BDGP Sequence Production Resources |
Search the DGRC for RE28342
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 283 |
Well: | 42 |
Vector: | pFlc-1 |
Associated Gene/Transcript | bou-RA |
Protein status: | RE28342.pep: gold |
Preliminary Size: | 450 |
Sequenced Size: | 714 |
Gene | Date | Evidence |
---|---|---|
CG14430 | 2001-12-14 | Blastp of sequenced clone |
CG14430 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14430 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14430 | 2008-04-29 | Release 5.5 accounting |
CG14430 | 2008-08-15 | Release 5.9 accounting |
CG14430 | 2008-12-18 | 5.12 accounting |
714 bp (714 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071242
> RE28342.complete TGAGTATAAACTTGGCATTTGCTGACGACGCTGACTGTTTGATTTACCTA GAGTAGAGAATCGTAAAACGTACTGCTGTGACGTAATCATGTGGCCGCCC AAGCACGCCCACATTGGCTGGCTTTCAAGCCTTGCTCTCGTCGTTCTCCT GATGAGCCTGCAAATGGTAATGGTATCGGGGATCGAGTGCTACGTGTGCG ACACGAGCGATACGGAGCATCCGTTCCAGTGCGGCGAGTGGTTCGAGCGA TACGACATACCGGACATTCAACCCCAAAATTGTTCCAGTGTCCATGGCGC CCAGTTCTGTGTGAAGCACGTGGGTCGTTTTGAGGGTGGAATCGGGGCGA AGAGGTTCTGCAGTTCGAAGGACATGGGCAACTATTGTGACTATGTGCGA AACAAGGGCGATCGCATGGACTATCGCAGCTGCATTTACACTTGTGATAC GGACGGTTGCAATGCCGCTGGAAGGCTGGAACTGGAATGGGGCGTGGCAG CGGCCCTCCTCACTCTCACATGGCTCTTACGGCACTGACAGCATCGGGCG GATAGATATAAGTGACGAAAGAGCTGCATCGCTACATTAATTTTTTTTCG TTAATTATAAGTTGTAACAAAGTAACTGACACACAAAACAGACACTCTAG TATAGGTAAAAACGAAAACCAAAAACAAAAATATATAAACAAATACGGAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
bou-RA | 714 | bou-RA | 4..708 | 3..707 | 3510 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6878646..6879341 | 3..698 | 3480 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 6986493..6987197 | 3..707 | 3510 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 6994591..6995295 | 3..707 | 3510 | 99.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6878643..6879341 | 1..698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14430-RA | 1..450 | 89..538 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bou-RA | 1..450 | 89..538 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bou-RA | 1..450 | 89..538 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14430-RA | 1..450 | 89..538 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bou-RA | 1..450 | 89..538 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14430-RA | 1..699 | 1..698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bou-RA | 1..699 | 1..698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bou-RA | 4..702 | 1..698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14430-RA | 1..699 | 1..698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bou-RA | 5..703 | 1..698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6986490..6987188 | 1..698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6986490..6987188 | 1..698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6986490..6987188 | 1..698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6880523..6881221 | 1..698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6994588..6995286 | 1..698 | 99 | Plus |
Translation from 88 to 537
> RE28342.pep MWPPKHAHIGWLSSLALVVLLMSLQMVMVSGIECYVCDTSDTEHPFQCGE WFERYDIPDIQPQNCSSVHGAQFCVKHVGRFEGGIGAKRFCSSKDMGNYC DYVRNKGDRMDYRSCIYTCDTDGCNAAGRLELEWGVAAALLTLTWLLRH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20356-PA | 159 | GF20356-PA | 30..159 | 26..149 | 567 | 83.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19625-PA | 148 | GG19625-PA | 1..148 | 1..149 | 761 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24685-PA | 147 | GH24685-PA | 26..132 | 32..137 | 504 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
bou-PA | 149 | CG14430-PA | 1..149 | 1..149 | 839 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21667-PA | 148 | GI21667-PA | 28..143 | 32..144 | 527 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26819-PA | 151 | GL26819-PA | 28..148 | 32..147 | 526 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12978-PA | 151 | GA12978-PA | 28..148 | 32..147 | 526 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17496-PA | 149 | GM17496-PA | 1..149 | 1..149 | 797 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16825-PA | 149 | GD16825-PA | 1..149 | 1..149 | 801 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15792-PA | 142 | GJ15792-PA | 22..135 | 31..143 | 530 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18854-PA | 147 | GK18854-PA | 12..144 | 16..143 | 507 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15693-PA | 149 | GE15693-PA | 1..149 | 1..149 | 783 | 97.3 | Plus |
Translation from 88 to 537
> RE28342.hyp MWPPKHAHIGWLSSLALVVLLMSLQMVMVSGIECYVCDTSDTEHPFQCGE WFERYDIPDIQPQNCSSVHGAQFCVKHVGRFEGGIGAKRFCSSKDMGNYC DYVRNKGDRMDYRSCIYTCDTDGCNAAGRLELEWGVAAALLTLTWLLRH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
bou-PA | 149 | CG14430-PA | 1..149 | 1..149 | 839 | 100 | Plus |