Clone RE28322 Report

Search the DGRC for RE28322

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:283
Well:22
Vector:pFlc-1
Associated Gene/TranscriptCG9416-RA
Protein status:RE28322.pep: gold
Preliminary Size:2758
Sequenced Size:3091

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9416 2002-01-01 Sim4 clustering to Release 2
CG9416 2003-01-01 Sim4 clustering to Release 3
CG9416 2003-07-07 Blastp of sequenced clone
CG9416 2008-04-29 Release 5.5 accounting
CG9416 2008-08-15 Release 5.9 accounting
CG9416 2008-12-18 5.12 accounting

Clone Sequence Records

RE28322.complete Sequence

3091 bp (3091 high quality bases) assembled on 2003-07-07

GenBank Submission: AY118383

> RE28322.complete
AGTGCAGCAGCCGCAGCCGCAGACGAACGCCAACCGTCGAAGGGGACAGT
CGTACTCCCCGCCACCAATCAGCTGATCCTCAGCGGCCAAGAAGCGAGCG
CTTTTCCAATCGGACTCGCTTTCATCTCGCCCACTAGTTTCAGTTTATTT
TCGGTCATACATATGTGCTAATAAGACGCCGCGAGTGCCAACTAATTGTG
ACGGCAATTCTACAGTGCAAGTAATCGAAAGATTCTTGCAGCGGGCCAAA
AGGCCACAATGAAATCAAAGTACGAAAACATGAAGATCATCTACAATCGC
AGCAAGATCGGCTGGTACTGGGCTCCGTTGTTCGTATCATGCTGGTTTCT
GCTCTTCTATCTGGTGGTAATACCCAGCTTCCATCGCATGCCGCAGCTAA
AGACGCTCGAGGATGAGCGCCAGCAGCCGGGTCAGTTCATCGGGGAGCGG
GCGGAGAACACCCTTCTGAGGCTTTCCAAGATTGGACCCAAGGTCGTGGG
CAGTGCGGCCAACGAACAGGTGGCTGTTCAGTTTCTTCTCAGCGAGATAG
GTGACATCATCGACGATGCTCGAACGGATCTCTACGATATCGAGAAGGAT
GTTCAGGTTGCCTCCGGTAACTATCTTCTCTGGTCCATGGTCAATGTCTA
TCAGAGCATTCAGAATGTGGTGGTCAAGCTATCGCCGAAGAATGCAACCA
GTGAAGCTGCTCTTTTGATCAATTCCCACTTCGATTCGGTGCCGGGAAGC
TCGGGTGCCGGAGACGCCGGAATGATGTGCGTGATTATGTTGGAAGTTCT
CCGGGTTATCACGAAATACGAGACCCCACTAACCTACTCGGTTGTATTCC
TCTTCAACGGAGCCGAGGAGAATCCACTGCAGGGCAGCCATGCATTCATC
ACCCAACATCCTTGGGCCCAAAACATTAGAGCGGTCATTAATTTGGACTC
GGCTGGCAGTGGAGGACGAGAAATTCTATTTCAATCCGGACCCGATCATC
CTTGGCTCATGAAGTACTATGGCAAAAACATAGTTCATCCGTTTGCCTCC
ACTATCGGTGAGGAATTGTTCCAAAATGGCTTTGTTCCCTCAGAGACCGA
TTATCGCGTGTTCCGTGACTACGGCCATATACCCGGTCTCGATATGGCAC
AGACTTTGAATGGCTATGTATACCATACCAAATATGATCGCTTTAATCTC
ATCCCGCGGCGAACTTACCAATTGACTGGTGAAAATATTTTGGCTCTGGT
CAAGGCCCTGGCCAACGCAGAAGAACTGGAGAATCCATCGAAATACGCCG
AGGGACACATGATATTCTTCGACATGATGGGCTGGTTCTTTGTCTATTAT
CCGGAGACCACGGGCATTATCATCAACATTACCGTGTGTGTCCTGGTCTG
CGTCACCATCGTATTGTACATCTGGATGATGTCCAGCAGTACGGGCATGT
TCCGACGACGAATCTGGGCAAAGTTTGGCATTCTGGCCGCTCTCCAGTTG
GCTGGAGTTGCTCTGGGCATTGGTCTGGTCATATCGATAGCCCTGTTCCT
GGACGCGGTGAATCTACCGATGTCCTGGTTTTCGCAAAACTGGATGCTCT
TCGGCTTGTACTTCTGCCCCATGATTTTTGGTATGGGCATTGTGCCAGCT
ATTTACTTTAGTCGCACTAAAGAGCATGGTTTACCCCTGGGCTATGGCAT
TCAACTATTGATGCATTCGCATTGCCTGATCTTGACCATTATCACCGCCA
TAATGGTGAGCTATAGTATTCGTTCCGCCTTTGTCATAATGCTCTGCATC
GGCTTCTACACTCTGTCCGTGCTGATCAATTTGGTAACTAAGGCACACAA
AACAAATTTCCTGTGGCTCATACCGCACTGCATTTGCCAGGTGCTGCCAT
TCATGTTCTATACTTACTGCTGCTATGCCTTCTATGTGGTTTTTGTGCCC
ATGCAGGGACGCGAGTGTAATACAAATCCGGAGATTCTAATGGGTTTCTT
TACGGCGCTAATGGTTCTACTATTTGCACCCTTTCTGGTGCCCTTGTTCT
GTCTGTTCCGCAAGTCCAAGACAATTATCTCAATGTTTGGCATCTGCACG
ATAGTGTTTATCATATTTGCCGCAACACCGATTGCCTTTCCTTACGCCGA
GAAGACGGCGCCCCAAAGATTCTTCGCTGTGCACACAGCAAGAACCTTCC
ACAATGGCGATCCAGCGAGCACAGTGAGTCATAAGGACTCGGGATACTTT
GTCCTTCCGGTCGATCGACGTCCTCACACCGTGGATGATATTCTCTTTGA
AAACACAAACTTTACAAAGTCAGAACGTATTGATTGTGACTCGGAGCTCA
TGTGCGGATTTCCCATTTACAGCTCACGCTGGTTAAATGCAGTTGATAAC
AGCTATTTTGTTCCTGGTCCCGAGCCAAATAGGGAATATATTCCCACTCT
GACTATTTTGGAAAAATCGAGTAATTCAGATACAAATATTAGGTTTGATC
TTGAGATCTCAGGACCGGATCACACGAGCATATTCATTCTGCCCTTAAAC
GATAGCAAATTGGTGGATTGGTCCTTCATTAGGGATCCGCTGGATGGAAA
TGTAAAGCCACCATACTACGTGTACTGGTCATATGCATTAGATCCCAAAC
CCTTGCAGTTTTCACTGGAATTCGAGCACGAAGATCCAAATTGGTCGGGA
GGCACTTTCAAAATAGCCCTAATGGGTCATCGAATACACGATGACATGTA
TATTACGGAGGATTTCCGTGAGTTCCTGGCCACGTTTCCGCCGTGGGCGC
ATGTTAGCTCCTGGCTGGGATCCTACAATAGTTGGCAGCTTTAAGTGTAG
ACTCAAAGTTCCTTCACGAACTCAACTCAATCCCATTTTTGCCATGACAC
CTCAGCTACTCTTAATTCTGGTACTGTTGATGGAGTGTACCAATTTTACC
TAATCCAACGAACAAAGTGTCGATAAGCATGGCACGTCCTAAATTGTATT
AGTATTTACGATTAGAACACTGTAGTTACTACTTTGTAATTTTATTAAAA
TATACTATAAATTATTTATTAAGATAAAAAAAAAAAAAAAA

RE28322.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:39:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG9416-RA 3198 CG9416-RA 117..3192 1..3076 15365 99.9 Plus
CG11961-RA 3065 CG11961-RA 615..697 584..666 235 85.5 Plus
CG11961-RB 3091 CG11961-RB 671..753 584..666 235 85.5 Plus
CG11961-RA 3065 CG11961-RA 875..936 844..905 145 82.2 Plus
CG11961-RB 3091 CG11961-RB 931..992 844..905 145 82.2 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:00:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 15257093..15257771 929..251 3305 99.1 Minus
chr2R 21145070 chr2R 15254398..15254802 3075..2671 2010 99.8 Minus
chr2R 21145070 chr2R 15256105..15256489 1674..1290 1910 99.7 Minus
chr2R 21145070 chr2R 15255472..15255797 2181..1856 1630 100 Minus
chr2R 21145070 chr2R 15254858..15255140 2676..2394 1385 99.3 Minus
chr2R 21145070 chr2R 15260139..15260391 253..1 1190 98 Minus
chr2R 21145070 chr2R 15255198..15255410 2393..2181 1065 100 Minus
chr2R 21145070 chr2R 15255861..15256043 1855..1673 915 100 Minus
chr2R 21145070 chr2R 15256554..15256709 1290..1135 765 99.4 Minus
chr2R 21145070 chr2R 15256764..15256889 1137..1012 630 100 Minus
chr2R 21145070 chr2R 15256948..15257036 1014..926 445 100 Minus
chr2R 21145070 chr2R 15246638..15246720 584..666 235 85.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:46:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:00:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19369944..19370622 929..251 3395 100 Minus
2R 25286936 2R 19367247..19367652 3076..2671 2015 99.8 Minus
2R 25286936 2R 19368955..19369339 1674..1290 1925 100 Minus
2R 25286936 2R 19368322..19368647 2181..1856 1630 100 Minus
2R 25286936 2R 19367708..19367990 2676..2394 1415 100 Minus
2R 25286936 2R 19372990..19373242 253..1 1250 99.6 Minus
2R 25286936 2R 19368048..19368260 2393..2181 1065 100 Minus
2R 25286936 2R 19368711..19368893 1855..1673 915 100 Minus
2R 25286936 2R 19369404..19369559 1290..1135 780 100 Minus
2R 25286936 2R 19369614..19369739 1137..1012 630 100 Minus
2R 25286936 2R 19369798..19369886 1014..926 445 100 Minus
2R 25286936 2R 19359499..19359581 584..666 235 85.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:01:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 19371143..19371821 929..251 3395 100 Minus
2R 25260384 2R 19368446..19368851 3076..2671 2015 99.7 Minus
2R 25260384 2R 19370154..19370538 1674..1290 1925 100 Minus
2R 25260384 2R 19369521..19369846 2181..1856 1630 100 Minus
2R 25260384 2R 19368907..19369189 2676..2394 1415 100 Minus
2R 25260384 2R 19374189..19374441 253..1 1250 99.6 Minus
2R 25260384 2R 19369247..19369459 2393..2181 1065 100 Minus
2R 25260384 2R 19369910..19370092 1855..1673 915 100 Minus
2R 25260384 2R 19370603..19370758 1290..1135 780 100 Minus
2R 25260384 2R 19370813..19370938 1137..1012 630 100 Minus
2R 25260384 2R 19370997..19371085 1014..926 445 100 Minus
2R 25260384 2R 19360698..19360780 584..666 235 85.5 Plus
2R 25260384 2R 19360958..19361019 844..905 145 82.2 Plus
Blast to na_te.dros performed on 2019-03-16 19:00:07 has no hits.

RE28322.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:00:48 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 15255198..15255409 2182..2393 100 <- Minus
chr2R 15254438..15254796 2677..3035 100 <- Minus
chr2R 15254858..15255140 2394..2676 99 <- Minus
chr2R 15255472..15255797 1856..2181 100 <- Minus
chr2R 15255861..15256041 1675..1855 100 <- Minus
chr2R 15256105..15256488 1291..1674 99 <- Minus
chr2R 15256554..15256708 1136..1290 99 <- Minus
chr2R 15256766..15256886 1015..1135 100 <- Minus
chr2R 15256948..15257032 930..1014 100 <- Minus
chr2R 15257093..15257769 253..929 99 <- Minus
chr2R 15260140..15260391 1..252 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:07:07 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
CG9416-RA 1..2586 259..2844 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:31:49 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
CG9416-RA 1..2586 259..2844 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:21:47 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
CG9416-RA 1..2586 259..2844 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:05:33 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
CG9416-RA 1..2586 259..2844 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:58:18 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
CG9416-RA 1..2586 259..2844 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:33:15 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
CG9416-RA 1..3075 1..3075 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:31:49 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
CG9416-RA 1..3075 1..3075 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:21:47 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
CG9416-RA 2..3076 1..3075 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:05:33 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
CG9416-RA 1..3075 1..3075 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:58:18 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
CG9416-RA 2..3076 1..3075 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:00:48 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19367708..19367990 2394..2676 100 <- Minus
2R 19368048..19368259 2182..2393 100 <- Minus
2R 19368322..19368647 1856..2181 100 <- Minus
2R 19368711..19368891 1675..1855 100 <- Minus
2R 19367248..19367646 2677..3075 100 <- Minus
2R 19368955..19369338 1291..1674 100 <- Minus
2R 19369404..19369558 1136..1290 100 <- Minus
2R 19369616..19369736 1015..1135 100 <- Minus
2R 19369798..19369882 930..1014 100 <- Minus
2R 19369944..19370620 253..929 100 <- Minus
2R 19372991..19373242 1..252 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:00:48 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19367708..19367990 2394..2676 100 <- Minus
2R 19368048..19368259 2182..2393 100 <- Minus
2R 19368322..19368647 1856..2181 100 <- Minus
2R 19368711..19368891 1675..1855 100 <- Minus
2R 19367248..19367646 2677..3075 100 <- Minus
2R 19368955..19369338 1291..1674 100 <- Minus
2R 19369404..19369558 1136..1290 100 <- Minus
2R 19369616..19369736 1015..1135 100 <- Minus
2R 19369798..19369882 930..1014 100 <- Minus
2R 19369944..19370620 253..929 100 <- Minus
2R 19372991..19373242 1..252 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:00:48 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19367708..19367990 2394..2676 100 <- Minus
2R 19368048..19368259 2182..2393 100 <- Minus
2R 19368322..19368647 1856..2181 100 <- Minus
2R 19368711..19368891 1675..1855 100 <- Minus
2R 19367248..19367646 2677..3075 100 <- Minus
2R 19368955..19369338 1291..1674 100 <- Minus
2R 19369404..19369558 1136..1290 100 <- Minus
2R 19369616..19369736 1015..1135 100 <- Minus
2R 19369798..19369882 930..1014 100 <- Minus
2R 19369944..19370620 253..929 100 <- Minus
2R 19372991..19373242 1..252 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:21:47 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15256216..15256396 1675..1855 100 <- Minus
arm_2R 15255553..15255764 2182..2393 100 <- Minus
arm_2R 15255827..15256152 1856..2181 100 <- Minus
arm_2R 15254753..15255151 2677..3075 100 <- Minus
arm_2R 15255213..15255495 2394..2676 100 <- Minus
arm_2R 15256460..15256843 1291..1674 100 <- Minus
arm_2R 15256909..15257063 1136..1290 100 <- Minus
arm_2R 15257121..15257241 1015..1135 100 <- Minus
arm_2R 15257303..15257387 930..1014 100 <- Minus
arm_2R 15257449..15258125 253..929 100 <- Minus
arm_2R 15260496..15260747 1..252 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:43:42 Download gff for RE28322.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19370603..19370757 1136..1290 100 <- Minus
2R 19370815..19370935 1015..1135 100 <- Minus
2R 19370997..19371081 930..1014 100 <- Minus
2R 19369910..19370090 1675..1855 100 <- Minus
2R 19369247..19369458 2182..2393 100 <- Minus
2R 19370154..19370537 1291..1674 100 <- Minus
2R 19368447..19368845 2677..3075 100 <- Minus
2R 19368907..19369189 2394..2676 100 <- Minus
2R 19369521..19369846 1856..2181 100 <- Minus
2R 19371143..19371819 253..929 100 <- Minus
2R 19374190..19374441 1..252 99   Minus

RE28322.pep Sequence

Translation from 258 to 2843

> RE28322.pep
MKSKYENMKIIYNRSKIGWYWAPLFVSCWFLLFYLVVIPSFHRMPQLKTL
EDERQQPGQFIGERAENTLLRLSKIGPKVVGSAANEQVAVQFLLSEIGDI
IDDARTDLYDIEKDVQVASGNYLLWSMVNVYQSIQNVVVKLSPKNATSEA
ALLINSHFDSVPGSSGAGDAGMMCVIMLEVLRVITKYETPLTYSVVFLFN
GAEENPLQGSHAFITQHPWAQNIRAVINLDSAGSGGREILFQSGPDHPWL
MKYYGKNIVHPFASTIGEELFQNGFVPSETDYRVFRDYGHIPGLDMAQTL
NGYVYHTKYDRFNLIPRRTYQLTGENILALVKALANAEELENPSKYAEGH
MIFFDMMGWFFVYYPETTGIIINITVCVLVCVTIVLYIWMMSSSTGMFRR
RIWAKFGILAALQLAGVALGIGLVISIALFLDAVNLPMSWFSQNWMLFGL
YFCPMIFGMGIVPAIYFSRTKEHGLPLGYGIQLLMHSHCLILTIITAIMV
SYSIRSAFVIMLCIGFYTLSVLINLVTKAHKTNFLWLIPHCICQVLPFMF
YTYCCYAFYVVFVPMQGRECNTNPEILMGFFTALMVLLFAPFLVPLFCLF
RKSKTIISMFGICTIVFIIFAATPIAFPYAEKTAPQRFFAVHTARTFHNG
DPASTVSHKDSGYFVLPVDRRPHTVDDILFENTNFTKSERIDCDSELMCG
FPIYSSRWLNAVDNSYFVPGPEPNREYIPTLTILEKSSNSDTNIRFDLEI
SGPDHTSIFILPLNDSKLVDWSFIRDPLDGNVKPPYYVYWSYALDPKPLQ
FSLEFEHEDPNWSGGTFKIALMGHRIHDDMYITEDFREFLATFPPWAHVS
SWLGSYNSWQL*

RE28322.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:07:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12612-PA 861 GF12612-PA 1..861 1..861 4201 88.5 Plus
Dana\GF12333-PA 862 GF12333-PA 17..860 15..859 2099 47.1 Plus
Dana\GF12330-PA 891 GF12330-PA 47..889 13..859 2099 47.4 Plus
Dana\GF12332-PA 866 GF12332-PA 20..866 15..861 1994 43.5 Plus
Dana\GF12331-PA 866 GF12331-PA 24..864 19..859 1893 43.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:07:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20912-PA 854 GG20912-PA 1..854 8..861 4480 97 Plus
Dere\GG21963-PA 867 GG21963-PA 23..864 13..858 2192 49.4 Plus
Dere\GG21965-PA 872 GG21965-PA 27..870 15..859 2161 47.7 Plus
Dere\GG21964-PA 866 GG21964-PA 19..864 14..859 1805 42.5 Plus
Dere\GG20280-PA 875 GG20280-PA 24..873 13..859 1724 41.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:07:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21200-PA 882 GH21200-PA 22..882 1..861 3800 78.2 Plus
Dgri\GH20679-PA 891 GH20679-PA 47..890 14..860 2115 46.9 Plus
Dgri\GH20682-PA 862 GH20682-PA 4..860 2..859 2080 45.7 Plus
Dgri\GH20681-PA 867 GH20681-PA 9..865 4..859 2024 45.5 Plus
Dgri\GH20688-PA 859 GH20688-PA 9..857 14..859 1855 41.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG9416-PB 861 CG9416-PB 1..861 1..861 4599 100 Plus
CG9416-PA 861 CG9416-PA 1..861 1..861 4599 100 Plus
CG11961-PC 891 CG11961-PC 49..888 15..858 2211 49.3 Plus
CG11961-PA 891 CG11961-PA 49..888 15..858 2211 49.3 Plus
CG11961-PB 867 CG11961-PB 25..864 15..858 2211 49.3 Plus
CG10062-PA 862 CG10062-PA 18..860 16..859 2129 47.3 Plus
CG10062-PC 868 CG10062-PC 18..866 16..859 2118 47.1 Plus
CG10062-PD 819 CG10062-PD 2..817 42..859 2063 47.7 Plus
CG10051-PA 866 CG10051-PA 24..864 19..859 1933 43.6 Plus
CG30049-PA 878 CG30049-PA 28..869 14..852 1802 42 Plus
CG30047-PA 879 CG30047-PA 29..877 14..859 1788 40.9 Plus
CG33012-PC 912 CG33012-PC 62..910 16..859 1751 38.6 Plus
CG30043-PA 878 CG30043-PA 28..869 14..852 1732 40.5 Plus
CG13160-PB 875 CG13160-PB 15..870 6..856 1683 38.4 Plus
CG13160-PA 874 CG13160-PA 14..869 6..856 1683 38.4 Plus
CG10073-PC 881 CG10073-PC 44..879 19..859 1593 39.5 Plus
CG10073-PA 873 CG10073-PA 36..871 19..859 1593 39.5 Plus
CG10081-PA 875 CG10081-PA 33..873 16..859 1548 38.9 Plus
CG10081-PB 873 CG10081-PB 33..871 16..859 1537 38.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:07:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20486-PA 861 GI20486-PA 1..861 1..861 3829 79 Plus
Dmoj\GI19043-PA 892 GI19043-PA 47..890 13..859 2143 47.5 Plus
Dmoj\GI19045-PA 862 GI19045-PA 17..860 15..859 2094 48.4 Plus
Dmoj\GI19044-PA 865 GI19044-PA 20..863 15..859 2016 45.7 Plus
Dmoj\GI18384-PA 875 GI18384-PA 25..873 11..859 1694 41 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:07:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10445-PA 861 GL10445-PA 1..861 1..861 4222 88.3 Plus
Dper\GL11616-PA 894 GL11616-PA 51..892 15..859 2141 47.2 Plus
Dper\GL11618-PA 862 GL11618-PA 17..860 15..859 2126 48.2 Plus
Dper\GL11617-PA 866 GL11617-PA 24..866 19..861 2075 45.8 Plus
Dper\GL11625-PA 879 GL11625-PA 27..870 13..852 1902 42.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:07:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21772-PA 861 GA21772-PA 1..861 1..861 4229 88.4 Plus
Dpse\GA11297-PA 894 GA11297-PA 51..892 15..859 2139 47.2 Plus
Dpse\GA24794-PA 862 GA24794-PA 17..860 15..859 2121 48.1 Plus
Dpse\GA10034-PA 866 GA10034-PA 24..866 19..861 2070 45.7 Plus
Dpse\GA15600-PA 879 GA15600-PA 27..870 13..852 1892 42.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:07:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19836-PA 854 GM19836-PA 1..854 8..861 4545 98.8 Plus
Dsec\GM21951-PA 885 GM21951-PA 47..882 13..858 2173 48.5 Plus
Dsec\GM21953-PA 862 GM21953-PA 17..860 15..859 2128 47.3 Plus
Dsec\GM21365-PA 878 GM21365-PA 28..876 13..859 1762 41.5 Plus
Dsec\GM21370-PA 927 GM21370-PA 61..925 15..859 1661 37.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:07:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25326-PA 856 GD25326-PA 1..856 8..861 4483 97.7 Plus
Dsim\GD11447-PA 867 GD11447-PA 23..864 13..858 2180 49.1 Plus
Dsim\GD11449-PA 862 GD11449-PA 17..860 15..859 2126 47.6 Plus
Dsim\GD11448-PA 815 GD11448-PA 6..813 52..859 1820 43.6 Plus
Dsim\GD10862-PA 879 GD10862-PA 28..877 13..859 1772 41.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:07:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22338-PA 883 GJ22338-PA 23..883 1..861 3899 80.6 Plus
Dvir\GJ20011-PA 892 GJ20011-PA 43..890 9..859 2202 47.2 Plus
Dvir\GJ20012-PA 865 GJ20012-PA 23..863 19..859 2002 44.7 Plus
Dvir\GJ20013-PA 865 GJ20013-PA 20..863 15..859 1969 46.4 Plus
Dvir\GJ20020-PA 885 GJ20020-PA 36..883 14..859 1843 40.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:07:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20800-PA 861 GK20800-PA 1..861 1..861 4021 83.3 Plus
Dwil\GK20842-PA 892 GK20842-PA 46..890 13..859 2184 47.9 Plus
Dwil\GK20844-PA 861 GK20844-PA 2..859 2..859 2085 47.1 Plus
Dwil\GK20843-PA 867 GK20843-PA 24..867 19..861 2055 46.5 Plus
Dwil\GK23251-PA 904 GK23251-PA 44..895 1..852 1876 43.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:07:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13851-PA 861 GE13851-PA 1..861 1..861 4579 98.1 Plus
Dyak\GE12041-PA 867 GE12041-PA 25..864 15..858 2169 49.3 Plus
Dyak\GE12043-PA 862 GE12043-PA 17..860 15..859 2116 47.5 Plus
Dyak\GE12042-PA 866 GE12042-PA 24..864 19..859 1871 43.6 Plus
Dyak\GE12443-PA 910 GE12443-PA 59..908 15..859 1738 39.3 Plus

RE28322.hyp Sequence

Translation from 258 to 2843

> RE28322.hyp
MKSKYENMKIIYNRSKIGWYWAPLFVSCWFLLFYLVVIPSFHRMPQLKTL
EDERQQPGQFIGERAENTLLRLSKIGPKVVGSAANEQVAVQFLLSEIGDI
IDDARTDLYDIEKDVQVASGNYLLWSMVNVYQSIQNVVVKLSPKNATSEA
ALLINSHFDSVPGSSGAGDAGMMCVIMLEVLRVITKYETPLTYSVVFLFN
GAEENPLQGSHAFITQHPWAQNIRAVINLDSAGSGGREILFQSGPDHPWL
MKYYGKNIVHPFASTIGEELFQNGFVPSETDYRVFRDYGHIPGLDMAQTL
NGYVYHTKYDRFNLIPRRTYQLTGENILALVKALANAEELENPSKYAEGH
MIFFDMMGWFFVYYPETTGIIINITVCVLVCVTIVLYIWMMSSSTGMFRR
RIWAKFGILAALQLAGVALGIGLVISIALFLDAVNLPMSWFSQNWMLFGL
YFCPMIFGMGIVPAIYFSRTKEHGLPLGYGIQLLMHSHCLILTIITAIMV
SYSIRSAFVIMLCIGFYTLSVLINLVTKAHKTNFLWLIPHCICQVLPFMF
YTYCCYAFYVVFVPMQGRECNTNPEILMGFFTALMVLLFAPFLVPLFCLF
RKSKTIISMFGICTIVFIIFAATPIAFPYAEKTAPQRFFAVHTARTFHNG
DPASTVSHKDSGYFVLPVDRRPHTVDDILFENTNFTKSERIDCDSELMCG
FPIYSSRWLNAVDNSYFVPGPEPNREYIPTLTILEKSSNSDTNIRFDLEI
SGPDHTSIFILPLNDSKLVDWSFIRDPLDGNVKPPYYVYWSYALDPKPLQ
FSLEFEHEDPNWSGGTFKIALMGHRIHDDMYITEDFREFLATFPPWAHVS
SWLGSYNSWQL*

RE28322.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:41:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG9416-PB 861 CG9416-PB 1..861 1..861 4599 100 Plus
CG9416-PA 861 CG9416-PA 1..861 1..861 4599 100 Plus
CG11961-PB 867 CG11961-PB 25..864 15..858 2211 49.3 Plus
CG11961-PC 891 CG11961-PC 49..888 15..858 2211 49.3 Plus
CG11961-PA 891 CG11961-PA 49..888 15..858 2211 49.3 Plus