Clone RE27685 Report

Search the DGRC for RE27685

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:276
Well:85
Vector:pFlc-1
Associated Gene/TranscriptDmtn-RD
Protein status:RE27685.pep: gold
Preliminary Size:3443
Sequenced Size:3759

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1021 2004-01-14 Blastp of sequenced clone
CG1021 2008-04-29 Release 5.5 accounting
CG1021 2008-08-15 Release 5.9 accounting
CG1021 2008-12-18 5.12 accounting

Clone Sequence Records

RE27685.complete Sequence

3759 bp (3759 high quality bases) assembled on 2004-01-14

GenBank Submission: BT011461

> RE27685.complete
ACTTTGTGTTGATTTTTAGCGGCGGTTGGTCGTGTGTCGGATAAAGCGGA
ACGAAGACGAAGGCGAAGAGCAGACGGAGGCGTCAAGTCAAACAAAAGTA
AAGTGCAGCAACTGGCAGCGCAGACAAGTCGAAAGGGCAGCCAATTAAAT
GTAAGAAGCGACGTCCGCTGCTTTACAACAAGTATCGCTGATTGTCCAGC
CGAGTAACAGTATTTTTCACGAGGTGCGCAGAGCGAAAGGAAAATCAAAG
AGGAAAATCTAATACGCAAAAAGTGAAGAGCCAAATTGTTGTTAACAGAG
TGTGTGCGTGTGTGTGCTGAGTGCGGCAGTTGTTGTTTTATAGGTGAGAG
AGAAAATCGGAAAAAAGGGCGTCGCAGTTTGAAAATTGATGTGTGCATAA
AAATCAAGCGCTGCAGCAGCCAAAAAGCGAGAAGAGAGCGCGAGGCAGAG
AGCGTGCAAAGCGGTCAGCGAGAGAGCGGGTGGCTGCTGCACCTTCATAA
CTGTTGTTGCAAAGTCAGCGAAATCGTGGTTATTGAATGGCAGCCAGCAA
TAATGGACACAACGCCTAATGCGGCCCCTAATCCGAACCAGAATCGGGAC
TTCGTAACGCTGAAGCCCCTGCGTCCATCCCGCGGTTCCAGCTCGAATCT
GCGCGCCAGTCGCTCACCCTCTGCCAGCCGCAGCACCGAGCAAATGAAAA
CACGCGATTTAAACGCTCTTAAACTGCCTGCCACTGCTTCTTCTTCTCCC
TGATTCTTTTGTCTCTGTTCTTCTTTGTTGTCTGTCTCTTTCCGCGACTC
AAAGACAGGCAGTCCAGCTGTCAATAAAAAACTGAAATAACTCTTTTAAA
CACTTATTCATCATACATTCATCAAATAAGCTAAACCATAAATCAGCGCT
TGTGTGTGAGCCAACTACACATTTTCAAGCTCAAAAGATCGAGTGAATAA
TTCGATTAAAGAAACTAAAAACTATTTTTATAAAACCGTGCTCTAAAAAA
ACATTACGTTCATAGAAATTCTATGAGCAAGCAATTCTTACAATCAATTG
TGATTAAATTAAAATGGAATAACCAGCCGGAATCGCATCATTAAGATAAT
CTATCAAATTCTTTTAAATCATTTTAACTAAAACTATTATAAACTCTAAA
TAAAGAAACTTTGCACCATTACAAAAGTAGGATAAATCTATTTTCAAATG
AAATAATTTAAATGTAATAAGCAAGACATGTATATGAAATTAAGACATAT
AAAACAAAAGAGCTAAACTTAAAGATAACTCATTACATCACCATCCATCC
CACCACACAATGATCGTAAATAACTGAACTTTTTTGTGCTGCTTCACACG
CGCCTCATGATCAACAAAATTTGAGCAAAGACAAAAAACGCAGATAATTC
TTACAAAATAACCCAAGTCGTACCTTTCTATGCGCCACAATTCGCCAGTG
TCCCGGGAGCGAGCCAGCGAGGCAGCGGCAGCCACTCAGACAGCAGCAGC
CACAGCGGGAGGAGCAACTGCCCACTCAGCCGGAGGAACTGCGGGAGGAT
CTGCAGCAGCGACGACAACGGCTGGAGGGGCCACGTCCGGATCCGGAACA
GCCTCGGCGAACACGAACAGCAATTCCTCGGCCTCATCCAGCACAGTGGC
AGCTGCACAGGCGGCTGTCTACAGCGGCGGCAACACGGTGACCGGAAGTT
TGGGCAGCGCCGGGGTGGTGGCTCGTGGCTTCCGCAGCCACAGTCCCACC
CACCGGCGGAGGAGTCGCGAGCGCCAGCGACGTACGCATGGCTCTGATCA
GGGCGGTCTGCTGGCCTACAGCGGTCTCGTTGGCGTCAACGACATGACGG
ATTTCTTGGGTCCACAGCAGGGCGGAGGAGGAGGTGGCGGTGGTGGTGGT
GGCGGTGGTGGTGGTGGTGGAAGCGCCGGCACGGGCAGTGGTCTGGAGGA
TTCCCGCCTCAGTGGCAACGAGGACTACTACTCGTCCTTCGTCTCTGACG
AGTTTGACAGCAGCAAGAAGGTCCATCGCCGCTGCCACGAACGCAGCTCC
AGCGTTCAGGCCATCGACCGATTGAACACGAAGATCCAATGCACCAAGGA
GTCCATCCGACAGGAGCAAACTGCCAGAGACGATAATGTCAACGAGTATC
TTAAGTTGGCAGCCAGTGCAGACAAGCAGCAGCTGCAGCGCATCAAGGCT
GTCTTTGAGAAAAAGAACCAGAAGAGCGCACACAATATCTCGCAGCTGCA
GAAAAAGCTGGACAACTACACGAAGCGGGCCAAGGACTTGCAGAATCACC
AGTTCCAGACGAAGAGCCAGCACCGTCAACCGCGCGAGGTGCTGCGGGAT
GTCGGCCAGGGTCTGCGCAACGTGGGAGGCAACATCCGCGATGGCATCAC
CGGCTTCTCCGGTTCGGTGATGTCCAAGCCACGGGAGTTTGCGCACTTGA
TCAAGAACAAGTTTGGCAGCGCCGACAACATCAACCAGATGAGCGAGGCC
GAACTACAGGGCATGCAGTCTGCCAATGCCGATGTTTTGGGCAGCGAGCG
TTTGCAGCAAGTGCCTGGAGCCGGAACCTCGACGGGCTCAGGCGGCGGCG
GGCAGAACAACAACACCGGCGGAGCGGGAAGCGGGACGGGAAAGTTCAAC
AGTGACAATGGCAGCGAATGCAGCAGCGTAACGAGCGAAAGCATACCGGG
AGGGTCTGGTAAAAGCCAGTCGGGAGCCAGCCAATACCACATAGTGCTCA
AGACATTGCTAACAGAGCTGGCCGAGCGAAAGGCCGAAAACGAGAAGCTC
AAGGAGCGCATCGAACGACTCGAGACGGGCCAAAAGGAATTCAACAATCT
GACCGCCACACTCGAAAGTGAACGCTATCGTGCCGAGGGACTCGAGGAGC
AAATCAATGACTTGACGGAATTACATCAGAATGAAATTGAGAATCTGAAA
CAAACGATTGCCGACATGGAGGAGAAAGTACAATACCAAAGCGATGAAAG
ACTACGTGACGTCAACGAAGTGCTCGAGAACTGTCAAACGAGGATATCAA
AAATGGAGCACATGTCGCAGCAACAATATGTCACCGTCGAGGGCATTGAT
AATTCGAATGCGCGGGCCTTGGTTGTGAAACTCATCAATGTGGTATTAAC
GATACTGCAAGTGGTGCTCCTGCTTGTGGCCACCGCTGCAGGCATCATAA
TGCCTTTTCTCAAAACGAGGGTTCGCGTTCTCACAACGTTTTTGTCTATT
TGTTTCGTCATCTTTGTGATACGACAGTGGCCGGATGTCCAGGACATTGG
ATCCGGCCTGGTGCGACATCTCAAGCAATCGCTGGTGGTGAAGTAAACTA
CGTGGGTTTGGTGGCCACCGTCTCATCTACCGGGTAGTTGACACGTTCTT
TAGTTATGTATCCTAAGTTCTAAAGTGCATATGTTGTATATAGCTTATCG
ATAACGATTATAACAATAATTTTTAACTGAAATTGTATCAATTATCAACA
CGAACACACCCGAGAAACTGTACAAAATATTCATATACCCTATCACACAC
ACACCTAATCATCACACCACACTCTCGCATCAAATCTAGCAAAATTGATT
TAAACTATGTAATAACTTGAAAATGCTGACATGTCTCCGTGCATTACTCA
CTATATTTGAACATACATAATTTATGTATTACCTATATAAAATATTTACA
TTACTATAAAATAATTGAAAATATATAAAAAGAAAGTTTGTATAAAAAAA
AAAAAAAAA

RE27685.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:08:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG1021-RF 3743 CG1021-RF 1..3743 1..3743 18685 99.9 Plus
CG1021-RD 3825 CG1021-RD 777..3825 695..3743 15230 99.9 Plus
CG1021-RE 3459 CG1021-RE 411..3459 695..3743 15230 99.9 Plus
CG1021-RD 3825 CG1021-RD 3..696 1..694 3455 99.8 Plus
CG1021-RE 3459 CG1021-RE 147..330 511..694 905 99.4 Plus
CG1021-RE 3459 CG1021-RE 1..150 1..150 750 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:54:55
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 2217003..2218440 2132..695 7130 99.7 Minus
chr3R 27901430 chr3R 2214860..2215385 3743..3218 2630 100 Minus
chr3R 27901430 chr3R 2231085..2231598 514..1 2555 99.8 Minus
chr3R 27901430 chr3R 2216284..2216793 2705..2196 2550 100 Minus
chr3R 27901430 chr3R 2219430..2219611 694..513 910 100 Minus
chr3R 27901430 chr3R 2215455..2215632 3220..3043 890 100 Minus
chr3R 27901430 chr3R 2216087..2216208 2824..2703 610 100 Minus
chr3R 27901430 chr3R 2215709..2215825 3043..2927 585 100 Minus
chr3R 27901430 chr3R 2215900..2216006 2929..2823 535 100 Minus
chr3R 27901430 chr3R 2216858..2216924 2198..2132 335 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:46:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:54:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6391305..6392742 2132..695 7175 99.9 Minus
3R 32079331 3R 6389159..6389687 3746..3218 2645 100 Minus
3R 32079331 3R 6405378..6405891 514..1 2555 99.8 Minus
3R 32079331 3R 6390586..6391095 2705..2196 2550 100 Minus
3R 32079331 3R 6393732..6393913 694..513 910 100 Minus
3R 32079331 3R 6389757..6389934 3220..3043 890 100 Minus
3R 32079331 3R 6390389..6390510 2824..2703 610 100 Minus
3R 32079331 3R 6390011..6390127 3043..2927 585 100 Minus
3R 32079331 3R 6390202..6390308 2929..2823 535 100 Minus
3R 32079331 3R 6391160..6391226 2198..2132 335 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:53:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 6132136..6133573 2132..695 7175 99.9 Minus
3R 31820162 3R 6129990..6130518 3746..3218 2645 100 Minus
3R 31820162 3R 6146209..6146722 514..1 2555 99.8 Minus
3R 31820162 3R 6131417..6131926 2705..2196 2550 100 Minus
3R 31820162 3R 6134563..6134744 694..513 910 100 Minus
3R 31820162 3R 6130588..6130765 3220..3043 890 100 Minus
3R 31820162 3R 6131220..6131341 2824..2703 610 100 Minus
3R 31820162 3R 6130842..6130958 3043..2927 585 100 Minus
3R 31820162 3R 6131033..6131139 2929..2823 535 100 Minus
3R 31820162 3R 6131991..6132057 2198..2132 335 100 Minus
Blast to na_te.dros performed 2019-03-16 04:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6897 1472..1622 192 61.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6683..6910 1438..1667 190 56.7 Plus
McClintock 6450 McClintock McCLINTOCK 6450bp 767..1237 933..1388 180 53.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2518 1472..1657 179 59.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6782..6942 1465..1622 176 58.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6831..6956 1474..1605 169 61.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6778..6956 1472..1650 166 57.9 Plus
roo 9092 roo DM_ROO 9092bp 1063..1157 1472..1572 150 63.4 Plus
Dtei\I-element 5386 Dtei\I-element DTEII 5386bp 2508..2617 1205..1322 147 64.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2796..2929 1465..1591 140 59.7 Plus
I-element 5371 I-element DMIFACA 5371bp Derived from M14954 (g157749) (Rel. 44, Last updated, Version 2). 2475..2668 1202..1397 137 55.1 Plus
McClintock 6450 McClintock McCLINTOCK 6450bp 779..941 1126..1278 132 60.6 Plus
Dsub\bilbo 5540 Dsub\bilbo 5540bp Derived from U73803 (Rel. 54, Last updated, Version 1). 5138..5206 1493..1425 129 65.2 Minus
Quasimodo 7387 Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. 4077..4416 947..1285 124 54.2 Plus
gypsy9 5349 gypsy9 GYPSY9 5349bp 395..585 1190..1388 120 55 Plus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 598..708 1580..1472 118 57.7 Minus
Juan 4236 Juan JUAN 4236bp 3752..3813 3438..3498 118 67.7 Plus

RE27685.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:55:51 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 2214920..2215383 3220..3683 100 <- Minus
chr3R 2215456..2215631 3044..3219 100 <- Minus
chr3R 2215709..2215822 2930..3043 100 <- Minus
chr3R 2215900..2216004 2825..2929 100 <- Minus
chr3R 2216087..2216207 2704..2824 100 <- Minus
chr3R 2216286..2216791 2198..2703 100 <- Minus
chr3R 2216859..2216923 2133..2197 100 <- Minus
chr3R 2217003..2218440 695..2132 97 <- Minus
chr3R 2219430..2219609 515..694 100 <- Minus
chr3R 2231085..2231598 1..514 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:07:19 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
CG1021-RD 1..1917 1430..3346 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:42:04 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
CG1021-RD 1..1917 1430..3346 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:44:40 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
Dmtn-RF 1..1917 1430..3346 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:30:49 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
CG1021-RE 1..1917 1430..3346 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:53:27 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
Dmtn-RF 1..1917 1430..3346 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:07:18 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
CG1021-RF 1..3743 1..3743 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:42:04 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
CG1021-RF 1..3743 1..3743 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:44:40 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
Dmtn-RF 5..3747 1..3743 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:30:49 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
CG1021-RF 1..3743 1..3743 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:53:27 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
Dmtn-RF 5..3747 1..3743 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:55:51 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6389758..6389933 3044..3219 100 <- Minus
3R 6390011..6390124 2930..3043 100 <- Minus
3R 6390202..6390306 2825..2929 100 <- Minus
3R 6390389..6390509 2704..2824 100 <- Minus
3R 6390588..6391093 2198..2703 100 <- Minus
3R 6389162..6389685 3220..3743 100 <- Minus
3R 6391161..6391225 2133..2197 100 <- Minus
3R 6391305..6392742 695..2132 99 <- Minus
3R 6393732..6393911 515..694 100 <- Minus
3R 6405378..6405891 1..514 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:55:51 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6389758..6389933 3044..3219 100 <- Minus
3R 6390011..6390124 2930..3043 100 <- Minus
3R 6390202..6390306 2825..2929 100 <- Minus
3R 6390389..6390509 2704..2824 100 <- Minus
3R 6390588..6391093 2198..2703 100 <- Minus
3R 6389162..6389685 3220..3743 100 <- Minus
3R 6391161..6391225 2133..2197 100 <- Minus
3R 6391305..6392742 695..2132 99 <- Minus
3R 6393732..6393911 515..694 100 <- Minus
3R 6405378..6405891 1..514 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:55:51 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6389758..6389933 3044..3219 100 <- Minus
3R 6390011..6390124 2930..3043 100 <- Minus
3R 6390202..6390306 2825..2929 100 <- Minus
3R 6390389..6390509 2704..2824 100 <- Minus
3R 6390588..6391093 2198..2703 100 <- Minus
3R 6389162..6389685 3220..3743 100 <- Minus
3R 6391161..6391225 2133..2197 100 <- Minus
3R 6391305..6392742 695..2132 99 <- Minus
3R 6393732..6393911 515..694 100 <- Minus
3R 6405378..6405891 1..514 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:44:40 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2219454..2219633 515..694 100 <- Minus
arm_3R 2214884..2215407 3220..3743 100 <- Minus
arm_3R 2215480..2215655 3044..3219 100 <- Minus
arm_3R 2215733..2215846 2930..3043 100 <- Minus
arm_3R 2215924..2216028 2825..2929 100 <- Minus
arm_3R 2216111..2216231 2704..2824 100 <- Minus
arm_3R 2216310..2216815 2198..2703 100 <- Minus
arm_3R 2216883..2216947 2133..2197 100 <- Minus
arm_3R 2217027..2218464 695..2132 99 <- Minus
arm_3R 2231100..2231613 1..514 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:03:24 Download gff for RE27685.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6129993..6130516 3220..3743 100 <- Minus
3R 6130589..6130764 3044..3219 100 <- Minus
3R 6130842..6130955 2930..3043 100 <- Minus
3R 6131033..6131137 2825..2929 100 <- Minus
3R 6131220..6131340 2704..2824 100 <- Minus
3R 6131419..6131924 2198..2703 100 <- Minus
3R 6131992..6132056 2133..2197 100 <- Minus
3R 6132136..6133573 695..2132 99 <- Minus
3R 6134563..6134742 515..694 100 <- Minus
3R 6146209..6146722 1..514 99   Minus

RE27685.pep Sequence

Translation from 1429 to 3345

> RE27685.pep
MRHNSPVSRERASEAAAATQTAAATAGGATAHSAGGTAGGSAAATTTAGG
ATSGSGTASANTNSNSSASSSTVAAAQAAVYSGGNTVTGSLGSAGVVARG
FRSHSPTHRRRSRERQRRTHGSDQGGLLAYSGLVGVNDMTDFLGPQQGGG
GGGGGGGGGGGGGGSAGTGSGLEDSRLSGNEDYYSSFVSDEFDSSKKVHR
RCHERSSSVQAIDRLNTKIQCTKESIRQEQTARDDNVNEYLKLAASADKQ
QLQRIKAVFEKKNQKSAHNISQLQKKLDNYTKRAKDLQNHQFQTKSQHRQ
PREVLRDVGQGLRNVGGNIRDGITGFSGSVMSKPREFAHLIKNKFGSADN
INQMSEAELQGMQSANADVLGSERLQQVPGAGTSTGSGGGGQNNNTGGAG
SGTGKFNSDNGSECSSVTSESIPGGSGKSQSGASQYHIVLKTLLTELAER
KAENEKLKERIERLETGQKEFNNLTATLESERYRAEGLEEQINDLTELHQ
NEIENLKQTIADMEEKVQYQSDERLRDVNEVLENCQTRISKMEHMSQQQY
VTVEGIDNSNARALVVKLINVVLTILQVVLLLVATAAGIIMPFLKTRVRV
LTTFLSICFVIFVIRQWPDVQDIGSGLVRHLKQSLVVK*

RE27685.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:21:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16655-PA 646 GF16655-PA 1..646 1..638 2553 89.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:21:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10466-PA 625 GG10466-PA 1..625 1..638 3227 96.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:21:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18085-PA 668 GH18085-PA 113..668 83..638 2388 90.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmtn-PE 638 CG1021-PE 1..638 1..638 3215 100 Plus
Dmtn-PD 638 CG1021-PD 1..638 1..638 3215 100 Plus
Dmtn-PF 638 CG1021-PF 1..638 1..638 3215 100 Plus
Dmtn-PH 679 CG1021-PH 43..679 2..638 3180 99.2 Plus
Dmtn-PG 500 CG1021-PG 1..500 139..638 2535 100 Plus
Hr4-PC 1518 CG43934-PC 96..284 4..191 161 30.3 Plus
Hr4-PD 1529 CG43934-PD 106..294 4..191 161 30.3 Plus
Hr4-PF 1611 CG43934-PF 189..377 4..191 161 30.3 Plus
Hr4-PE 1842 CG43934-PE 420..608 4..191 161 30.3 Plus
Hr4-PK 1843 CG43934-PK 420..608 4..191 161 30.3 Plus
Hr4-PJ 1843 CG43934-PJ 420..608 4..191 161 30.3 Plus
Hr4-PH 1863 CG43934-PH 96..284 4..191 161 30.3 Plus
Hr4-PG 1986 CG43934-PG 563..751 4..191 161 30.3 Plus
Hr4-PI 2123 CG43934-PI 96..284 4..191 161 30.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:21:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24584-PA 629 GI24584-PA 1..629 1..638 2354 82.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:21:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22064-PA 471 GL22064-PA 92..467 81..460 1328 80.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:21:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10158-PB 680 GA10158-PB 128..680 81..638 2350 90.9 Plus
Dpse\GA10158-PA 642 GA10158-PA 90..642 81..638 2347 90.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:21:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10555-PA 630 GM10555-PA 1..630 1..638 3284 98.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:21:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19546-PA 631 GD19546-PA 1..631 1..638 3295 98.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:21:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22651-PA 640 GJ22651-PA 90..640 81..638 2314 88.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:21:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14490-PA 652 GK14490-PA 1..652 1..638 2310 82.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:21:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24100-PA 672 GE24100-PA 44..672 2..638 3198 95.9 Plus

RE27685.hyp Sequence

Translation from 1429 to 3345

> RE27685.hyp
MRHNSPVSRERASEAAAATQTAAATAGGATAHSAGGTAGGSAAATTTAGG
ATSGSGTASANTNSNSSASSSTVAAAQAAVYSGGNTVTGSLGSAGVVARG
FRSHSPTHRRRSRERQRRTHGSDQGGLLAYSGLVGVNDMTDFLGPQQGGG
GGGGGGGGGGGGGGSAGTGSGLEDSRLSGNEDYYSSFVSDEFDSSKKVHR
RCHERSSSVQAIDRLNTKIQCTKESIRQEQTARDDNVNEYLKLAASADKQ
QLQRIKAVFEKKNQKSAHNISQLQKKLDNYTKRAKDLQNHQFQTKSQHRQ
PREVLRDVGQGLRNVGGNIRDGITGFSGSVMSKPREFAHLIKNKFGSADN
INQMSEAELQGMQSANADVLGSERLQQVPGAGTSTGSGGGGQNNNTGGAG
SGTGKFNSDNGSECSSVTSESIPGGSGKSQSGASQYHIVLKTLLTELAER
KAENEKLKERIERLETGQKEFNNLTATLESERYRAEGLEEQINDLTELHQ
NEIENLKQTIADMEEKVQYQSDERLRDVNEVLENCQTRISKMEHMSQQQY
VTVEGIDNSNARALVVKLINVVLTILQVVLLLVATAAGIIMPFLKTRVRV
LTTFLSICFVIFVIRQWPDVQDIGSGLVRHLKQSLVVK*

RE27685.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:33:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmtn-PE 638 CG1021-PE 1..638 1..638 3215 100 Plus
Dmtn-PD 638 CG1021-PD 1..638 1..638 3215 100 Plus
Dmtn-PF 638 CG1021-PF 1..638 1..638 3215 100 Plus
Dmtn-PH 679 CG1021-PH 43..679 2..638 3180 99.2 Plus
Dmtn-PG 500 CG1021-PG 1..500 139..638 2535 100 Plus