Clone RE29310 Report

Search the DGRC for RE29310

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:293
Well:10
Vector:pFlc-1
Associated Gene/TranscriptD19A-RA
Protein status:RE29310.pep: gold
Sequenced Size:3246

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10269 2004-10-02 Blastp of sequenced clone
D19A 2008-04-29 Release 5.5 accounting
D19A 2008-08-15 Release 5.9 accounting
D19A 2008-12-18 5.12 accounting

Clone Sequence Records

RE29310.complete Sequence

3246 bp (3246 high quality bases) assembled on 2005-08-22

GenBank Submission: BT016008

> RE29310.complete
GCCCACTCGCCCGATTGCCAGTCGACGAGTATACAATTTTTTCTGTGTCA
ATATTATTTTATTGCTTACTGACCGGAGAGAGACGCAAAAAGCTATAGAA
AACCGCCCCGATCCGCAGTGCCGATTGCGATTGAAAGCAAGATGAACGAG
GGCAGGCAGTACTCGATCCACAGCCTGTGCAGGATCTGTCTGAACCACCT
GCAGAACGACGCCGCCTACGATTTGTATCTGGTTCCAGGACTTTCGAAGA
AGCTATGCTTCTGCACATCCCTGTCCGTGGAGCAAAACGACGGATTCCCG
AAGAACCTGTGCACCCTGTGCTACACCAAGCTGAACGAGCTGCACGACTT
TCAGAAACAGTGCGTCGATTCCGTGCAAAAGTTCCAGGATCTGGTGGCCA
GCAATGTCTTTGCCTGCCAGAGCAGCTTCGACGTCTTCGATCCCAACGTT
GCCGTGCAGGACTACCCGGCCGAGGAAGAGGACCACGTCAACTATGACCC
GCTGCTGAACCACAAGATGGAGCTAATCGAGAACGAGGAGGATGTCTTCA
AGATGCTGGAGCACGTCGACAAGGAGGCCGAGGAGGTGGAGAAGGAGGCC
AAGGTGGAGGAGGATGACGGGGGCAACGTTTCCGTCAAGATGTTCGACGA
CGATTCGTCCATCGAGAGCGGCAATGACAACGACCACGATCTGGACTTCG
AGCCAAATAGCAGCGATGATGACATTCCGCTGGCCCAGCGCATGAGGGGA
CCAGCTACCGGATCAGGACCCCAGCAGGACCGTTTTAGCAACCTAGACAA
ACCCAAGCCGAGGCCCCGGGGACGGCCCAAAAAGATAAAACCGCCTCCGC
CAGAGGAGGAGGAGTTGAGCGACTCATCCTCCGAATCAGATGACTCCGAA
GACGGCACATCGCGGGGCGACAAGCCGAAGAGGAAGCGCATTCCCATCGA
GGAACGCCACCTGCACCGCATCATCGACTGCCACATTTGCCACCAGAAGT
TCAAGAAGGCCATCCGCTACGAGGAGCACATGAAGTACCACAACGACCTG
CTGCCCTTCCAATGCAAGGTGGAGACCTGCAAGAAAGGTTTCACTACCGC
CAATGGGCTGCGCATTCACATCGACCACGCCCACACAGAGCTGTCCGAGG
TTCACGCCTGCATCGCCGAGGGCTGCGGCAAGACCTTCCCGCGCGTCCGT
CTGCTCACCTTCCACATGAAGAAGGTGCACGGTATCACCAAGGCGGCTGC
CCCGCTTCGAGATTTCCCCTGCACAGAATGCGACACCGTATTCCGCTGCC
CCACAGCACTCAAGAAGCACATGTATAAGCACACGGGCGAGGAGCTTCCG
TATCCTTGCAATATCTGCGGCAAGCGTTTTGTAATCAATAGTGCTTTAAG
GGATCACCTTATGCGTCACGCAGGCATCAAGAACCATGTGTGTCCGTACT
GCGGGGTGGGCAAGACGACGCGCCAGGAATGGAACGCCCACATCCTCACG
CACACCAAGGAGAAAAAGTTCAAGTGCCGACAGTGCGACCATGCCTCGCA
CAACAAACAGGCGTTGTCCAATCATGTAAAGGTGGTGCACGAAAAGCGCA
AGGACTTTGCCTGCCAGTACTGCGGAAAGACCTTCGGCAAGTCGCACGCC
TGCAAGGTGCACGAGAGGAGTCACACGGGGGAGAAGTGCTGCGAGTGCAA
GATCTGCGGCAAGATATTCCTCTGCGAGAAGAGCCTCACCAAGCATTTGA
AGACGCACGAGAAAAGGGATCTGCCGCCGGCGGAGCCCCTTCGCCAGCAG
CTTAACATTCCCATGCCCGGCCAAATGTCCGTACCGATGCCGGGCCAGAT
GCCGATGCAGATGCAGACGGATGGTTTGGTGCCAATGGACCCCAACCAGA
TGCCTAGTGAGGACATGCTGAAGGCATGCGGCGGCGGGACCGCTGCAGTG
CCTCCCAAACCGAAGAACTCGCGACGCGTCCAGCGGGTGGACATTTCTCA
GCTGGCGGGTACTGCGGTAAATCCAATACCATCCGTATCCGTGCCCTCGT
GGTCGCCGCAAGTGAACTTCACCAAGAAGGAAGGCCAGCACATCTGTCCA
GGCTGTGGGCGTGGCTTCAATAATATTGGAAACATGAAACTTCACTACAA
AATCATCCACGAGAAGGTCAAGGACTTTGCCTGTCGCTTCTGCCCGAAGA
GATTCTCCAAGGCACAGATTCTGCGGCATCACGAATGGATCCACACGGGC
GAGAAGCCCTTCGAGTGCAAGATTTGTGGCAAACACTTCCGCCAGGAGAC
GGCACTCAAGAAACACATCAAGACGCACGAGAAGCCGAACCGGAGACACG
TGCCCGAGCGCAGTGCGCCCACTCAGATCACGTTCCGCAAGCTGGAGCCA
GACGCCGAGCCGCGTAACTTTGACCAGTATCAGGATCCGGCGGTGGAGCG
GGCAGCGGCCACCGCTGAGCTGCTGGCGCACCAGCTGGAGGAGAACGAGG
CCAAGCGGAAGGCGGAAATTGAGCGGCAGAAGATCGCGGCGGCGGCCTGC
GAGCAGCTGACGAAGCTGCAGCAGCAGCAGGAGATCATCAAGGCGACCAC
CTCGTACGATGGCTACTATGCGCAGAAAGCGCAATCCGAGGGCACCAGCC
TGGATGCCCTGAAGATCGACCACGTCTAGGCAGCAGGATTGGCTTTACTT
TACTAGCATATATGCATCATAACCTAGCCACATCCATATGTATCCACTTC
CAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCT
CTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAGATTATTCGAGT
GCATATTACAATATGAACACTTCATACTTTTTACGTACTACGTTTATACA
TACATGCAATATATGTATTATTTTGTTTTCCGTGTAATATCTCCCGTGCT
TACTTAGAGTAATGGATTAAAAGTAATATTCATAACGCCATTGGAGTTTC
CATCTGGTGGGCGGGACTAAGAGACCACTTTGCAATACCAGTGATTTTTA
CAAATATATTTTAATAACAAAAAACAAATTTTTTAGCCCGCAAGAACATT
AATCAAACCTTAATTTAATTAAAATAAGTCATTTTTAGCTGAAATCCATC
TGGATGGTTATGCTGAATTTTATTTCATATATTCCGTTCTTTAAATTTAG
ACAAATAAAGATGATAATTGATTTTTAATCAAAAAAAAAAAAAAAA

RE29310.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:31:04
Subject Length Description Subject Range Query Range Score Percent Strand
D19A-RA 3315 D19A-RA 86..3315 1..3230 16150 100 Plus
CG10274-RB 3071 CG10274-RB 1048..1696 1115..1763 1235 79.3 Plus
D19B-RA 2861 D19B-RA 1480..1831 1412..1763 1205 89.4 Plus
CG10274-RB 3071 CG10274-RB 1917..2228 1999..2310 660 80.7 Plus
CG10274-RB 3071 CG10274-RB 885..1033 952..1100 580 92.6 Plus
D19B-RA 2861 D19B-RA 402..571 250..419 445 84.1 Plus
D19B-RA 2861 D19B-RA 1041..1217 964..1140 435 83 Plus
D19B-RA 2861 D19B-RA 1929..2104 1975..2150 400 81.8 Plus
D19B-RA 2861 D19B-RA 2388..2534 2431..2577 360 82.9 Plus
CG10274-RB 3071 CG10274-RB 487..595 488..596 350 88 Plus
D19B-RA 2861 D19B-RA 618..749 466..597 330 83.3 Plus
D19B-RA 2861 D19B-RA 2118..2291 2164..2337 300 78.1 Plus
D19B-RA 2861 D19B-RA 1332..1414 1264..1346 280 89.1 Plus
CG10274-RB 3071 CG10274-RB 228..392 247..411 225 75.7 Plus
CG10274-RB 3071 CG10274-RB 2581..2691 2567..2677 165 76.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:03:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 6178340..6180481 3230..1086 10540 99.5 Minus
chr3L 24539361 chr3L 6180539..6181627 1089..1 5400 99.7 Minus
chr3L 24539361 chr3L 6175714..6176213 1763..1264 1435 85.8 Minus
chr3L 24539361 chr3L 6172691..6173277 1701..1115 1180 80.1 Minus
chr3L 24539361 chr3L 6176855..6177202 597..250 690 79.9 Minus
chr3L 24539361 chr3L 6172032..6172343 2310..1999 660 80.8 Minus
chr3L 24539361 chr3L 6175254..6175616 2337..1975 645 78.5 Minus
chr3L 24539361 chr3L 6173357..6173494 1089..952 510 91.3 Minus
chr3L 24539361 chr3L 6183237..6183626 1312..1701 495 75.1 Plus
chr3L 24539361 chr3L 6175011..6175163 2577..2425 375 83 Minus
chr3L 24539361 chr3L 6173784..6173892 596..488 350 88.1 Minus
chr3L 24539361 chr3L 6176461..6176563 1066..964 350 89.3 Minus
chr3L 24539361 chr3L 6171569..6171824 2677..2422 245 73 Minus
chr3L 24539361 chr3L 6173987..6174151 411..247 225 75.8 Minus
chr3L 24539361 chr3L 6182447..6182518 279..350 210 86.1 Plus
chr3L 24539361 chr3L 6184009..6184174 2131..2296 200 74.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:47:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:03:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6185830..6187974 3230..1086 10725 100 Minus
3L 28110227 3L 6188032..6189120 1089..1 5445 100 Minus
3L 28110227 3L 6183204..6183703 1763..1264 1435 85.8 Minus
3L 28110227 3L 6180181..6180767 1701..1115 1180 80.1 Minus
3L 28110227 3L 6184346..6184693 597..250 690 79.9 Minus
3L 28110227 3L 6179522..6179833 2310..1999 660 80.8 Minus
3L 28110227 3L 6182744..6183106 2337..1975 645 78.5 Minus
3L 28110227 3L 6180847..6180984 1089..952 540 92.8 Minus
3L 28110227 3L 6190735..6191124 1312..1701 465 74.6 Plus
3L 28110227 3L 6182501..6182647 2577..2431 360 83 Minus
3L 28110227 3L 6181274..6181382 596..488 350 88.1 Minus
3L 28110227 3L 6183952..6184054 1066..964 350 89.3 Minus
3L 28110227 3L 6179059..6179310 2677..2426 240 73 Minus
3L 28110227 3L 6181477..6181641 411..247 225 75.8 Minus
3L 28110227 3L 6189945..6190016 279..350 210 86.1 Plus
3L 28110227 3L 6191507..6191672 2131..2296 200 74.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:21:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 6178930..6181074 3230..1086 10725 100 Minus
3L 28103327 3L 6181132..6182220 1089..1 5445 100 Minus
3L 28103327 3L 6176304..6176655 1763..1412 1205 89.4 Minus
3L 28103327 3L 6173281..6173867 1701..1115 1180 80 Minus
3L 28103327 3L 6172622..6172933 2310..1999 660 80.7 Minus
3L 28103327 3L 6173947..6174084 1089..952 540 92.7 Minus
3L 28103327 3L 6177624..6177793 419..250 445 84.1 Minus
3L 28103327 3L 6176031..6176206 2150..1975 400 81.8 Minus
3L 28103327 3L 6183835..6184006 1312..1483 380 81.3 Plus
3L 28103327 3L 6175601..6175747 2577..2431 360 82.9 Minus
3L 28103327 3L 6174374..6174482 596..488 350 88 Minus
3L 28103327 3L 6177052..6177154 1066..964 350 89.3 Minus
3L 28103327 3L 6177446..6177577 597..466 330 83.3 Minus
3L 28103327 3L 6175844..6176017 2337..2164 300 78.1 Minus
3L 28103327 3L 6176721..6176803 1346..1264 280 89.1 Minus
3L 28103327 3L 6174577..6174741 411..247 225 75.7 Minus
3L 28103327 3L 6183045..6183116 279..350 210 86.1 Plus
3L 28103327 3L 6184129..6184224 1606..1701 195 80.2 Plus
3L 28103327 3L 6184702..6184772 2226..2296 190 84.5 Plus
3L 28103327 3L 6172159..6172269 2677..2567 165 76.5 Minus
3L 28103327 3L 6183256..6183332 499..575 160 80.5 Plus
3L 28103327 3L 6183543..6183603 1020..1080 140 81.9 Plus
Blast to na_te.dros performed 2019-03-16 13:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dtei\I-element 5386 Dtei\I-element DTEII 5386bp 5190..5290 3043..3144 157 65.7 Plus
McClintock 6450 McClintock McCLINTOCK 6450bp 5529..5612 3023..3109 121 63.2 Plus

RE29310.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:04:20 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 6178340..6180479 1088..3230 97 <- Minus
chr3L 6180541..6181005 623..1087 99 == Minus
chr3L 6181057..6181627 1..571 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:07:46 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
D19A-RA 1..2538 142..2679 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:54:09 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
D19A-RA 1..2538 142..2679 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:47:19 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
D19A-RA 1..2538 142..2679 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:34:55 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
D19A-RA 1..2538 142..2679 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:08:44 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
D19A-RA 1..2538 142..2679 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:29:36 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
D19A-RA 1..3206 20..3225 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:54:09 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
D19A-RA 1..3206 20..3225 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:47:19 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
D19A-RA 4..3233 1..3230 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:34:55 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
D19A-RA 1..3206 20..3225 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:08:44 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
D19A-RA 4..3233 1..3230 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:04:20 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6185830..6187972 1088..3230 100 <- Minus
3L 6188034..6189120 1..1087 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:04:20 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6185830..6187972 1088..3230 100 <- Minus
3L 6188034..6189120 1..1087 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:04:20 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6185830..6187972 1088..3230 100 <- Minus
3L 6188034..6189120 1..1087 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:47:19 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6178930..6181072 1088..3230 100 <- Minus
arm_3L 6181134..6182220 1..1087 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:13:26 Download gff for RE29310.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6178930..6181072 1088..3230 100 <- Minus
3L 6181134..6182220 1..1087 100   Minus

RE29310.pep Sequence

Translation from 141 to 2678

> RE29310.pep
MNEGRQYSIHSLCRICLNHLQNDAAYDLYLVPGLSKKLCFCTSLSVEQND
GFPKNLCTLCYTKLNELHDFQKQCVDSVQKFQDLVASNVFACQSSFDVFD
PNVAVQDYPAEEEDHVNYDPLLNHKMELIENEEDVFKMLEHVDKEAEEVE
KEAKVEEDDGGNVSVKMFDDDSSIESGNDNDHDLDFEPNSSDDDIPLAQR
MRGPATGSGPQQDRFSNLDKPKPRPRGRPKKIKPPPPEEEELSDSSSESD
DSEDGTSRGDKPKRKRIPIEERHLHRIIDCHICHQKFKKAIRYEEHMKYH
NDLLPFQCKVETCKKGFTTANGLRIHIDHAHTELSEVHACIAEGCGKTFP
RVRLLTFHMKKVHGITKAAAPLRDFPCTECDTVFRCPTALKKHMYKHTGE
ELPYPCNICGKRFVINSALRDHLMRHAGIKNHVCPYCGVGKTTRQEWNAH
ILTHTKEKKFKCRQCDHASHNKQALSNHVKVVHEKRKDFACQYCGKTFGK
SHACKVHERSHTGEKCCECKICGKIFLCEKSLTKHLKTHEKRDLPPAEPL
RQQLNIPMPGQMSVPMPGQMPMQMQTDGLVPMDPNQMPSEDMLKACGGGT
AAVPPKPKNSRRVQRVDISQLAGTAVNPIPSVSVPSWSPQVNFTKKEGQH
ICPGCGRGFNNIGNMKLHYKIIHEKVKDFACRFCPKRFSKAQILRHHEWI
HTGEKPFECKICGKHFRQETALKKHIKTHEKPNRRHVPERSAPTQITFRK
LEPDAEPRNFDQYQDPAVERAAATAELLAHQLEENEAKRKAEIERQKIAA
AACEQLTKLQQQQEIIKATTSYDGYYAQKAQSEGTSLDALKIDHV*

RE29310.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:21:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10911-PA 829 GF10911-PA 1..829 1..845 3748 86 Plus
Dana\GF10912-PA 779 GF10912-PA 1..779 1..845 2785 65.3 Plus
Dana\GF10913-PA 862 GF10913-PA 4..862 3..845 2776 62.9 Plus
Dana\GF23532-PA 693 GF23532-PA 140..681 237..831 1555 53.7 Plus
Dana\GF10900-PA 437 GF10900-PA 128..418 235..543 422 33 Plus
Dana\GF23532-PA 693 GF23532-PA 2..142 3..148 355 49.3 Plus
Dana\GF10900-PA 437 GF10900-PA 149..429 399..744 231 26.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:21:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14071-PA 849 GG14071-PA 1..849 1..845 4498 98.5 Plus
Dere\GG14073-PA 864 GG14073-PA 9..864 6..845 2788 63.6 Plus
Dere\GG14072-PA 773 GG14072-PA 1..773 1..845 2698 64.5 Plus
Dere\GG15333-PA 708 GG15333-PA 130..697 211..830 1580 50.8 Plus
Dere\GG14057-PA 446 GG14057-PA 169..431 280..543 446 36.7 Plus
Dere\GG15333-PA 708 GG15333-PA 7..187 6..202 413 44.5 Plus
Dere\GG14057-PA 446 GG14057-PA 339..428 641..730 204 41.1 Plus
Dere\GG14057-PA 446 GG14057-PA 297..432 283..431 156 34.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:21:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16291-PA 842 GH16291-PA 1..842 1..845 3373 78 Plus
Dgri\GH16297-PA 872 GH16297-PA 1..872 1..845 2840 64.4 Plus
Dgri\GH16292-PA 767 GH16292-PA 1..767 1..845 2488 59.4 Plus
Dgri\GH16293-PA 801 GH16293-PA 1..796 1..843 2264 59.2 Plus
Dgri\GH16294-PA 808 GH16294-PA 1..803 1..843 2263 59.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:40:56
Subject Length Description Subject Range Query Range Score Percent Strand
D19A-PA 845 CG10269-PA 1..845 1..845 4611 100 Plus
D19B-PA 774 CG10270-PA 1..774 1..845 2928 66 Plus
CG10274-PB 863 CG10274-PB 6..863 3..845 2891 62.9 Plus
CG7386-PA 662 CG7386-PA 4..661 6..823 1649 41.7 Plus
CG10147-PB 448 CG10147-PB 154..433 262..543 516 36.1 Plus
CG10147-PA 448 CG10147-PA 154..433 262..543 516 36.1 Plus
Meics-PA 583 CG8474-PA 59..526 48..545 348 24.5 Plus
Meics-PB 571 CG8474-PB 59..514 48..545 347 25 Plus
CG4360-PA 556 CG4360-PA 147..554 345..729 345 26.8 Plus
crol-PF 907 CG14938-PF 223..468 280..539 342 31.1 Plus
crol-PG 878 CG14938-PG 223..467 280..539 340 31.8 Plus
crol-PD 878 CG14938-PD 223..467 280..539 338 32.2 Plus
CG5245-PA 501 CG5245-PA 153..410 271..539 337 30.3 Plus
crol-PB 891 CG14938-PB 419..666 280..541 334 31.2 Plus
crol-PD 878 CG14938-PD 363..612 280..539 332 30.7 Plus
crol-PB 891 CG14938-PB 223..495 280..539 331 30.8 Plus
crol-PI 962 CG14938-PI 223..495 280..539 331 30.8 Plus
crol-PE 962 CG14938-PE 223..495 280..539 331 30.8 Plus
crol-PA 962 CG14938-PA 223..495 280..539 331 30.8 Plus
dwg-PA 592 CG2711-PA 41..541 34..557 330 22.2 Plus
jim-PH 820 CG11352-PH 323..700 426..802 329 24.8 Plus
jim-PD 820 CG11352-PD 323..700 426..802 329 24.8 Plus
jim-PC 820 CG11352-PC 323..700 426..802 329 24.8 Plus
jim-PF 938 CG11352-PF 323..700 426..802 329 24.8 Plus
crol-PF 907 CG14938-PF 363..641 280..539 328 28.4 Plus
crol-PH 686 CG14938-PH 185..436 280..545 327 29.3 Plus
crol-PB 891 CG14938-PB 363..607 280..539 324 31.9 Plus
crol-PI 962 CG14938-PI 419..696 280..539 324 29.5 Plus
crol-PE 962 CG14938-PE 419..696 280..539 324 29.5 Plus
crol-PA 962 CG14938-PA 419..696 280..539 324 29.5 Plus
crol-PC 756 CG14938-PC 213..490 280..539 324 29.5 Plus
CG2202-PA 889 CG2202-PA 282..732 82..539 324 24.6 Plus
crol-PB 891 CG14938-PB 335..579 280..539 322 30.7 Plus
crol-PH 686 CG14938-PH 213..461 280..541 322 31.1 Plus
crol-PC 756 CG14938-PC 185..460 280..541 322 28.7 Plus
CG5245-PA 501 CG5245-PA 9..328 228..541 319 29.6 Plus
CG3032-PB 431 CG3032-PB 122..431 232..541 319 27 Plus
CG3032-PA 431 CG3032-PA 122..431 232..541 319 27 Plus
CG12299-PA 736 CG12299-PA 267..501 259..511 319 31.6 Plus
crol-PB 891 CG14938-PB 391..641 280..545 318 28.9 Plus
CG32772-PE 520 CG32772-PE 71..416 190..575 317 28.1 Plus
CG32772-PC 520 CG32772-PC 71..416 190..575 317 28.1 Plus
CG8301-PA 607 CG8301-PA 49..604 43..556 317 22.9 Plus
CG5245-PA 501 CG5245-PA 34..274 285..543 315 30.2 Plus
CG1529-PD 512 CG1529-PD 174..383 345..542 315 37.3 Plus
CG1529-PC 512 CG1529-PC 174..383 345..542 315 37.3 Plus
crol-PG 878 CG14938-PG 335..612 280..539 312 29.1 Plus
crol-PB 891 CG14938-PB 293..551 271..539 311 29.5 Plus
CG2889-PB 581 CG2889-PB 2..556 12..537 310 23.6 Plus
CG2889-PA 581 CG2889-PA 2..556 12..537 310 23.6 Plus
CG6254-PA 634 CG6254-PA 181..623 106..580 310 23.8 Plus
su(Hw)-PC 941 CG8573-PC 296..620 229..540 306 27.9 Plus
su(Hw)-PB 941 CG8573-PB 296..620 229..540 306 27.9 Plus
su(Hw)-PA 941 CG8573-PA 296..620 229..540 306 27.9 Plus
CG6654-PA 639 CG6654-PA 359..606 309..543 302 30 Plus
CG5245-PA 501 CG5245-PA 131..388 272..545 300 27.4 Plus
CG10959-PA 443 CG10959-PA 186..421 294..540 299 29.6 Plus
CG2129-PA 465 CG2129-PA 235..463 309..544 299 31.1 Plus
CG10959-PB 441 CG10959-PB 204..419 313..540 297 30.4 Plus
CG5245-PA 501 CG5245-PA 243..492 273..537 296 28.2 Plus
CG11695-PA 544 CG11695-PA 2..511 12..557 296 23.3 Plus
CG15436-PA 346 CG15436-PA 95..341 238..536 295 26.1 Plus
CG11247-PC 522 CG11247-PC 57..372 238..542 294 25.8 Plus
CG11247-PA 522 CG11247-PA 57..372 238..542 294 25.8 Plus
CG11247-PB 522 CG11247-PB 57..372 238..542 294 25.8 Plus
CG32772-PF 374 CG32772-PF 3..270 296..575 291 30.4 Plus
CG32772-PD 374 CG32772-PD 3..270 296..575 291 30.4 Plus
CG11247-PC 522 CG11247-PC 91..383 430..739 291 25.8 Plus
CG11247-PA 522 CG11247-PA 91..383 430..739 291 25.8 Plus
CG11247-PB 522 CG11247-PB 91..383 430..739 291 25.8 Plus
CG5245-PA 501 CG5245-PA 191..466 276..539 288 27.8 Plus
su(Hw)-PC 941 CG8573-PC 290..551 278..545 287 28.1 Plus
su(Hw)-PB 941 CG8573-PB 290..551 278..545 287 28.1 Plus
su(Hw)-PA 941 CG8573-PA 290..551 278..545 287 28.1 Plus
CG7963-PB 354 CG7963-PB 133..351 313..540 286 30.9 Plus
crol-PH 686 CG14938-PH 183..374 338..539 285 32.7 Plus
CG6654-PA 639 CG6654-PA 327..546 297..539 282 32.1 Plus
CG12299-PA 736 CG12299-PA 87..473 130..539 274 24.4 Plus
su(Hw)-PC 941 CG8573-PC 188..491 238..539 265 24.5 Plus
su(Hw)-PB 941 CG8573-PB 188..491 238..539 265 24.5 Plus
su(Hw)-PA 941 CG8573-PA 188..491 238..539 265 24.5 Plus
CG15436-PA 346 CG15436-PA 152..316 373..539 253 32.3 Plus
CG15436-PA 346 CG15436-PA 126..290 375..545 251 31 Plus
CG3032-PB 431 CG3032-PB 157..431 461..731 248 27.6 Plus
CG3032-PA 431 CG3032-PA 157..431 461..731 248 27.6 Plus
CG6654-PA 639 CG6654-PA 414..608 280..486 245 30.6 Plus
crol-PF 907 CG14938-PF 221..417 338..545 241 29.3 Plus
CG15436-PA 346 CG15436-PA 102..346 238..484 234 28 Plus
crol-PC 756 CG14938-PC 177..317 398..539 225 31 Plus
CG10147-PB 448 CG10147-PB 341..430 641..730 222 42.2 Plus
CG10147-PA 448 CG10147-PA 341..430 641..730 222 42.2 Plus
crol-PH 686 CG14938-PH 270..488 280..512 222 29.5 Plus
jim-PH 820 CG11352-PH 387..709 280..590 221 23.8 Plus
jim-PD 820 CG11352-PD 387..709 280..590 221 23.8 Plus
jim-PC 820 CG11352-PC 387..709 280..590 221 23.8 Plus
jim-PF 938 CG11352-PF 387..709 280..590 221 23.8 Plus
CG2129-PA 465 CG2129-PA 267..456 277..480 221 30.7 Plus
crol-PH 686 CG14938-PH 177..318 398..539 214 30.8 Plus
CG12299-PA 736 CG12299-PA 251..502 486..730 214 29.7 Plus
CG6654-PA 639 CG6654-PA 322..490 368..539 213 27.2 Plus
CG10959-PA 443 CG10959-PA 84..418 111..480 199 22.1 Plus
CG15436-PA 346 CG15436-PA 118..260 396..539 196 27.8 Plus
CG10959-PB 441 CG10959-PB 84..416 111..480 194 22.1 Plus
CG5245-PA 501 CG5245-PA 320..491 266..451 188 26.7 Plus
CG4360-PA 556 CG4360-PA 144..231 652..746 186 40 Plus
CG6254-PA 634 CG6254-PA 388..472 645..729 183 36.5 Plus
CG2889-PB 581 CG2889-PB 148..453 236..548 180 23.8 Plus
CG2889-PA 581 CG2889-PA 148..453 236..548 180 23.8 Plus
CG15436-PA 346 CG15436-PA 147..237 644..732 178 40.2 Plus
CG10959-PA 443 CG10959-PA 199..310 430..541 173 33 Plus
CG10959-PB 441 CG10959-PB 197..308 430..541 173 33 Plus
CG12299-PA 736 CG12299-PA 169..339 557..734 169 29.2 Plus
CG6654-PA 639 CG6654-PA 437..523 647..732 168 37.5 Plus
CG32772-PE 520 CG32772-PE 133..221 652..739 167 37.8 Plus
CG32772-PC 520 CG32772-PC 133..221 652..739 167 37.8 Plus
Meics-PA 583 CG8474-PA 411..496 649..735 166 40.2 Plus
Meics-PB 571 CG8474-PB 399..484 649..735 166 40.2 Plus
CG2129-PA 465 CG2129-PA 235..408 518..733 166 26.1 Plus
Meics-PA 583 CG8474-PA 313..416 635..739 165 30.5 Plus
Meics-PB 571 CG8474-PB 301..404 635..739 165 30.5 Plus
su(Hw)-PC 941 CG8573-PC 409..498 646..734 164 33 Plus
su(Hw)-PB 941 CG8573-PB 409..498 646..734 164 33 Plus
su(Hw)-PA 941 CG8573-PA 409..498 646..734 164 33 Plus
CG32772-PE 520 CG32772-PE 156..241 647..731 163 36.8 Plus
CG32772-PC 520 CG32772-PC 156..241 647..731 163 36.8 Plus
CG32772-PF 374 CG32772-PF 10..95 647..731 163 36.8 Plus
CG32772-PD 374 CG32772-PD 10..95 647..731 163 36.8 Plus
dwg-PA 592 CG2711-PA 391..467 652..729 162 37.2 Plus
CG6654-PA 639 CG6654-PA 381..464 648..731 161 39.3 Plus
Meics-PA 583 CG8474-PA 410..583 276..458 159 26.3 Plus
Meics-PB 571 CG8474-PB 398..571 276..458 159 26.3 Plus
CG7963-PB 354 CG7963-PB 217..350 280..426 159 32 Plus
CG32772-PF 374 CG32772-PF 76..235 283..454 158 29.3 Plus
CG32772-PD 374 CG32772-PD 76..235 283..454 158 29.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:21:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13233-PA 838 GI13233-PA 1..838 1..845 3314 77.4 Plus
Dmoj\GI13238-PA 869 GI13238-PA 1..869 1..845 2806 65.1 Plus
Dmoj\GI13236-PA 796 GI13236-PA 1..796 1..845 2543 63.1 Plus
Dmoj\GI13234-PA 791 GI13234-PA 1..787 1..841 2292 56.3 Plus
Dmoj\GI13235-PA 1388 GI13235-PA 646..1386 45..841 2000 55 Plus
Dmoj\GI13235-PA 1388 GI13235-PA 23..645 114..794 1787 55.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:21:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22530-PA 835 GL22530-PA 1..835 1..845 3421 79.2 Plus
Dper\GL15564-PA 859 GL15564-PA 11..859 20..845 2679 64 Plus
Dper\GL15508-PA 301 GL15508-PA 26..301 527..845 825 56.4 Plus
Dper\GL15506-PA 118 GL15506-PA 1..109 1..109 443 73.4 Plus
Dper\GL26275-PA 880 GL26275-PA 382..823 276..729 309 26.8 Plus
Dper\GL26275-PA 880 GL26275-PA 90..254 373..539 212 31.7 Plus
Dper\GL26275-PA 880 GL26275-PA 58..266 238..466 199 27.5 Plus
Dper\GL26275-PA 880 GL26275-PA 97..269 345..526 198 29.1 Plus
Dper\GL15508-PA 301 GL15508-PA 101..194 447..540 183 40.4 Plus
Dper\GL26275-PA 880 GL26275-PA 612..838 280..498 163 25.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:21:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10207-PA 834 GA10207-PA 1..834 1..845 3539 81.3 Plus
Dpse\GA10210-PA 868 GA10210-PA 1..868 1..845 2736 63.5 Plus
Dpse\GA10208-PA 772 GA10208-PA 1..772 1..845 2713 65.2 Plus
Dpse\GA20315-PA 709 GA20315-PA 7..697 7..827 1953 49 Plus
Dpse\GA24525-PA 451 GA24525-PA 178..438 280..541 390 34.7 Plus
Dpse\GA24525-PA 451 GA24525-PA 348..438 641..731 197 40.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:21:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13853-PA 842 GM13853-PA 1..842 1..845 4502 98.8 Plus
Dsec\GM13856-PA 863 GM13856-PA 6..863 3..845 2707 63 Plus
Dsec\GM13855-PA 774 GM13855-PA 1..774 1..845 2654 64.1 Plus
Dsec\GM14770-PA 676 GM14770-PA 142..618 230..732 1377 52.3 Plus
Dsec\GM13839-PA 448 GM13839-PA 154..433 262..543 448 36.1 Plus
Dsec\GM14770-PA 676 GM14770-PA 7..459 6..426 438 30 Plus
Dsec\GM13839-PA 448 GM13839-PA 341..430 641..730 201 42.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:21:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13138-PA 845 GD13138-PA 1..845 1..845 4528 98.9 Plus
Dsim\GD13140-PA 863 GD13140-PA 6..863 3..845 2711 63 Plus
Dsim\GD13139-PA 774 GD13139-PA 1..774 1..845 2661 64.2 Plus
Dsim\GD13947-PA 682 GD13947-PA 97..678 186..837 1412 44.5 Plus
Dsim\GD13947-PA 682 GD13947-PA 7..619 6..546 543 29.4 Plus
Dsim\GD13125-PA 406 GD13125-PA 158..391 288..543 371 35.5 Plus
Dsim\GD13125-PA 406 GD13125-PA 299..388 641..730 203 42.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:21:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12005-PA 833 GJ12005-PA 1..833 1..845 3348 79.2 Plus
Dvir\GJ12011-PA 865 GJ12011-PA 1..865 1..845 2842 65.4 Plus
Dvir\GJ12006-PA 782 GJ12006-PA 1..782 1..845 2374 59.5 Plus
Dvir\GJ12010-PA 712 GJ12010-PA 1..712 84..845 2054 62.1 Plus
Dvir\GJ12007-PA 702 GJ12007-PA 1..702 84..845 2005 58.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:21:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17259-PA 857 GK17259-PA 1..857 1..845 3231 77.8 Plus
Dwil\GK16908-PA 825 GK16908-PA 1..825 1..845 2688 64.7 Plus
Dwil\GK16909-PA 893 GK16909-PA 1..893 1..845 2539 60.3 Plus
Dwil\GK16907-PA 784 GK16907-PA 7..784 6..845 2281 58.8 Plus
Dwil\GK16929-PA 751 GK16929-PA 211..735 260..825 1503 50.9 Plus
Dwil\GK16929-PA 751 GK16929-PA 4..174 2..158 258 40.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:21:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20496-PA 845 GE20496-PA 1..845 1..845 4507 98.7 Plus
Dyak\GE20498-PA 863 GE20498-PA 6..863 3..845 2807 63.5 Plus
Dyak\GE20497-PA 773 GE20497-PA 1..773 1..845 2702 65.1 Plus
Dyak\GE21551-PA 708 GE21551-PA 167..697 248..830 1583 53.3 Plus
Dyak\GE20482-PA 448 GE20482-PA 171..430 280..540 444 37.1 Plus
Dyak\GE21551-PA 708 GE21551-PA 8..187 7..202 400 43.4 Plus
Dyak\GE20482-PA 448 GE20482-PA 341..430 641..730 206 42.2 Plus
Dyak\GE20482-PA 448 GE20482-PA 299..434 283..431 159 34.2 Plus

RE29310.hyp Sequence

Translation from 141 to 2678

> RE29310.hyp
MNEGRQYSIHSLCRICLNHLQNDAAYDLYLVPGLSKKLCFCTSLSVEQND
GFPKNLCTLCYTKLNELHDFQKQCVDSVQKFQDLVASNVFACQSSFDVFD
PNVAVQDYPAEEEDHVNYDPLLNHKMELIENEEDVFKMLEHVDKEAEEVE
KEAKVEEDDGGNVSVKMFDDDSSIESGNDNDHDLDFEPNSSDDDIPLAQR
MRGPATGSGPQQDRFSNLDKPKPRPRGRPKKIKPPPPEEEELSDSSSESD
DSEDGTSRGDKPKRKRIPIEERHLHRIIDCHICHQKFKKAIRYEEHMKYH
NDLLPFQCKVETCKKGFTTANGLRIHIDHAHTELSEVHACIAEGCGKTFP
RVRLLTFHMKKVHGITKAAAPLRDFPCTECDTVFRCPTALKKHMYKHTGE
ELPYPCNICGKRFVINSALRDHLMRHAGIKNHVCPYCGVGKTTRQEWNAH
ILTHTKEKKFKCRQCDHASHNKQALSNHVKVVHEKRKDFACQYCGKTFGK
SHACKVHERSHTGEKCCECKICGKIFLCEKSLTKHLKTHEKRDLPPAEPL
RQQLNIPMPGQMSVPMPGQMPMQMQTDGLVPMDPNQMPSEDMLKACGGGT
AAVPPKPKNSRRVQRVDISQLAGTAVNPIPSVSVPSWSPQVNFTKKEGQH
ICPGCGRGFNNIGNMKLHYKIIHEKVKDFACRFCPKRFSKAQILRHHEWI
HTGEKPFECKICGKHFRQETALKKHIKTHEKPNRRHVPERSAPTQITFRK
LEPDAEPRNFDQYQDPAVERAAATAELLAHQLEENEAKRKAEIERQKIAA
AACEQLTKLQQQQEIIKATTSYDGYYAQKAQSEGTSLDALKIDHV*

RE29310.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
D19A-PA 845 CG10269-PA 1..845 1..845 4611 100 Plus
D19B-PA 774 CG10270-PA 1..774 1..845 2928 66 Plus
CG10274-PB 863 CG10274-PB 6..863 3..845 2891 62.9 Plus
CG7386-PA 662 CG7386-PA 4..661 6..823 1649 41.7 Plus
CG10147-PB 448 CG10147-PB 154..433 262..543 516 36.1 Plus