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21830-PA | 253 | GG21830-PA | 1..253 | 1..254 | 1120 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22030-PA | 262 | GH22030-PA | 1..262 | 1..254 | 744 | 64.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
olf186-M-PA | 254 | CG14489-PA | 1..254 | 1..254 | 1285 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19119-PA | 281 | GI19119-PA | 1..281 | 1..254 | 781 | 64.2 | Plus |
Dmoj\GI14586-PA | 89 | GI14586-PA | 1..89 | 166..254 | 346 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17228-PA | 310 | GL17228-PA | 1..305 | 1..249 | 867 | 65.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13023-PD | 256 | GA13023-PD | 1..251 | 1..249 | 895 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21829-PA | 249 | GM21829-PA | 1..249 | 1..254 | 1104 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11323-PA | 190 | GD11323-PA | 18..190 | 82..254 | 797 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22250-PA | 282 | GJ22250-PA | 1..282 | 1..254 | 816 | 65.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22233-PA | 309 | GK22233-PA | 1..309 | 1..254 | 735 | 59.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11906-PA | 254 | GE11906-PA | 1..254 | 1..254 | 1104 | 93.7 | Plus |
Translation from 731 to 1495
> RE27327.hyp MERSHSCSNFEGRTGAKVIVGAVEQLAGSSEHLPSVHFPPSKPLRRRRKL QRQQSAVDTDDMEYAADLEENADPDAHEHMSPVVTMPMRHISATSTRCLR HEESFESSSTAPELSPQAQRQQRFSSLLLRDSSVSVQSDSSRYSSVDSLL EARKPDPEAILINLGFGPLSSEDMLSRIPRRFLKPSQVPGIDTDAFVQRL TLARSLADSSVLGYRGLTGNPDMPPSSIVASIMKRFEVNHHRKNSMGSIK PSIQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
olf186-M-PA | 254 | CG14489-PA | 1..254 | 1..254 | 1285 | 100 | Plus |