Clone RE27406 Report

Search the DGRC for RE27406

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:274
Well:6
Vector:pFlc-1
Associated Gene/TranscriptCG42235-RC
Protein status:RE27406.pep: gold
Preliminary Size:534
Sequenced Size:2336

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14539 2002-01-01 Sim4 clustering to Release 2
CG31090 2002-05-23 Blastp of sequenced clone
CG31090 2003-01-01 Sim4 clustering to Release 3
CG31090 2008-04-29 Release 5.5 accounting
CG42235 2008-08-15 Release 5.9 accounting
CG42235 2008-12-18 5.12 accounting

Clone Sequence Records

RE27406.complete Sequence

2336 bp (2336 high quality bases) assembled on 2002-05-23

GenBank Submission: BT003514

> RE27406.complete
TGAGTGCTCGGCGGTGATTTGGATCAAACACTTGTGTGTGCTCTCATCCA
AATCGAATTGGAATTGTCCTGAATCCGAAACTCAAGGATCTCGAGAGCGT
TGATTGTGCTCGTGTTAAACTAATGCAAAAGTAATCAAAGCCGGACACAT
TAAAGTGACGCGGCTGGAAGTCCATAAAAATAAACTACATAAAAGCAACT
TGCGGTGCCGGAAATAATGTCAACCACTGCCGATCCCGTGGCGCTGGGGG
TAAACTCCCCCGTGGAGGATGTAGTGGCCAAAACCACCACAACGGTGGCC
AATGCGATTGCGAAGACAGTGGCCGTAATTAGCAGCACGGTCTCAACTAG
CTCCACAACTGGCGCCACTTCCACCATTTCAACGAGTAGTAGCACACCCA
CTACCTCGACCACTTTCGCCTACACTCCCACGCCCACTCCCACTCAATCA
GCATCCCCATCCCTGGAGGATGGTGAGGAGAAACTCAGCGTGAAGGATTT
AAGCCAGGCCCTGCAGCATTTCGGTATTGTTGATTACTTGGTCTTCATCG
CCATGTTGGCGGTCTGCGCCGTTATCGGCTTCTATTTCGGCTTTATCGAA
AAGAAGCAAAAGAAACAGAAGCTGGCCGGCAAGGACGGCGGTGGGGCGGC
GGGCGTCGAGGAGAGGCGTGGCTCGGAGGCGCTGGACTACCTGGTGGGCG
GACGGCAAATGAAAGTGTTTCCGGTCGCGCTGTCACTTGTGGCCAGCTTC
GTGTCTGGAATCTCGCTTCTGGGAACATCAACGGAAATCTATGTATATGG
CACGCAGTACGCCTTCATTCTGGTGACCCTGGCCATTTCGGGAGCTATTT
CGTGGTATATATTCCTGCCTGTATTCTGCAATCTCCAGCTGACATCCACC
TATGAGTACTTTCAATTGCGCTATGGCGCTGGCATACGCAATTTGGGCTC
GGTTCTATTTATTGTGGGCACGATGCTCTGGCTTCCTGTTGCGCTTTATG
TACCGGCCATCACCTACAATCAAGTGACTGGCACTGGCATCCATGTAATT
ACGCCCATTGTGTGCACTATCTGCACTTTCTACACGTGTGTGGGCGGACT
TAAGGCCGTCGTTTGGACAGATGTCATTCAGAGCTTTGTTATGTTTGGTT
CCATTTTGGCGGTTTGCGTCAAGGGCACCTTCGATGTGGGCGGACTGGGC
GTGGTTCTGCAACGCAATGAAGATGGCGGACGTCTTAATGCACCGGAGTT
GACTTGGGACCCCACAGTGCGATTGTCCATGTTGTCCGTGATTTTGGGTG
GCACTCTGCATAAGATCCAGTCCTCGGATGTCAACCAAGTGTCCATTCAG
CGATTCCTATCCCTCCCGAGTTATGAGCATGCCAAGCGATGTATGCTGGT
TTTCACAGTGCTCCTCATCTTCCTACTCAGCTGCTGCAGTTACATGGGCC
TGGTGTCCTATGCCGTCTATCACGACTGTGATCCCATAAGTACTAAGTTA
GCGGCTGCCGTCGACCAACTGCCATCTCTGCTAATGATGCGAACGCTGGG
CTCTTTACCTGGATTACCAGGACTCTTTGTGTCTGGCGTATTCAGCGCTG
CCCTGAGCTCACTTTCCACGGGTCTCAACTCGCTGGCATGTGTCATTACT
CAGGATATCGTAAGACCCTTGCTGAAAGTACCGATGACCGAGCGCCAGAC
GGCTTTTTGGTTGCGGGCAATTGTCGTTGTTTGCGGATTTTGCTGCCTGG
GAATGGTCAACGTCGTGGAGAAGCTGGGACAAGTGGTTCCACTGGCTACG
AGCACAGCGGCGGTTTCGATGGGTCCTTTATTGGGCATTTATTGCATGGG
CGTGGGTTTGCCTTGGGTAAAAGGAAAGAGCGTTCTCCTGGGCAGTGTAG
TGTCCTTTTTGGTATTGTCGTGGATTTGTATCAAGGCGCAGTTGGCTCAA
ATGCATGGAGAGATTCGTTATCCCAAACTTCCCGTATCGGTGGATGGCTG
TGACTATGATTTCGATAATCAAACAGTTCACGAAACAATCCACGAGTACA
GACCTTCGGAGCGAAACATCTATCACTTGTCATTCCTGTGGTATACAGCA
TTGGGCGGGTTTATTTGCACTGTGGTTTCAGTGTTGGCTGGATTCGTTTT
CGGTTGGGAGGATCTCAATAAAATGGATCCAGCCTTGATTACGCCCTGTA
TGCGGCGTTTTTTGCCCAATAAAAACTATGAGGCTGTTAAAATGCAGGAT
CTCTTTAAGCGCAAGGACGAAATTGAGTCCCAATAAGCGTTGTCAATAAA
ACATGTACTCTCTGTTCTGCAAAAAAAAAAAAAAAA

RE27406.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:58:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG42235-RC 2445 CG42235-RC 59..2379 3..2323 11605 100 Plus
CG42235-RE 2548 CG42235-RE 59..968 3..912 4535 99.8 Plus
CG42235-RA 2764 CG42235-RA 205..1110 3..908 4530 100 Plus
CG42235-RE 2548 CG42235-RE 1035..1208 979..1152 240 75.8 Plus
CG42235-RA 2764 CG42235-RA 1373..1408 1171..1206 150 94.4 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:48:07
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 21730508..21731153 101..746 3230 100 Plus
chr3R 27901430 chr3R 21738995..21739377 1496..1878 1840 98.7 Plus
chr3R 27901430 chr3R 21738665..21738914 1248..1497 1235 99.6 Plus
chr3R 27901430 chr3R 21739662..21739941 2050..2320 1140 94.6 Plus
chr3R 27901430 chr3R 21739433..21739607 1877..2051 845 98.9 Plus
chr3R 27901430 chr3R 21738453..21738610 1092..1249 790 100 Plus
chr3R 27901430 chr3R 21732986..21733147 745..906 780 98.8 Plus
chr3R 27901430 chr3R 21729993..21730090 3..100 490 100 Plus
chr3R 27901430 chr3R 21738321..21738401 1023..1103 345 95.1 Plus
chr3R 27901430 chr3R 21737957..21738024 905..972 340 100 Plus
chr3R 27901430 chr3R 21738081..21738133 972..1024 265 100 Plus
chr3R 27901430 chr3R 21736199..21736363 1042..1206 210 75.2 Plus
chr3R 27901430 chr3R 21742283..21742456 979..1152 210 74.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:46:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:48:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25907547..25908192 101..746 3230 100 Plus
3R 32079331 3R 25916031..25916413 1496..1878 1915 100 Plus
3R 32079331 3R 25916698..25916971 2050..2323 1370 100 Plus
3R 32079331 3R 25915701..25915950 1248..1497 1250 100 Plus
3R 32079331 3R 25916469..25916643 1877..2051 875 100 Plus
3R 32079331 3R 25910025..25910186 745..906 810 100 Plus
3R 32079331 3R 25915490..25915647 1092..1249 790 100 Plus
3R 32079331 3R 25907032..25907129 3..100 490 100 Plus
3R 32079331 3R 25915358..25915428 1023..1093 355 100 Plus
3R 32079331 3R 25914994..25915061 905..972 340 100 Plus
3R 32079331 3R 25915118..25915170 972..1024 265 100 Plus
3R 32079331 3R 25919305..25919478 979..1152 240 75.9 Plus
3R 32079331 3R 25913238..25913402 1042..1206 210 75.2 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:30:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 25648378..25649023 101..746 3230 100 Plus
3R 31820162 3R 25656862..25657244 1496..1878 1915 100 Plus
3R 31820162 3R 25657529..25657802 2050..2323 1370 100 Plus
3R 31820162 3R 25656532..25656781 1248..1497 1250 100 Plus
3R 31820162 3R 25657300..25657474 1877..2051 875 100 Plus
3R 31820162 3R 25650856..25651017 745..906 810 100 Plus
3R 31820162 3R 25656321..25656478 1092..1249 790 100 Plus
3R 31820162 3R 25647863..25647960 3..100 490 100 Plus
3R 31820162 3R 25656189..25656259 1023..1093 355 100 Plus
3R 31820162 3R 25655825..25655892 905..972 340 100 Plus
3R 31820162 3R 25655949..25656001 972..1024 265 100 Plus
3R 31820162 3R 25660136..25660309 979..1152 240 75.8 Plus
3R 31820162 3R 25652099..25652134 1171..1206 150 94.4 Plus
3R 31820162 3R 25654196..25654233 1169..1206 145 92.1 Plus
Blast to na_te.dros performed on 2019-03-16 01:48:05 has no hits.

RE27406.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:49:12 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 21729991..21730090 1..100 99 -> Plus
chr3R 21730508..21731153 101..746 100 -> Plus
chr3R 21732988..21733147 747..906 98 -> Plus
chr3R 21737959..21738024 907..972 100 -> Plus
chr3R 21738082..21738133 973..1024 100 -> Plus
chr3R 21738323..21738390 1025..1092 98 -> Plus
chr3R 21738454..21738608 1093..1247 100 -> Plus
chr3R 21738665..21738914 1248..1497 99 -> Plus
chr3R 21738997..21739377 1498..1878 98 -> Plus
chr3R 21739435..21739607 1879..2051 98 -> Plus
chr3R 21739664..21739941 2052..2320 94   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:06:19 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
CG42235-RC 1..2070 217..2286 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:38:02 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
CG42235-RC 1..2070 217..2286 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:09:39 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
CG42235-RC 1..2070 217..2286 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:29:45 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
CG42235-RC 1..2070 217..2286 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:42:05 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
CG42235-RC 1..2070 217..2286 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:10:46 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
CG42235-RC 1..2318 3..2320 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:38:02 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
CG42235-RC 1..2318 3..2320 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:09:39 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
CG42235-RC 1..2318 3..2320 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:29:45 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
CG42235-RC 1..2318 3..2320 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:42:05 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
CG42235-RC 9..2328 1..2320 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:49:12 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25915701..25915950 1248..1497 100 -> Plus
3R 25915491..25915645 1093..1247 100 -> Plus
3R 25907030..25907129 1..100 99 -> Plus
3R 25907547..25908192 101..746 100 -> Plus
3R 25910027..25910186 747..906 100 -> Plus
3R 25914996..25915061 907..972 100 -> Plus
3R 25915119..25915170 973..1024 100 -> Plus
3R 25915360..25915427 1025..1092 100 -> Plus
3R 25916033..25916413 1498..1878 100 -> Plus
3R 25916471..25916643 1879..2051 100 -> Plus
3R 25916700..25916968 2052..2320 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:49:12 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25915701..25915950 1248..1497 100 -> Plus
3R 25915491..25915645 1093..1247 100 -> Plus
3R 25907030..25907129 1..100 99 -> Plus
3R 25907547..25908192 101..746 100 -> Plus
3R 25910027..25910186 747..906 100 -> Plus
3R 25914996..25915061 907..972 100 -> Plus
3R 25915119..25915170 973..1024 100 -> Plus
3R 25915360..25915427 1025..1092 100 -> Plus
3R 25916033..25916413 1498..1878 100 -> Plus
3R 25916471..25916643 1879..2051 100 -> Plus
3R 25916700..25916968 2052..2320 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:49:12 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25915701..25915950 1248..1497 100 -> Plus
3R 25915491..25915645 1093..1247 100 -> Plus
3R 25907030..25907129 1..100 99 -> Plus
3R 25907547..25908192 101..746 100 -> Plus
3R 25910027..25910186 747..906 100 -> Plus
3R 25914996..25915061 907..972 100 -> Plus
3R 25915119..25915170 973..1024 100 -> Plus
3R 25915360..25915427 1025..1092 100 -> Plus
3R 25916033..25916413 1498..1878 100 -> Plus
3R 25916471..25916643 1879..2051 100 -> Plus
3R 25916700..25916968 2052..2320 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:09:39 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21742193..21742365 1879..2051 100 -> Plus
arm_3R 21742422..21742690 2052..2320 100   Plus
arm_3R 21732752..21732851 1..100 99 -> Plus
arm_3R 21733269..21733914 101..746 100 -> Plus
arm_3R 21735749..21735908 747..906 100 -> Plus
arm_3R 21740718..21740783 907..972 100 -> Plus
arm_3R 21740841..21740892 973..1024 100 -> Plus
arm_3R 21741082..21741149 1025..1092 100 -> Plus
arm_3R 21741213..21741367 1093..1247 100 -> Plus
arm_3R 21741423..21741672 1248..1497 100 -> Plus
arm_3R 21741755..21742135 1498..1878 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:02:17 Download gff for RE27406.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25648378..25649023 101..746 100 -> Plus
3R 25650858..25651017 747..906 100 -> Plus
3R 25655827..25655892 907..972 100 -> Plus
3R 25655950..25656001 973..1024 100 -> Plus
3R 25656191..25656258 1025..1092 100 -> Plus
3R 25656322..25656476 1093..1247 100 -> Plus
3R 25656532..25656781 1248..1497 100 -> Plus
3R 25656864..25657244 1498..1878 100 -> Plus
3R 25657302..25657474 1879..2051 100 -> Plus
3R 25657531..25657799 2052..2320 100   Plus
3R 25647861..25647960 1..100 99 -> Plus

RE27406.pep Sequence

Translation from 216 to 2285

> RE27406.pep
MSTTADPVALGVNSPVEDVVAKTTTTVANAIAKTVAVISSTVSTSSTTGA
TSTISTSSSTPTTSTTFAYTPTPTPTQSASPSLEDGEEKLSVKDLSQALQ
HFGIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQKLAGKDGGGAAGVEER
RGSEALDYLVGGRQMKVFPVALSLVASFVSGISLLGTSTEIYVYGTQYAF
ILVTLAISGAISWYIFLPVFCNLQLTSTYEYFQLRYGAGIRNLGSVLFIV
GTMLWLPVALYVPAITYNQVTGTGIHVITPIVCTICTFYTCVGGLKAVVW
TDVIQSFVMFGSILAVCVKGTFDVGGLGVVLQRNEDGGRLNAPELTWDPT
VRLSMLSVILGGTLHKIQSSDVNQVSIQRFLSLPSYEHAKRCMLVFTVLL
IFLLSCCSYMGLVSYAVYHDCDPISTKLAAAVDQLPSLLMMRTLGSLPGL
PGLFVSGVFSAALSSLSTGLNSLACVITQDIVRPLLKVPMTERQTAFWLR
AIVVVCGFCCLGMVNVVEKLGQVVPLATSTAAVSMGPLLGIYCMGVGLPW
VKGKSVLLGSVVSFLVLSWICIKAQLAQMHGEIRYPKLPVSVDGCDYDFD
NQTVHETIHEYRPSERNIYHLSFLWYTALGGFICTVVSVLAGFVFGWEDL
NKMDPALITPCMRRFLPNKNYEAVKMQDLFKRKDEIESQ*

RE27406.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:39:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16787-PA 470 GF16787-PA 3..469 223..689 2113 83.7 Plus
Dana\GF16785-PA 592 GF16785-PA 1..592 1..614 1525 55.6 Plus
Dana\GF21148-PA 606 GF21148-PA 1..575 90..660 1376 47.4 Plus
Dana\GF16789-PA 453 GF16789-PA 1..441 240..677 1137 52.6 Plus
Dana\GF18159-PA 547 GF18159-PA 3..545 91..686 1106 38.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:39:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11439-PA 709 GG11439-PA 247..706 230..689 2389 96.1 Plus
Dere\GG19647-PA 601 GG19647-PA 1..570 90..660 1366 46.5 Plus
Dere\GG17224-PA 587 GG17224-PA 3..585 91..686 1281 42.6 Plus
Dere\GG11441-PA 452 GG11441-PA 1..433 240..671 1144 51.5 Plus
Dere\GG23469-PA 600 GG23469-PA 13..589 101..677 1059 39.5 Plus
Dere\GG11439-PA 709 GG11439-PA 1..247 309..554 599 48.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:39:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19445-PA 1087 GH19445-PA 617..1076 230..689 1979 78.1 Plus
Dgri\GH19445-PA 1087 GH19445-PA 74..614 83..618 1570 55.8 Plus
Dgri\GH11887-PA 603 GH11887-PA 1..570 90..660 1387 46.2 Plus
Dgri\GH23999-PA 591 GH23999-PA 3..589 91..686 1318 41.6 Plus
Dgri\GH10252-PA 599 GH10252-PA 9..587 101..678 1014 37.3 Plus
Dgri\GH14123-PA 592 GH14123-PA 21..578 106..679 839 31.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG42235-PC 689 CG42235-PC 1..689 1..689 3537 100 Plus
CG42235-PE 691 CG42235-PE 1..672 1..671 2349 68.5 Plus
CG42235-PB 695 CG42235-PB 1..685 1..678 2261 64.6 Plus
CG42235-PA 695 CG42235-PA 1..685 1..678 2247 64.3 Plus
CG42235-PD 698 CG42235-PD 1..680 1..678 2142 62.7 Plus
CG9657-PB 601 CG9657-PB 1..588 90..678 1420 46.4 Plus
CG9657-PA 601 CG9657-PA 1..588 90..678 1420 46.4 Plus
CG6723-PA 587 CG6723-PA 3..571 91..681 1327 43.9 Plus
SLC5A11-PA 600 CG8451-PA 14..581 102..669 1092 40 Plus
CG31668-PC 590 CG31668-PC 6..574 102..672 1020 37.1 Plus
CG33124-PD 588 CG33124-PD 6..578 102..681 1000 35.9 Plus
CG31262-PB 579 CG31262-PB 6..575 102..685 909 34.4 Plus
CG31262-PE 579 CG31262-PE 6..575 102..685 909 34.4 Plus
salt-PC 621 CG2196-PC 24..599 101..679 895 32.8 Plus
salt-PB 622 CG2196-PB 24..600 101..679 894 32.7 Plus
CG2187-PB 623 CG2187-PB 3..583 70..666 894 32.6 Plus
CG2187-PA 623 CG2187-PA 3..583 70..666 894 32.6 Plus
Smvt-PA 591 CG2191-PA 24..573 102..669 811 32.2 Plus
CG32669-PA 604 CG32669-PA 5..526 103..647 735 31.5 Plus
CG10444-PA 587 CG10444-PA 6..531 102..644 732 32.2 Plus
CG5687-PB 683 CG5687-PB 96..617 102..644 690 29.3 Plus
CG5687-PA 683 CG5687-PA 96..617 102..644 690 29.3 Plus
CG7720-PF 681 CG7720-PF 11..586 106..671 587 28.5 Plus
CG7720-PE 681 CG7720-PE 11..586 106..671 587 28.5 Plus
CG7720-PD 681 CG7720-PD 11..586 106..671 587 28.5 Plus
CG7720-PC 681 CG7720-PC 11..586 106..671 587 28.5 Plus
CG7720-PA 681 CG7720-PA 11..586 106..671 587 28.5 Plus
CG7720-PB 681 CG7720-PB 11..586 106..671 587 28.5 Plus
CG31262-PD 128 CG31262-PD 6..126 102..230 243 42.3 Plus
CG31262-PF 89 CG31262-PF 6..81 102..181 168 46.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 03:39:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24676-PA 459 GI24676-PA 1..453 234..685 1986 79.9 Plus
Dmoj\GI24675-PA 629 GI24675-PA 19..612 22..600 1559 56.2 Plus
Dmoj\GI10060-PA 587 GI10060-PA 3..585 91..686 1337 42.6 Plus
Dmoj\GI15680-PA 581 GI15680-PA 1..546 90..660 1217 43.6 Plus
Dmoj\GI24678-PA 454 GI24678-PA 1..445 240..678 1147 51.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:39:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21803-PA 454 GL21803-PA 3..454 231..682 2099 84.5 Plus
Dper\GL21802-PA 1123 GL21802-PA 656..1114 226..684 2081 82.4 Plus
Dper\GL21802-PA 1123 GL21802-PA 82..658 82..671 1554 54.8 Plus
Dper\GL12607-PA 589 GL12607-PA 3..587 91..686 1331 43.3 Plus
Dper\GL21805-PA 446 GL21805-PA 1..446 240..686 1149 50.8 Plus
Dper\GL19397-PA 635 GL19397-PA 14..630 101..683 962 35.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:39:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30180-PF 683 GA30180-PF 80..683 82..682 2715 85.9 Plus
Dpse\GA30180-PH 716 GA30180-PH 80..707 82..684 2663 82 Plus
Dpse\GA30180-PG 619 GA30180-PG 80..606 82..604 1632 62.6 Plus
Dpse\GA30180-PJ 647 GA30180-PJ 85..647 87..686 1627 57.9 Plus
Dpse\GA21946-PA 608 GA21946-PA 1..584 90..672 1381 46.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:39:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10280-PA 646 GM10280-PA 184..643 230..689 2389 96.5 Plus
Dsec\GM17525-PA 601 GM17525-PA 1..570 90..660 1352 47 Plus
Dsec\GM10278-PA 614 GM10278-PA 1..345 1..344 1307 82.9 Plus
Dsec\GM26101-PA 587 GM26101-PA 3..585 91..686 1281 42.9 Plus
Dsec\GM13142-PA 600 GM13142-PA 13..589 101..677 1054 39.3 Plus
Dsec\GM10278-PA 614 GM10278-PA 347..612 428..685 549 42.3 Plus
Dsec\GM10280-PA 646 GM10280-PA 16..184 387..554 385 46.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:39:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21249-PA 709 GD21249-PA 247..706 230..689 2407 97 Plus
Dsim\GD16846-PA 601 GD16846-PA 1..570 90..660 1360 47.3 Plus
Dsim\GD21248-PA 537 GD21248-PA 1..345 1..344 1311 83.2 Plus
Dsim\GD21251-PA 452 GD21251-PA 1..442 240..679 1148 51.4 Plus
Dsim\GD22434-PA 578 GD22434-PA 13..567 101..677 990 38.7 Plus
Dsim\GD21249-PA 709 GD21249-PA 1..247 309..554 606 48.6 Plus
Dsim\GD21248-PA 537 GD21248-PA 347..532 428..605 410 45.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 03:39:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23894-PA 1569 GJ23894-PA 620..1082 230..689 1951 78.8 Plus
Dvir\GJ23894-PA 1569 GJ23894-PA 79..596 88..600 1594 59.8 Plus
Dvir\GJ19210-PA 602 GJ19210-PA 1..570 90..660 1360 46.4 Plus
Dvir\GJ23796-PA 590 GJ23796-PA 3..563 91..666 1343 44.1 Plus
Dvir\GJ23896-PA 451 GJ23896-PA 1..442 240..678 1135 51.1 Plus
Dvir\GJ17282-PA 591 GJ17282-PA 8..591 101..683 1080 38.3 Plus
Dvir\GJ23894-PA 1569 GJ23894-PA 1088..1549 229..688 1018 42.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:39:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12872-PA 472 GK12872-PA 9..469 231..689 1985 78.5 Plus
Dwil\GK12873-PA 623 GK12873-PA 86..606 87..601 1672 61.4 Plus
Dwil\GK16152-PA 604 GK16152-PA 1..585 90..670 1388 46.4 Plus
Dwil\GK11796-PA 590 GK11796-PA 3..560 91..666 1339 44.7 Plus
Dwil\GK12874-PA 448 GK12874-PA 1..437 240..678 1162 52.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:39:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23634-PA 709 GE23634-PA 247..706 230..689 2399 96.5 Plus
Dyak\GE15721-PA 601 GE15721-PA 1..570 90..660 1364 46.5 Plus
Dyak\GE24625-PA 587 GE24625-PA 3..585 91..686 1291 43.3 Plus
Dyak\GE23633-PA 620 GE23633-PA 1..351 1..344 1288 78.3 Plus
Dyak\GE11144-PA 600 GE11144-PA 13..589 101..677 1049 39.2 Plus
Dyak\GE23634-PA 709 GE23634-PA 1..247 309..554 607 48.6 Plus
Dyak\GE23633-PA 620 GE23633-PA 353..618 428..685 554 41.6 Plus

RE27406.hyp Sequence

Translation from 216 to 2285

> RE27406.hyp
MSTTADPVALGVNSPVEDVVAKTTTTVANAIAKTVAVISSTVSTSSTTGA
TSTISTSSSTPTTSTTFAYTPTPTPTQSASPSLEDGEEKLSVKDLSQALQ
HFGIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQKLAGKDGGGAAGVEER
RGSEALDYLVGGRQMKVFPVALSLVASFVSGISLLGTSTEIYVYGTQYAF
ILVTLAISGAISWYIFLPVFCNLQLTSTYEYFQLRYGAGIRNLGSVLFIV
GTMLWLPVALYVPAITYNQVTGTGIHVITPIVCTICTFYTCVGGLKAVVW
TDVIQSFVMFGSILAVCVKGTFDVGGLGVVLQRNEDGGRLNAPELTWDPT
VRLSMLSVILGGTLHKIQSSDVNQVSIQRFLSLPSYEHAKRCMLVFTVLL
IFLLSCCSYMGLVSYAVYHDCDPISTKLAAAVDQLPSLLMMRTLGSLPGL
PGLFVSGVFSAALSSLSTGLNSLACVITQDIVRPLLKVPMTERQTAFWLR
AIVVVCGFCCLGMVNVVEKLGQVVPLATSTAAVSMGPLLGIYCMGVGLPW
VKGKSVLLGSVVSFLVLSWICIKAQLAQMHGEIRYPKLPVSVDGCDYDFD
NQTVHETIHEYRPSERNIYHLSFLWYTALGGFICTVVSVLAGFVFGWEDL
NKMDPALITPCMRRFLPNKNYEAVKMQDLFKRKDEIESQ*

RE27406.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:16:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG42235-PC 689 CG42235-PC 1..689 1..689 3537 100 Plus
CG42235-PE 691 CG42235-PE 1..672 1..671 2349 68.5 Plus
CG42235-PB 695 CG42235-PB 1..685 1..678 2261 64.6 Plus
CG42235-PA 695 CG42235-PA 1..685 1..678 2247 64.3 Plus
CG42235-PD 698 CG42235-PD 1..680 1..678 2142 62.7 Plus