Clone RE28171 Report

Search the DGRC for RE28171

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:281
Well:71
Vector:pFlc-1
Associated Gene/TranscriptCG45065-RA
Protein status:RE28171.pep: gold
Preliminary Size:2598
Sequenced Size:3380

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9517 2002-01-01 Sim4 clustering to Release 2
CG9517 2002-06-13 Blastp of sequenced clone
CG9517 2003-01-01 Sim4 clustering to Release 3
CG9517 2008-04-29 Release 5.5 accounting
CG9517 2008-08-15 Release 5.9 accounting
CG9517 2008-12-18 5.12 accounting

Clone Sequence Records

RE28171.complete Sequence

3380 bp (3380 high quality bases) assembled on 2002-06-13

GenBank Submission: AY122229

> RE28171.complete
ATTGGACAAGACGAGCTCGTGGCGTGCGTTTCGCAGTGAGCGGCAAAATA
TATATCTCAAATATATGAACATATATAAAAGATATCGGTAGTGAAACAAA
ATCGCCGTGGACAATTATCACTTGAAGAAGAAATAACAGTGCAATAAATC
GTACTTTGTCCCTTATTTTTTGTTTGTTAATATTTTTTTTTTTTTGCATT
ATCTGTTGCCGTTTTGAAAGATGAAAGACGGCAACAGCAGTCATGGTAAT
CGTGAGTGAGACAAAGGAAAGTGGCAGGCAGTCGCGTTCAGTTTGAAGCC
GCCACACCACAGAAAAAAAATATAAATAAATAATCCGTACTAACTTCGGA
GCAAAAGCAGCTACTGGAAAACCAAAGCAGCGACCACAAAAATAACAACC
AAAAAACCAGAGTTCTGTTCATATTTCTGTCAAAATATGGGCCAAGAGAT
ATCGCAACAGCAAAATCAGCAACACCAACAACACCAGCAGCACCAACAAC
AACAACTACCCCACCACAAACGACAACCACAGCGAAAAAGCTTCAGCGGC
ATTAGCACCACCAATCAGCCGATTTACACGCCCACAAGTCACCTATCCAC
CAGCTCCTCCTCCATCAACACCAACGATTATAGCCACAATAATACCAGCA
ATAATAATAATAATAATCAGAACTACCGATTGCGTCACAAGTACAACTTG
AGCAAGCAAACCTACGAAAGGAGCAAAATAGCAGCGAGTTCAGCGAGTAC
AAGTCAATCCGATACGGATTCGCATTACGCCAAACTAAACCTACAGAGGA
GCAGTTCGCAGAGTTCGGATAGCGGCATCTATAACTCCTCCTGTCACTGC
AGTTCCATATCCTCGATATCGGCCGTCAGCAGCAGTGCGAGCAGCAGTCG
CAGCAGCAGCAGCTCTAGTCGCGGTTGTCCCAGTTCTGTGGTGTCCAGCA
AATCGAACCGCTCGTTGGACAAACAGAAACACTATCTAAGCCATCACCTG
TACATCAAGTCCTATCTGGACATCTTGGAGGAGGACGAGCGGGCACGGGC
ACACTTCAAATCCGCTCGTCCGGGCGGCATTCGCAACTATACACCCAAGA
TCTTGGCCAGCGGAGAATCGAGCTTATCGGGCAACTCCAGCACCAACACA
GCTCTATCATCCAGTGCTCCAGCTCATTGCTACGGCCCGGGAAAGAGAAC
AACAGTCGGCGGAACAAGCGGATCAGGTGGAGCAGCAGGAGCAACAGGAA
CAGGAGCACAGGGAACGGATCCGTGGATTTGACAATTACTGAAACATGGC
GTTTGGAACAATGACGTCTTTGCTTGGCATGATCCCGCTGCTGGCGATCG
GCATGAATTTCTATCGCTATCAAAGCGTAGATCCCGAGAACAAGGTCCAG
GAGCCAACCGTCATACGTCGTCAGTATGATTTCGTGGTGATTGGCGGCGG
ATCCGCTGGAGCTGTGGTGGCGAATCGCCTGAGTGAGGTGCGCAACTGGA
CCGTTCTGCTACTCGAAGCCGGCGGTGATGAAACGGAGATCTCGGACGTG
CCAGCTCTGGCGGGCTATCTGCAGCTTACGGAGTTGGACTGGAAGTACCA
GACTACGCCTTCATCCACCCGCCAGTATTGTCAGGCGATGAAGGGCGATC
GCTGCTTTTGGCCAAGAGGAAAAGTCTTGGGCGGAAGTTCTGTTTTAAAT
GCTATGGTCTATGTTCGTGGCTCCAAGAACGACTATAATCATTGGGCATC
GTTGGGTAATCCGGGTTGGGACTACGACAGCATGCTCAAATACTTCCTGA
AATCGGAAGACGTACGAAATCCCTATTTGGCCAAGACGCCATACCATGAA
ACAGGTGGATACCTGACGGTTCAGGAGGCTCCATGGCGTACACCACTCTC
GATAGCCTTCCTCCAAGCGGGCATTGAGATGGGCTATGAGAACCGGGACA
TTAATGGAGCCCAACAGACGGGCTTCATGCTTACGCAAAGCACAATTCGC
CGCGGTGCTAGATGCTCCACGGGCAAGGCCTTCATTCGTCCAGTTCGACA
GCGTAAGAATTTCGATGTCCTGCTCCATGCGGAGGCCACAAGGATCCTGT
TCGATAAGCAGAAGCGAGCCATTGGTGTGGAATACATGAGGGGTGGCCGC
AAGAATGTGGTTTTCGTGAGAAGAGAAGTGATAGCCAGTGCTGGAGCTCT
GAATACTCCCAAATTACTGATGCTTTCCGGAGTTGGTCCCGCTGAGCATC
TGCAGGAGCACAATATCCCTGTTATTTCGGATCTCCCAGTGGGCAACAAT
ATGCAGGATCATGTGGGTCTGGGTGGACTCACCTTCGTGGTGGACGCTCC
ACTGACTGTCACCCGCAATCGTTTCCAAACCATTCCAGTTTCCATGGAAT
ATATACTAAGGGAACGGGGTCCGATGACATTTTCGGGCGTAGAAGGTGTC
GCCTTTCTAAACACCAAGTACCAAGATCCCTCGGTAGACTGGCCCGATGT
CCAATTTCATTTTTGTCCCAGTTCCATTAACTCCGATGGTGGCGAGCAGA
TAAGAAAGATACTGAATCTACGAGATGGTTTCTACAACACAGTGTACAAA
CCACTGCAGCACAGTGAAACCTGGTCGATTTTGCCCCTGTTGCTGAGACC
CAAGAGCACGGGATGGGTGCGCTTGAATTCGAGGAATCCGCAGCATCAGC
CCAAGATCATACCAAACTATTTTGCCCACCAGGAGGACATCGATGTGCTG
GTCGAGGGCATCAAGTTGGCTATCAATGTCTCGAATACCCAGGCATTTCA
GCGTTTCGGCTCCAGATTGCATAATATTCCGCTGCCAGGCTGTAGACATT
TGCCATTCCAGTCGAATGAATATTGGGCATGTTGCATCAAGGAGTTTACG
TTCACCATCTATCATCCCGCCGGCACATGTCGCATGGGACCCAGCTGGGA
TGTTACGGCCGTGGTGGATCCGAGATTACGGGTCTATGGCGTATCCGGAG
TTCGAGTGGTGGACGCCAGCATTATGCCAACGATCGTGAATGGGAATCCC
AATGCTCCGGTCATCGCGATTGGCGAAAAGGCCTCCGATTTGATCAAAGA
AGATTGGGGCGTCAGGCGGGCGCACACTTCCGCTTAGTTAAGAAGTTGTC
TATCGCTAATTTATGTTTCAACTAGTCAAATGTGGATTAACTGATGTAAT
ATTATCGCTATGTGTTTTTGTTTTATCAAATTCCTCGTTTTGTTCACCGT
TAAATTTATGCTTAGTTATTTGGATAAGTTTAGTGTACAAAGTCCCACAA
AACTGTTTTTTTTTTATTACTTTATCAAGCATTTTATTAAATATTTATGT
ACCTATTTAAAAAAGAAAAAAAAAAAAAAA

RE28171.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:46:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG9517-RB 3358 CG9517-RB 1..3358 1..3358 16775 99.9 Plus
CG9517-RA 3255 CG9517-RA 1273..3255 1376..3358 9915 100 Plus
CG9517-RA 3255 CG9517-RA 1..1272 1..1272 6345 99.9 Plus
CG9518-RA 3673 CG9518-RA 833..983 1423..1573 215 76.1 Plus
CG9518-RA 3673 CG9518-RA 1334..1433 1930..2029 185 79 Plus
CG9518-RA 3673 CG9518-RA 2425..2517 3015..3107 165 78.4 Plus
CG9518-RA 3673 CG9518-RA 1687..1739 2280..2332 160 86.7 Plus
CG9518-RA 3673 CG9518-RA 1052..1125 1648..1721 145 79.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:43:20
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 14765619..14767565 3359..1413 9705 99.9 Minus
chrX 22417052 chrX 14767795..14768796 1412..411 4950 99.6 Minus
chrX 22417052 chrX 14772433..14772837 406..1 1965 99.5 Minus
chrX 22417052 chrX 14755470..14756070 2029..1423 285 70.2 Minus
chrX 22417052 chrX 14754386..14754559 3107..2934 195 74.1 Minus
chrX 22417052 chrX 14811467..14811633 1603..1437 190 74.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:46:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:43:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14875359..14877315 3369..1413 9740 99.8 Minus
X 23542271 X 14877545..14878546 1412..411 5010 100 Minus
X 23542271 X 14882174..14882585 412..1 2045 99.8 Minus
X 23542271 X 14865229..14865610 2029..1648 245 70.9 Minus
X 23542271 X 14864145..14864318 3107..2934 195 74.1 Minus
X 23542271 X 14921251..14921417 1603..1437 190 74.3 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:19:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 14883457..14885413 3369..1413 9740 99.8 Minus
X 23527363 X 14885643..14886644 1412..411 5010 100 Minus
X 23527363 X 14890272..14890683 412..1 2045 99.7 Minus
X 23527363 X 14873777..14873927 1573..1423 215 76.1 Minus
X 23527363 X 14873327..14873426 2029..1930 185 79 Minus
X 23527363 X 14873021..14873073 2332..2280 160 86.7 Minus
X 23527363 X 14873635..14873708 1721..1648 145 79.7 Minus
Blast to na_te.dros performed 2019-03-16 07:43:19
Subject Length Description Subject Range Query Range Score Percent Strand
invader4 3105 invader4 INVADER4 3105bp 1338..1443 3343..3237 135 62 Minus
Dbif\P-element_O 2986 Dbif\P-element_O P_O 2986bp Derived from X71634. 2697..2797 3350..3249 128 62.1 Minus

RE28171.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:44:11 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 14765611..14767565 1413..3365 99 <- Minus
chrX 14767795..14768700 507..1412 90 == Minus
chrX 14768753..14768794 413..454 100 <- Minus
chrX 14772424..14772837 1..412 93   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:06:50 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
CG9517-RB 1..1842 1296..3137 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:21:10 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
CG9517-RB 1..1842 1296..3137 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:25:14 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
CG9517-RB 1..1842 1296..3137 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:12:02 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
CG9517-RB 1..1842 1296..3137 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:40:18 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
CG45065-RA 1..1842 1296..3137 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:47:12 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
CG9517-RB 1..3362 1..3358 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:21:10 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
CG9517-RB 1..3358 1..3358 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:25:14 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
CG9517-RB 1..3358 1..3358 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:12:02 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
CG9517-RB 1..3368 1..3365 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:40:18 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
CG45064-RA 2..3359 1..3358 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:44:11 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
X 14875361..14877315 1413..3365 99 <- Minus
X 14877545..14878544 413..1412 100 <- Minus
X 14882174..14882585 1..412 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:44:11 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
X 14875361..14877315 1413..3365 99 <- Minus
X 14877545..14878544 413..1412 100 <- Minus
X 14882174..14882585 1..412 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:44:11 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
X 14875361..14877315 1413..3365 99 <- Minus
X 14877545..14878544 413..1412 100 <- Minus
X 14882174..14882585 1..412 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:25:14 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14769394..14771348 1413..3365 99 <- Minus
arm_X 14771578..14772577 413..1412 100 <- Minus
arm_X 14776207..14776618 1..412 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:44:38 Download gff for RE28171.complete
Subject Subject Range Query Range Percent Splice Strand
X 14883459..14885413 1413..3365 99 <- Minus
X 14885643..14886642 413..1412 100 <- Minus
X 14890272..14890683 1..412 99   Minus

RE28171.pep Sequence

Translation from 1295 to 3136

> RE28171.pep
MAFGTMTSLLGMIPLLAIGMNFYRYQSVDPENKVQEPTVIRRQYDFVVIG
GGSAGAVVANRLSEVRNWTVLLLEAGGDETEISDVPALAGYLQLTELDWK
YQTTPSSTRQYCQAMKGDRCFWPRGKVLGGSSVLNAMVYVRGSKNDYNHW
ASLGNPGWDYDSMLKYFLKSEDVRNPYLAKTPYHETGGYLTVQEAPWRTP
LSIAFLQAGIEMGYENRDINGAQQTGFMLTQSTIRRGARCSTGKAFIRPV
RQRKNFDVLLHAEATRILFDKQKRAIGVEYMRGGRKNVVFVRREVIASAG
ALNTPKLLMLSGVGPAEHLQEHNIPVISDLPVGNNMQDHVGLGGLTFVVD
APLTVTRNRFQTIPVSMEYILRERGPMTFSGVEGVAFLNTKYQDPSVDWP
DVQFHFCPSSINSDGGEQIRKILNLRDGFYNTVYKPLQHSETWSILPLLL
RPKSTGWVRLNSRNPQHQPKIIPNYFAHQEDIDVLVEGIKLAINVSNTQA
FQRFGSRLHNIPLPGCRHLPFQSNEYWACCIKEFTFTIYHPAGTCRMGPS
WDVTAVVDPRLRVYGVSGVRVVDASIMPTIVNGNPNAPVIAIGEKASDLI
KEDWGVRRAHTSA*

RE28171.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:41:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19431-PA 612 GF19431-PA 1..612 1..612 3198 96.2 Plus
Dana\GF19422-PA 626 GF19422-PA 25..620 12..604 1847 55.4 Plus
Dana\GF19432-PA 651 GF19432-PA 16..575 3..604 1788 55.1 Plus
Dana\GF19429-PA 722 GF19429-PA 61..657 10..604 1677 51.9 Plus
Dana\GF16762-PA 616 GF16762-PA 37..610 33..607 1375 45.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:41:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19437-PA 867 GG19437-PA 282..866 28..612 3197 99.5 Plus
Dere\GG19438-PA 699 GG19438-PA 16..617 3..604 1973 58.6 Plus
Dere\GG19429-PA 626 GG19429-PA 25..620 12..604 1854 55.4 Plus
Dere\GG19436-PA 744 GG19436-PA 61..657 10..604 1658 50.9 Plus
Dere\GG11465-PA 616 GG11465-PA 36..607 32..604 1385 45.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:41:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11959-PA 623 GH11959-PA 1..609 1..609 3105 92.9 Plus
Dgri\GH11960-PA 681 GH11960-PA 16..617 3..604 1978 58.1 Plus
Dgri\GH11953-PA 626 GH11953-PA 15..620 2..604 1872 55.1 Plus
Dgri\GH11957-PA 695 GH11957-PA 61..666 10..613 1682 51.2 Plus
Dgri\GH19466-PA 615 GH19466-PA 35..609 32..607 1344 44.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:23:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG45065-PA 613 CG45065-PA 1..613 1..613 3255 100 Plus
CG9518-PC 703 CG9518-PC 16..617 3..604 1935 58.1 Plus
CG9518-PB 703 CG9518-PB 16..617 3..604 1935 58.1 Plus
CG9518-PA 703 CG9518-PA 16..617 3..604 1935 58.1 Plus
CG9503-PA 626 CG9503-PA 20..620 7..604 1819 55.1 Plus
CG9514-PA 726 CG9514-PA 61..657 10..604 1645 51.1 Plus
CG6142-PA 616 CG6142-PA 36..607 32..604 1368 45.6 Plus
CG12398-PA 633 CG12398-PA 23..624 12..604 1244 43.2 Plus
CG9521-PA 621 CG9521-PA 35..618 20..605 1164 42.1 Plus
Gld-PA 612 CG1152-PA 64..611 43..607 1137 42.1 Plus
Gld-PB 625 CG1152-PB 64..611 43..607 1137 42.1 Plus
CG9519-PA 622 CG9519-PA 47..618 28..603 1126 42 Plus
CG9522-PA 616 CG9522-PA 46..615 39..604 1120 41.3 Plus
CG12539-PA 626 CG12539-PA 58..623 44..604 1080 40.2 Plus
CG9512-PB 623 CG9512-PB 41..615 30..604 972 37.9 Plus
CG9512-PA 623 CG9512-PA 41..615 30..604 972 37.9 Plus
fiz-PB 646 CG9509-PB 65..625 40..604 913 38 Plus
fiz-PA 646 CG9509-PA 65..625 40..604 913 38 Plus
Eo-PA 657 CG9504-PA 90..646 44..603 684 33.2 Plus
ninaG-PA 597 CG6728-PA 47..586 44..600 528 28.8 Plus
ninaG-PB 581 CG6728-PB 47..570 44..600 467 27.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:41:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15380-PA 613 GI15380-PA 1..609 1..609 3124 93.9 Plus
Dmoj\GI15381-PA 681 GI15381-PA 16..617 3..604 1974 58.1 Plus
Dmoj\GI15372-PA 626 GI15372-PA 15..620 2..604 1874 55.4 Plus
Dmoj\GI15378-PA 695 GI15378-PA 61..657 10..604 1670 51.6 Plus
Dmoj\GI24701-PA 614 GI24701-PA 35..609 32..607 1378 45.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:41:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27088-PA 674 GL27088-PA 19..615 10..604 1665 50.9 Plus
Dper\GL27089-PA 608 GL27089-PA 296..593 311..608 1626 97.7 Plus
Dper\GL27090-PA 551 GL27090-PA 16..535 3..555 1602 52.8 Plus
Dper\GL21830-PA 614 GL21830-PA 39..612 33..607 1369 44.9 Plus
Dper\GL27095-PA 629 GL27095-PA 62..628 44..604 1163 41.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22681-PA 623 GA22681-PA 1..608 1..608 3215 97.7 Plus
Dpse\GA21849-PA 691 GA21849-PA 16..617 3..604 1973 58.3 Plus
Dpse\GA21838-PA 626 GA21838-PA 25..620 12..604 1844 54.8 Plus
Dpse\GA21847-PA 712 GA21847-PA 57..653 10..604 1670 51.1 Plus
Dpse\GA19386-PA 614 GA19386-PA 39..612 33..607 1361 44.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12026-PA 536 GM12026-PA 7..536 84..613 2853 99.1 Plus
Dsec\GM12016-PA 626 GM12016-PA 15..620 2..604 1848 54.6 Plus
Dsec\GM12023-PA 726 GM12023-PA 61..657 10..604 1664 51.1 Plus
Dsec\GM12018-PA 633 GM12018-PA 23..624 12..604 1225 42.9 Plus
Dsec\GM12030-PA 621 GM12030-PA 35..618 20..605 1178 41.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15832-PA 864 GD15832-PA 279..863 28..612 3189 99.3 Plus
Dsim\GD15509-PA 505 GD15509-PA 1..492 115..604 1630 58.7 Plus
Dsim\GD21272-PA 616 GD21272-PA 36..607 32..604 1396 45.6 Plus
Dsim\GD22252-PA 633 GD22252-PA 23..624 12..604 1249 42.9 Plus
Dsim\GD15511-PA 621 GD15511-PA 35..618 20..605 1181 41.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16802-PA 862 GJ16802-PA 278..859 28..609 2990 93.5 Plus
Dvir\GJ16803-PA 666 GJ16803-PA 16..617 3..604 1972 58.4 Plus
Dvir\GJ16796-PA 626 GJ16796-PA 15..620 2..604 1875 55.4 Plus
Dvir\GJ16801-PA 694 GJ16801-PA 61..657 10..604 1670 51.4 Plus
Dvir\GJ23917-PA 615 GJ23917-PA 35..609 32..607 1349 44.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19743-PA 885 GK19743-PA 264..846 27..608 3020 95.7 Plus
Dwil\GK19744-PA 658 GK19744-PA 16..632 3..613 1965 56.9 Plus
Dwil\GK19736-PA 626 GK19736-PA 15..620 2..604 1871 55.6 Plus
Dwil\GK19742-PA 701 GK19742-PA 61..657 10..604 1670 51.3 Plus
Dwil\GK12793-PA 617 GK12793-PA 37..610 32..607 1376 45.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16090-PA 870 GE16090-PA 285..869 28..612 3191 99.3 Plus
Dyak\GE16091-PA 706 GE16091-PA 16..617 3..604 1976 58.4 Plus
Dyak\GE16081-PA 626 GE16081-PA 25..620 12..604 1852 55.2 Plus
Dyak\GE16089-PA 730 GE16089-PA 61..657 10..604 1671 51.8 Plus
Dyak\GE23657-PA 616 GE23657-PA 36..607 32..604 1405 45.9 Plus

RE28171.hyp Sequence

Translation from 1295 to 3136

> RE28171.hyp
MAFGTMTSLLGMIPLLAIGMNFYRYQSVDPENKVQEPTVIRRQYDFVVIG
GGSAGAVVANRLSEVRNWTVLLLEAGGDETEISDVPALAGYLQLTELDWK
YQTTPSSTRQYCQAMKGDRCFWPRGKVLGGSSVLNAMVYVRGSKNDYNHW
ASLGNPGWDYDSMLKYFLKSEDVRNPYLAKTPYHETGGYLTVQEAPWRTP
LSIAFLQAGIEMGYENRDINGAQQTGFMLTQSTIRRGARCSTGKAFIRPV
RQRKNFDVLLHAEATRILFDKQKRAIGVEYMRGGRKNVVFVRREVIASAG
ALNTPKLLMLSGVGPAEHLQEHNIPVISDLPVGNNMQDHVGLGGLTFVVD
APLTVTRNRFQTIPVSMEYILRERGPMTFSGVEGVAFLNTKYQDPSVDWP
DVQFHFCPSSINSDGGEQIRKILNLRDGFYNTVYKPLQHSETWSILPLLL
RPKSTGWVRLNSRNPQHQPKIIPNYFAHQEDIDVLVEGIKLAINVSNTQA
FQRFGSRLHNIPLPGCRHLPFQSNEYWACCIKEFTFTIYHPAGTCRMGPS
WDVTAVVDPRLRVYGVSGVRVVDASIMPTIVNGNPNAPVIAIGEKASDLI
KEDWGVRRAHTSA*

RE28171.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:40:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG45065-PA 613 CG45065-PA 1..613 1..613 3255 100 Plus
CG9518-PC 703 CG9518-PC 16..617 3..604 1935 58.1 Plus
CG9518-PB 703 CG9518-PB 16..617 3..604 1935 58.1 Plus
CG9518-PA 703 CG9518-PA 16..617 3..604 1935 58.1 Plus
CG9503-PA 626 CG9503-PA 20..620 7..604 1819 55.1 Plus