Clone RE27549 Report

Search the DGRC for RE27549

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:275
Well:49
Vector:pFlc-1
Associated Gene/Transcriptqkr58E-2-RA
Protein status:RE27549.pep: gold
Preliminary Size:1490
Sequenced Size:2680

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5821 2002-01-01 Sim4 clustering to Release 2
CG5821 2003-01-01 Sim4 clustering to Release 3
CG5821 2005-03-04 Blastp of sequenced clone
qkr58E-2 2008-04-29 Release 5.5 accounting
qkr58E-2 2008-08-15 Release 5.9 accounting
qkr58E-2 2008-12-18 5.12 accounting

Clone Sequence Records

RE27549.complete Sequence

2680 bp (2680 high quality bases) assembled on 2005-03-04

GenBank Submission: BT021292

> RE27549.complete
AGAAGCACGAGAGACAGCCCGAGAGACCGGAGTTGCCGGACCGAGCCGCT
GACATAGTAAATGTCCGAATAAAATACACACTTGGAAAAAGAGAGAAAAA
TTAGGGCCATTGGGAAGGCTGAAGTGTGCTAAGTTAGCAATCATACCGAA
TCGACAGCAAAAGCGATCGCCCGCAATCTGCGCACGGAAAATCCGAGACT
CGGCGACTTAGCAGGACGATAGAGCGACAGCGATCCCGAAGGCAGGACGA
CAAATGGCGGAGAACGGACTGCGCGTGCCAGGGTCATCCGCGGTGGCCTC
TGCGGTGGCTTCCACTGCGACGGGAGTCGGCGGTGGATCAGCAGCGGGAA
CTGCGGGGGCCGGGACAGGAGTGGTGCCCACCGGCGTCAGCGGCGGGACG
AGCAACGGGGAGCATGAGAACGAACACAACGCCAACGCAGACGGCGAGAA
GGCCCAGCCGGCGCCGGCGGTCCAGAAGTACATGCAGGAGCTCATGACGG
AGCGATCGCGCATGGAAAACCACTTCCCCCTGGCGGTGAAGCTAATTGAC
GAAGCTCTGGAGCGTGTGCAGCTAAACGGACGCATTCCCACGAGAGACCA
GTACGCCGATGTCTACCAGCAGCGCACCATCAAGCTGTCCCAAAAAGTGC
ACGTGCCCATCAAGGACAAGAAGTTCAACTATGTGGGCAAGCTACTGGGG
CCCAAGGGCAACTCACTGCGTCGCCTGCAGGAGGAGACGCAGTGCAAGAT
CGTCATACTTGGTCGCTTCTCAATGAAGGATCGCGCACGTGAGGAGGAGC
TGCGCAACTCCGCGGACGCGAAGTACGCCCACCTGAATCTTCCTCTGCAC
GTCGAGGTGTCCACCATTGCTCCGCCCGCCGAGGCGTACGCTCGGGTGGC
GTATGCCCTGGCCGAGATTCGGCGGTACCTCACGCCGGACAAGCACGATG
ACATCCGCCAAGAGCAGTACCGCGAACTCATGGAGGATCCGGAGGCGGCC
AAGAAGCTGACGCTTCGCCAGCTGCAACAGCAGTCGAATGCGGCAGCTAG
TGGTGCAGGAGGAGGAGGCGGTGGTGGAGGCGGAAACGGAAATGGCGGCG
CAGCTGGATCCGGCAGCAATAATGGCAATGGGAACCAGCGCTCCGGCGGC
AACTACAGACAAAAGTTTCAGCAACAATCACACTATCGCCACAACGAGGA
GACTGTCTATTTTCGCTCACACAACAATGCGTACCACCAGCCAAAACCCT
ATGTGCCAGCCGCCCAACGGGGCAATGCCATGCACACCACCTTGCCACCG
CAAGCAATTGTGCGAGCCTCACCGCCCGGAATGGTCGTCAGTGCGGCCAG
CTTCAATGGCCGAAATGCCGGACTGGGTAATGCCGGCGGTGGCGGAATCA
TGGCCAATAGCATCGTGGCCACCACTGGCGGTGGCATCGGTGGCGCTGTG
CCGCCTAACATGCGTTACCGTCCCGCTGCCCCCTACCAGTTTGTCAAGAA
ATAATACAGATGGGAGGATGCACCGCCCGCTGCCGTTCGCTGTTTGTTCA
ACTATTCCTCACCATCATTGATGCCTCATCCGGAAGTATTCACGCCCATC
TGTCATACCCATCCAAACACCCACAACCACACACAGCTCCAAAGATTTCG
GCAGGGTGGAAACCAAAACGAAACGAATGAGTAAATCTATGTTTAAGAAA
ACTAGCCTAAGTAGACAAATGCTCCGAGGAACAGACGAACACCTCAGCCA
CCCAACCAAAACCAAAACTAACCGACCAGACAAACACCCACCACCCCACA
CGCACGCAACCTCTTCTCGAGGATTGGGTTCGAAGGATCACGAGGGTCTG
CGATCTAAGACTTTGGAATCCGTGTGTTGGGCCCTGCGAGCATTTGGAAG
AGAAGAATTGAAGAAGAAGAACGAGGAGGAGGTGGAGAACGCCTCGATGT
TGGATCGGGCCGAATCGAATGGACGCATTCAAGGTTGGTCCCAGTCGAGC
CAAATGTCCTTGTTTTGTTTTGTCGCATATTATTAACATTTTAATTTTAC
CACTGACGCGTGCGAAGATTTCATCACTTTGTAATTTATATAAATGAATA
TATATATCTCCTTATGCTTACTATCATACGTATCCTTCTCGCAGTCGCTT
TAACTCTATTGCTTTTCCAACTCTGCGTTTAAGTTTATCCCATTTTTTGT
TGTAATGCGTTTTGTATTATGTTTACGTTTAGAAGAGGAGGCTTCTTATT
TTTATTTGTTACGTCGCCAGGACAGAAAAAGCAACTGCAAACGATCATGA
ATAATATATATAACAAGTATATACAAGCGGTATGATTTATAACACATAGT
GCATATGCAACACCACACGATCATACGCGCGTACGCATATTCAAAACATC
AGCATATTCACCTAAAGCCGTAAAGTTTAAACCAAATGAACATTAGAAAC
GCAAACGAGAATCTAAAACACAGATCGGAGCAGGAGACCGATTTCGCCTA
CGATAATGCAAATGCAACGGACATAGCAAACCACATACGATCAGAGAAAA
TATGCAAACACATACATACATACATAATTGTTATTGTTGTTAAAAGCAAC
TAAAATTGTAATAGAAATTATGCAAATATACATACGAATATGACGACAAA
TGTTAAAAAAAAATAAAAAAAAAAAAAAAA

RE27549.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:53:44
Subject Length Description Subject Range Query Range Score Percent Strand
qkr58E-2-RA 2955 qkr58E-2-RA 60..2715 1..2656 13280 100 Plus
CG4021-RA 1229 CG4021-RA 410..489 671..750 250 87.5 Plus
CG3927.a 1131 CG3927.a 419..489 686..756 235 88.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:22:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 18304206..18305220 1642..2656 5060 99.9 Plus
chr2R 21145070 chr2R 18302942..18303547 553..1158 3030 100 Plus
chr2R 21145070 chr2R 18302329..18302882 1..554 2770 100 Plus
chr2R 21145070 chr2R 18303765..18304152 1257..1644 1925 99.7 Plus
chr2R 21145070 chr2R 18303607..18303712 1154..1259 530 100 Plus
chr2R 21145070 chr2R 18481670..18481740 686..756 250 90.1 Plus
chr2R 21145070 chr2R 17660209..17660287 672..750 245 87.3 Plus
chr2R 21145070 chr2R 18297491..18297555 750..686 235 90.8 Minus
chr2R 21145070 chr2R 13358220..13358464 672..916 220 72.7 Plus
chr2L 23010047 chr2L 20862226..20862290 750..686 220 89.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 20:46:16
Subject Length Description Subject Range Query Range Score Percent Strand
CR9337-RA 933 CR9337-RA 18..82 686..750 220 89.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:22:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22417690..22418704 1642..2656 5075 100 Plus
2R 25286936 2R 22416426..22417031 553..1158 3030 100 Plus
2R 25286936 2R 22415813..22416366 1..554 2770 100 Plus
2R 25286936 2R 22417249..22417636 1257..1644 1940 100 Plus
2R 25286936 2R 22417091..22417196 1154..1259 530 100 Plus
2R 25286936 2R 21773807..21773885 672..750 245 87.3 Plus
2R 25286936 2R 22410975..22411039 750..686 235 90.8 Minus
2R 25286936 2R 22595165..22595235 686..756 235 88.7 Plus
2R 25286936 2R 17471170..17471414 672..916 220 72.7 Plus
2L 23513712 2L 20863694..20863758 750..686 220 89.2 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:42:42
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 22418889..22419903 1642..2656 5075 100 Plus
2R 25260384 2R 22417625..22418230 553..1158 3030 100 Plus
2R 25260384 2R 22417012..22417565 1..554 2770 100 Plus
2R 25260384 2R 22418448..22418835 1257..1644 1940 100 Plus
2R 25260384 2R 22418290..22418395 1154..1259 530 100 Plus
2R 25260384 2R 21775006..21775084 672..750 245 87.3 Plus
2R 25260384 2R 22596364..22596434 686..756 235 88.7 Plus
2R 25260384 2R 22412174..22412238 750..686 235 90.7 Minus
2L 23513712 2L 20863694..20863758 750..686 220 89.2 Minus
2R 25260384 2R 17472369..17472447 672..750 200 83.5 Plus
Blast to na_te.dros performed 2019-03-15 16:22:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dkoe\Gandalf 979 Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). 812..937 2664..2543 116 57.1 Minus

RE27549.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:23:05 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 18302329..18302882 1..554 100 -> Plus
chr2R 18302944..18303547 555..1158 100 -> Plus
chr2R 18303612..18303712 1159..1259 100 -> Plus
chr2R 18303768..18304152 1260..1644 99 -> Plus
chr2R 18304209..18305220 1645..2656 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:06:28 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 1..1251 254..1504 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:26:04 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 1..1251 254..1504 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:01:08 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 1..1251 254..1504 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:10:12 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 1..1251 254..1504 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:34:45 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 1..1251 254..1504 100   Plus
Sim4 to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:46:17 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:28:50 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 1..2656 1..2656 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:26:04 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 1..2656 1..2656 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:01:08 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 5..2658 1..2654 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:10:12 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 1..2656 1..2656 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:34:45 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 5..2658 1..2654 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:23:05 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22415813..22416366 1..554 100 -> Plus
2R 22416428..22417031 555..1158 100 -> Plus
2R 22417096..22417196 1159..1259 100 -> Plus
2R 22417252..22417636 1260..1644 100 -> Plus
2R 22417693..22418704 1645..2656 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:23:05 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22415813..22416366 1..554 100 -> Plus
2R 22416428..22417031 555..1158 100 -> Plus
2R 22417096..22417196 1159..1259 100 -> Plus
2R 22417252..22417636 1260..1644 100 -> Plus
2R 22417693..22418704 1645..2656 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:23:05 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22415813..22416366 1..554 100 -> Plus
2R 22416428..22417031 555..1158 100 -> Plus
2R 22417096..22417196 1159..1259 100 -> Plus
2R 22417252..22417636 1260..1644 100 -> Plus
2R 22417693..22418704 1645..2656 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:01:08 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18303318..18303871 1..554 100 -> Plus
arm_2R 18303933..18304536 555..1158 100 -> Plus
arm_2R 18304601..18304701 1159..1259 100 -> Plus
arm_2R 18304757..18305141 1260..1644 100 -> Plus
arm_2R 18305198..18306209 1645..2656 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:46:37 Download gff for RE27549.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22417012..22417565 1..554 100 -> Plus
2R 22417627..22418230 555..1158 100 -> Plus
2R 22418295..22418395 1159..1259 100 -> Plus
2R 22418451..22418835 1260..1644 100 -> Plus
2R 22418892..22419903 1645..2656 100   Plus

RE27549.pep Sequence

Translation from 253 to 1503

> RE27549.pep
MAENGLRVPGSSAVASAVASTATGVGGGSAAGTAGAGTGVVPTGVSGGTS
NGEHENEHNANADGEKAQPAPAVQKYMQELMTERSRMENHFPLAVKLIDE
ALERVQLNGRIPTRDQYADVYQQRTIKLSQKVHVPIKDKKFNYVGKLLGP
KGNSLRRLQEETQCKIVILGRFSMKDRAREEELRNSADAKYAHLNLPLHV
EVSTIAPPAEAYARVAYALAEIRRYLTPDKHDDIRQEQYRELMEDPEAAK
KLTLRQLQQQSNAAASGAGGGGGGGGGNGNGGAAGSGSNNGNGNQRSGGN
YRQKFQQQSHYRHNEETVYFRSHNNAYHQPKPYVPAAQRGNAMHTTLPPQ
AIVRASPPGMVVSAASFNGRNAGLGNAGGGGIMANSIVATTGGGIGGAVP
PNMRYRPAAPYQFVKK*

RE27549.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:16:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11890-PA 390 GF11890-PA 1..390 1..416 1565 84.6 Plus
Dana\GF13124-PA 558 GF13124-PA 47..268 54..273 628 53.6 Plus
Dana\GF13022-PA 316 GF13022-PA 25..228 74..275 589 55.9 Plus
Dana\GF13021-PA 396 GF13021-PA 61..228 76..242 509 53.6 Plus
Dana\GF11894-PA 471 GF11894-PA 25..127 140..242 421 70.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:16:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22189-PA 416 GG22189-PA 1..416 1..416 2159 98.8 Plus
Dere\GG20683-PA 428 GG20683-PA 67..290 75..297 618 53.9 Plus
Dere\GG20697-PA 316 GG20697-PA 26..234 74..280 593 55 Plus
Dere\GG20696-PA 396 GG20696-PA 61..228 76..242 514 54.2 Plus
Dere\GG21049-PA 472 GG21049-PA 25..127 140..242 417 69.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:17:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21366-PA 395 GH21366-PA 1..395 1..416 1551 75.1 Plus
Dgri\GH21401-PA 448 GH21401-PA 31..283 43..278 635 51.4 Plus
Dgri\GH20535-PA 319 GH20535-PA 26..234 74..280 608 56.5 Plus
Dgri\GH20534-PA 399 GH20534-PA 26..231 33..242 514 47.6 Plus
Dgri\GH21368-PA 429 GH21368-PA 3..155 119..273 455 55.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:23:25
Subject Length Description Subject Range Query Range Score Percent Strand
qkr58E-2-PB 416 CG5821-PB 1..416 1..416 2160 100 Plus
qkr58E-2-PC 416 CG5821-PC 1..416 1..416 2160 100 Plus
qkr58E-2-PA 416 CG5821-PA 1..416 1..416 2160 100 Plus
qkr54B-PD 428 CG4816-PD 33..295 44..314 630 48.6 Plus
qkr54B-PB 428 CG4816-PB 33..295 44..314 630 48.6 Plus
qkr54B-PA 428 CG4816-PA 33..295 44..314 630 48.6 Plus
qkr54B-PE 617 CG4816-PE 33..295 44..314 630 48.6 Plus
qkr58E-3-PD 317 CG3584-PD 26..228 74..274 571 56.2 Plus
qkr58E-3-PB 317 CG3584-PB 26..228 74..274 571 56.2 Plus
qkr58E-3-PC 317 CG3584-PC 26..228 74..274 571 56.2 Plus
CG3927-PA 270 CG3927-PA 12..206 61..251 563 59 Plus
nsr-PB 340 CG3875-PB 9..211 53..251 560 56.7 Plus
nsr-PA 340 CG3875-PA 9..211 53..251 560 56.7 Plus
CG4021-PA 319 CG4021-PA 30..206 74..250 529 59.8 Plus
qkr58E-1-PC 357 CG3613-PC 26..228 36..242 511 49 Plus
qkr58E-1-PD 379 CG3613-PD 26..228 36..242 511 49 Plus
qkr58E-1-PA 396 CG3613-PA 26..228 36..242 511 49 Plus
CG10384-PE 492 CG10384-PE 9..196 101..276 449 50 Plus
CG10384-PD 492 CG10384-PD 9..196 101..276 449 50 Plus
how-PF 418 CG10293-PF 67..274 65..269 229 28.7 Plus
how-PB 375 CG10293-PB 67..252 65..242 228 28.6 Plus
how-PC 380 CG10293-PC 67..252 65..242 228 28.6 Plus
how-PE 404 CG10293-PE 67..252 65..242 228 28.6 Plus
how-PD 405 CG10293-PD 67..252 65..242 228 28.6 Plus
how-PA 405 CG10293-PA 67..252 65..242 228 28.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:17:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20561-PA 386 GI20561-PA 1..386 1..416 1421 74.8 Plus
Dmoj\GI18580-PA 442 GI18580-PA 23..279 31..275 641 50.8 Plus
Dmoj\GI18981-PA 318 GI18981-PA 26..228 74..274 594 56.7 Plus
Dmoj\GI18980-PA 401 GI18980-PA 64..231 76..242 514 54.2 Plus
Dmoj\GI20563-PA 463 GI20563-PA 47..177 140..271 416 60.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:17:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17545-PA 383 GL17545-PA 31..383 50..416 1533 89.1 Plus
Dper\GL11428-PA 639 GL11428-PA 63..289 75..297 645 54.6 Plus
Dper\GL16924-PA 214 GL16924-PA 25..214 34..228 467 46.4 Plus
Dper\GL16926-PA 261 GL16926-PA 29..126 74..170 317 60.2 Plus
Dper\GL24013-PA 402 GL24013-PA 72..249 73..242 213 28.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:17:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19155-PA 383 GA19155-PA 31..383 50..416 1533 89.1 Plus
Dpse\GA18453-PA 430 GA18453-PA 63..289 75..297 634 54.6 Plus
Dpse\GA17537-PA 325 GA17537-PA 29..237 74..280 590 55 Plus
Dpse\GA17559-PA 393 GA17559-PA 25..228 34..242 517 47.6 Plus
Dpse\GA10291-PB 428 GA10291-PB 25..127 140..242 407 68.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:17:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15910-PA 416 GM15910-PA 1..416 1..416 2167 99.3 Plus
Dsec\GM21780-PA 567 GM21780-PA 33..238 44..244 635 57.8 Plus
Dsec\GM15642-PA 317 GM15642-PA 26..234 74..280 589 55 Plus
Dsec\GM15930-PA 482 GM15930-PA 123..346 33..250 575 52.2 Plus
Dsec\GM15922-PA 322 GM15922-PA 35..213 74..250 556 59.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:17:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11668-PA 416 GD11668-PA 1..416 1..416 2171 99.5 Plus
Dsim\GD11271-PA 428 GD11271-PA 33..238 44..244 630 57.8 Plus
Dsim\GD25131-PA 254 GD25131-PA 26..229 74..275 590 55.9 Plus
Dsim\GD11683-PA 557 GD11683-PA 243..421 74..250 556 59.2 Plus
Dsim\GD11626-PA 315 GD11626-PA 27..226 74..273 528 52.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:17:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22415-PA 382 GJ22415-PA 27..382 53..416 1371 80.4 Plus
Dvir\GJ20374-PA 450 GJ20374-PA 49..251 46..244 620 58.1 Plus
Dvir\GJ19943-PA 318 GJ19943-PA 26..228 74..274 601 57.1 Plus
Dvir\GJ19941-PA 400 GJ19941-PA 64..231 76..242 509 54.2 Plus
Dvir\GJ19910-PA 424 GJ19910-PA 3..155 119..273 454 55.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:17:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20819-PA 408 GK20819-PA 1..408 1..416 1606 81.4 Plus
Dwil\GK22901-PA 428 GK22901-PA 35..260 46..273 633 53.9 Plus
Dwil\GK20825-PA 322 GK20825-PA 5..231 61..276 598 53.3 Plus
Dwil\GK20824-PA 407 GK20824-PA 69..236 76..242 517 54.8 Plus
Dwil\GK17902-PA 435 GK17902-PA 3..127 119..242 448 64 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:17:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14183-PA 416 GE14183-PA 1..416 1..416 2154 98.8 Plus
Dyak\GE11667-PA 428 GE11667-PA 67..290 75..297 617 53.9 Plus
Dyak\kep1-PA 317 GE11681-PA 26..234 74..280 590 55 Plus
Dyak\GE11680-PA 395 GE11680-PA 60..227 76..242 514 54.2 Plus
Dyak\GE13991-PA 474 GE13991-PA 25..127 140..242 417 69.9 Plus

RE27549.hyp Sequence

Translation from 253 to 1503

> RE27549.hyp
MAENGLRVPGSSAVASAVASTATGVGGGSAAGTAGAGTGVVPTGVSGGTS
NGEHENEHNANADGEKAQPAPAVQKYMQELMTERSRMENHFPLAVKLIDE
ALERVQLNGRIPTRDQYADVYQQRTIKLSQKVHVPIKDKKFNYVGKLLGP
KGNSLRRLQEETQCKIVILGRFSMKDRAREEELRNSADAKYAHLNLPLHV
EVSTIAPPAEAYARVAYALAEIRRYLTPDKHDDIRQEQYRELMEDPEAAK
KLTLRQLQQQSNAAASGAGGGGGGGGGNGNGGAAGSGSNNGNGNQRSGGN
YRQKFQQQSHYRHNEETVYFRSHNNAYHQPKPYVPAAQRGNAMHTTLPPQ
AIVRASPPGMVVSAASFNGRNAGLGNAGGGGIMANSIVATTGGGIGGAVP
PNMRYRPAAPYQFVKK*

RE27549.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:35:55
Subject Length Description Subject Range Query Range Score Percent Strand
qkr58E-2-PB 416 CG5821-PB 1..416 1..416 2160 100 Plus
qkr58E-2-PC 416 CG5821-PC 1..416 1..416 2160 100 Plus
qkr58E-2-PA 416 CG5821-PA 1..416 1..416 2160 100 Plus
qkr54B-PD 428 CG4816-PD 33..295 44..314 630 48.6 Plus
qkr54B-PB 428 CG4816-PB 33..295 44..314 630 48.6 Plus