BDGP Sequence Production Resources |
Search the DGRC for RE28586
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 285 |
Well: | 86 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14806-RA |
Protein status: | RE28586.pep: gold |
Sequenced Size: | 755 |
Gene | Date | Evidence |
---|---|---|
CG14806-RA | 2009-01-21 | est gleaning |
CG14806 | 2009-06-08 | Manual selection by Joe Carlson |
755 bp assembled on 2009-08-28
GenBank Submission: BT099656.1
> RE28586.complete GATAACCGAAAAATGAACAAATGTTTTAGGTGCCAGCCCCGGATATCGCT TTTCCAGTTCAGCCTACCGCGGTGCTATGCCGCAGTGCAGCCGGGATGTC CACCGCCACAAGAAAAACCCGTCGTCGGTTTGCCACACAAGCCCGATCCC AAGACGGTGAAGTGCGACTATATAGGACCGCCAGACGCGCAATCAAACCT ACGTCCGTACGTACGGCACTACGGCGATGAGGAGACGCGGCTGGCAAGAA GCCTGCGTCTTAAGCGGATCGAGGTGGAGGCATGGAACACGGACTTCTGG ACAAAACACAATAAGCGCTTCTACGAGGAAAAGGAAGACTTCATCCGCCT GCACAAGGAAAGCGGAACCAGCGAAGTGTCCGCGGACCAGATGAGCCACT TCTACAAAGCGTTCCTCGACAAGAACTGGCGCATCCACATCATGTACAAC ATCTCCTGGTACCTGAAGAACTTCGACATACTCACCCTGGCTGCCGCAGT CCAGCTCCAGAGGCTTCTGGCGCTGGCCAAGCGAAGATCTTAGGTGCAAT ATCTGTCGTCCCCATTTCGTAATTTCCAGTTTGCCGTTTGCAATAAGTTG GAATAAAAGATCACGTGCGTAAAATGGTGGCATAAAATTTACTTAGCTAC TATTTAAGGGGATGAAAAATACACGTTGTTCGGAGTTAGTTAATGTACTT AAAAGTAATCGCAAACTATTTAAATAAAATAAAATAGAAGAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1774861..1775275 | 326..740 | 2075 | 100 | Plus |
chrX | 22417052 | chrX | 1774526..1774790 | 64..328 | 1325 | 100 | Plus |
chrX | 22417052 | chrX | 1774405..1774466 | 2..63 | 310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1774404..1774466 | 1..63 | 98 | -> | Plus |
chrX | 1774526..1774789 | 64..327 | 100 | -> | Plus |
chrX | 1774863..1775275 | 328..740 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14806-RA | 1..531 | 13..543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14806-RA | 1..531 | 13..543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14806-RA | 1..531 | 13..543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14806-RA | 1..531 | 13..543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14806-RA | 265..1004 | 1..740 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14806-RA | 265..1004 | 1..740 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14806-RA | 280..1019 | 1..740 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14806-RA | 280..1019 | 1..740 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1880683..1880946 | 64..327 | 100 | -> | Plus |
X | 1880561..1880623 | 1..63 | 98 | -> | Plus |
X | 1881020..1881432 | 328..740 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1880683..1880946 | 64..327 | 100 | -> | Plus |
X | 1880561..1880623 | 1..63 | 98 | -> | Plus |
X | 1881020..1881432 | 328..740 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1880683..1880946 | 64..327 | 100 | -> | Plus |
X | 1880561..1880623 | 1..63 | 98 | -> | Plus |
X | 1881020..1881432 | 328..740 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1774594..1774656 | 1..63 | 98 | -> | Plus |
arm_X | 1774716..1774979 | 64..327 | 100 | -> | Plus |
arm_X | 1775053..1775465 | 328..740 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1888781..1889044 | 64..327 | 100 | -> | Plus |
X | 1889118..1889530 | 328..740 | 100 | Plus | |
X | 1888659..1888721 | 1..63 | 98 | -> | Plus |
Translation from 0 to 542
> RE28586.pep DNRKMNKCFRCQPRISLFQFSLPRCYAAVQPGCPPPQEKPVVGLPHKPDP KTVKCDYIGPPDAQSNLRPYVRHYGDEETRLARSLRLKRIEVEAWNTDFW TKHNKRFYEEKEDFIRLHKESGTSEVSADQMSHFYKAFLDKNWRIHIMYN ISWYLKNFDILTLAAAVQLQRLLALAKRRS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19449-PA | 188 | GF19449-PA | 1..183 | 5..180 | 739 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12888-PA | 176 | GG12888-PA | 1..176 | 5..180 | 915 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17671-PA | 181 | GH17671-PA | 1..172 | 5..173 | 541 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14806-PB | 176 | CG14806-PB | 1..176 | 5..180 | 960 | 100 | Plus |
CG14806-PA | 176 | CG14806-PA | 1..176 | 5..180 | 960 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21489-PA | 84 | GI21489-PA | 2..84 | 98..180 | 339 | 73.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18213-PA | 172 | GL18213-PA | 2..170 | 8..180 | 663 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13262-PA | 172 | GA13262-PA | 2..170 | 8..180 | 663 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19176-PA | 176 | GM19176-PA | 1..176 | 5..180 | 953 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16575-PA | 176 | GD16575-PA | 1..176 | 5..180 | 949 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19030-PA | 84 | GJ19030-PA | 2..84 | 98..180 | 330 | 72.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19240-PA | 54 | GK19240-PA | 1..48 | 131..178 | 183 | 68.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16221-PA | 176 | GE16221-PA | 1..176 | 5..180 | 915 | 95.5 | Plus |
Translation from 0 to 542
> RE28586.hyp HNRKMNKCFRCQPRISLFQFSLPRCYAAVQPGCPPPQEKPVVGLPHKPDP KTVKCDYIGPPDAQSNLRPYVRHYGDEETRLARSLRLKRIEVEAWNTDFW TKHNKRFYEEKEDFIRLHKESGTSEVSADQMSHFYKAFLDKNWRIHIMYN ISWYLKNFDILTLAAAVQLQRLLALAKRRS*