Clone RE29416 Report

Search the DGRC for RE29416

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:294
Well:16
Vector:pFlc-1
Associated Gene/Transcriptmas-RB
Protein status:RE29416.pep: gold
Preliminary Size:3666
Sequenced Size:3672

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15002 2002-10-04 Blastp of sequenced clone
CG15002 2003-01-01 Sim4 clustering to Release 3
mas 2008-04-29 Release 5.5 accounting
mas 2008-08-15 Release 5.9 accounting
mas 2008-12-18 5.12 accounting

Clone Sequence Records

RE29416.complete Sequence

3672 bp (3672 high quality bases) assembled on 2002-10-04

GenBank Submission: BT001597

> RE29416.complete
AGTCGGCTTTTGGCTTTCGCAAGGTGCAGTCGCGTCGTGATCGCATCCTC
CAGATACTATATATACAGATACTATATATATATACACACAAAAGAGATAC
CGAGGATCGTTCTAATTTAAACAGAAACCTTTATTCTTGGTAAGAAATGA
ACACGTGCTGACCATTTTGGACCAACGAATTATGCCAAGACATTCGAGCA
CAATGAGCCGCCTTGTTCTGCCCCTGATCTTCAGCATTTTGCTGGTCAGT
AAGCCATCGCCATCACAGGCTCAGGATGAATCCCTGGCTGGCAGTTTCCT
ATCAGGTCTTTTGGACACCATAACGAGCACCGCAGACTCCAAGGATTGCC
CTGGAGTATGTGTCCACACTTTGGCAACTTTAATTTGCTACGAAGTTCTA
GACGATGTGGCTTGTCCTTCGCCCAGCATGAAATGCTGCATAGAAAATGC
TCCAGCCGGCAAGAATGCCACTGCTGTGAGAGCAACCACAACGCCTAAAA
CCACAACCACTGCTAGCACCACTACCACCCAGAGAACCACCACCACGGTG
GCCACTACTAGCACCACAAAGAGAACCACCACAACGAGCACCACTCCAAA
ACCAAAACCAAAGCCACAGACCAAGCGACCTGCCACTAGCTCCACCACAA
AAGCCACTGTGGCCACCACAAAGAAACCGAGCACCACCAAGAAAGTGGCT
ACGGCCAAACCCAAGGACAAGGAGGAGGCCACCAAGGCCGATGATGCAAA
CAAAGACTGCACTGGAGTTTGCGTGGCCGATCGCATAGCGGAGTACTGTG
AGGCCTATTTGACCAGCGATGGACTGTGCAAGGAAGGCACCAAGTGCTGC
GTCTCCCTGGATGAGTATTCCAATGGCAAGCTGCCCAAGGATATCTATAT
TCCAGCCAAACATATGAGCAACTTGAAGCCCAACCAGACGCTGTCCGAAA
AATCGGCTCCCGCCAAGAGTTCCAGTACGTCCACGACGTCCACTACTACC
ACCACCAGCACTACCACAACACCCGAACCGGCTAGAATAAACAACAGTTC
TCCGAAGCCCACCAAACACAAGAAGCATCCGACCACCACAACGACGGAGG
CAGCCGAGGAAGAGGAGGAGCAGGAGACGGAGGAGGATGGCGAGGAGGAG
GAGCCACCACTGAGCAACAAGCTGAAGTCCGGACAAGGTCAGGGTCAGGT
GTTGAAGGAATGCGAGGGCGAGTGCATGAATGGAATATTTGCGATCTTCT
GTGATGACATCGATTCCGATGCTTTCTGTCCCGGAGAAGAAAGCTGTTGT
GTGACTGGAGGTGCCTCGGAGGCAACACCCTCCTCCAAGGCTCCACCCAC
CAAGCCGGCCATCAAGCATGCTCCCAAGCCAGCAGCCAAGCCCGCTCGTC
CCGCGTCTCCACCGCCAGCACCACCATCTTCGACCTCTGGAGGCGGAGGA
GGTGGTGACTTCCTCTCTCAAATCATATCCTTTGCGGAGAGCACTCTGAA
CTCGCCATCTCCACCACCGCCACCACCTCAGGCTCCGATTCAGGTGCCTC
GCTGTCCAGGATTCTGTCTGCTCAACATTATGGCCGCCTTCTGCGAGAGA
CCCTCGGTGCTGGTTTCCACACCCACAACGTGTGCCAAGGGTTCGGTATG
CTGCGACAACTCAAGAGCCGGAGCTCCCAAGCCCAAGTTGCCACCACCGA
CGCCGTCGCCCACGGCCTCGCCCACTGCTCCACCATATGTCCTGCCCAAT
ACCCCGAGTCCCGATCCGCGAGAAGAATGCCCAGGATCCTGTATCGTCAG
CCTGCTCAGCTTCACTTGCTTCAAAAACGCCGAGATGACTGACTTGTTCC
GCTGCAAGCGTTCCGGCCAGATTTGCTGTGCGCCCAAGAGCAAGATCCTT
GAGAAGCAGCAGTTCCAGACGCGCAACGACACCGCCTACTACCCGGCACC
GCCGCCACCGCCCATTGGTCCACCACAGGCATATCCCCCACAGACACCAC
CCTACTCCTACATGAACAATCCACCGCCACAGGGACCTCCACCCCAGATG
GCGCCTCACCACCCCAATCCCTACCAGCCACCGCCACCGGCGCCCAACTA
CGCAGATTACTATCCAGTTTCCGGACCGGGACTACCTCCACAACCTCAGC
CACCGATGACCACGCCTCCGACGACAACTACAACCACCACGACTCCACGG
CCACATGTCTACTCCAAGTATGTGTGTGGTGTGAAGGGAACTCTGCGAAC
GGGAAGATCCCAGGCTCTATCTTTCGTCTCCTACGCCCGTGCCAAGTACG
GAGTACAGAGAACAGCTCGCCAGATGACCTCCGCCGCCGGATACTCTCCC
AACTTCAACAAATCCAATGAGAGATTGGTCCTAGGATCCGCCATTGTGCC
CATCCAGATTCACAACGACAAACTGGGTGACCTAGTGGAGTCCAGCAGTC
TACAGAGCAACCAATTACGTTCGTACCACAATCACCAAGCTCAGGCAGAT
CAGCCGGATCTGGTCTATCCGGAATACTACCAACAGAGGTCTCTTTACGG
ACTCCAGTCGAACTTCAGCGGAAGACGAAGGGCACGAGTGGTGGGAGGAG
AGGATGGCGAGAATGGAGAGTGGTGCTGGCAGGTGGCTTTGATCAATTCC
TTGAATCAATATCTATGTGGAGCTGCTTTAATCGGAACCCAGTGGGTTCT
TACCGCAGCCCATTGTGTGACCAACATTGTTCGTTCCGGAGATGCTATCT
ACGTGCGGGTTGGTGATTACGATCTAACCCGGAAATACGGCAGTCCAGGA
GCACAGACATTGCGCGTGGCCACCACCTACATCCATCACAACCACAATAG
CCAGACCCTGGACAACGATATTGCTCTCCTGAAGCTCCATGGTCAAGCGG
AGCTTCGAGATGGAGTGTGCTTGGTGTGTCTTCCTGCACGAGGAGTCAGC
CATGCGGCGGGCAAGCGATGCACGGTGACCGGATACGGATATATGGGTGA
AGCTGGTCCCATTCCCCTGCGAGTGCGTGAGGCGGAGATTCCCATTGTGA
GCGATACGGAGTGCATACGGAAGGTGAACGCCGTGACGGAGAAGATCTTC
ATCCTGCCCGCCTCCAGTTTCTGTGCCGGCGGAGAGGAGGGACACGATGC
CTGCCAGGGCGATGGAGGTGGTCCACTAGTTTGCCAAGATGATGGGTTCT
ACGAGCTGGCCGGCCTCGTCTCCTGGGGATTCGGCTGCGGGCGACAGGAT
GTGCCCGGCGTCTATGTGAAGACGTCCTCGTTCATCGGCTGGATCAACCA
GATCATCAGCGTGAATAACTTATAGTGAGGAATCTCGCAAAGGACACACT
GACACCATGTGCGGGAGGAACCCCGCTCTTGTGGCGATTTCCAGGACTGA
CGACTAGCCTGGTGTAGCCTACGATTGTTTCCAGGGGTTCCCGCTCTTCG
ACTGCTAACGTAACTCCATCCTAGTGTAATCTATTCATACCTAAACCTAA
CTCTAATGACTCCAAATCCAGAAAGCAACTATATTAACTATTATGATTAT
CGGTAGCGTAGACGGCAATCTTTAAAAGTATTCCCCTATTTGATAACGCC
CTATGGTAAAATGTTTTTGTATATACAAAATAAATACAAAAAATCTTCAG
TTATACAAAAAAAAAAAAAAAA

RE29416.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:40:19
Subject Length Description Subject Range Query Range Score Percent Strand
mas-RB 3729 mas-RB 26..3684 1..3659 18280 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:52:04
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 4163056..4163970 1823..909 4575 100 Minus
chr3L 24539361 chr3L 4162099..4162999 2724..1824 4505 100 Minus
chr3L 24539361 chr3L 4161051..4161706 3655..3000 3280 100 Minus
chr3L 24539361 chr3L 4164271..4164569 752..454 1495 100 Minus
chr3L 24539361 chr3L 4161763..4162044 3002..2721 1395 99.6 Minus
chr3L 24539361 chr3L 4164849..4165023 307..133 875 100 Minus
chr3L 24539361 chr3L 4164030..4164185 908..753 780 100 Minus
chr3L 24539361 chr3L 4164629..4164780 455..304 760 100 Minus
chr3L 24539361 chr3L 4166716..4166847 132..1 660 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:47:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:52:02
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4163670..4164584 1823..909 4575 100 Minus
3L 28110227 3L 4162713..4163613 2724..1824 4505 100 Minus
3L 28110227 3L 4161661..4162320 3659..3000 3285 99.8 Minus
3L 28110227 3L 4164885..4165183 752..454 1495 100 Minus
3L 28110227 3L 4162377..4162658 3002..2721 1395 99.6 Minus
3L 28110227 3L 4165463..4165637 307..133 875 100 Minus
3L 28110227 3L 4164644..4164799 908..753 780 100 Minus
3L 28110227 3L 4165243..4165394 455..304 760 100 Minus
3L 28110227 3L 4167330..4167461 132..1 660 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:13:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 4163670..4164584 1823..909 4575 100 Minus
3L 28103327 3L 4162713..4163613 2724..1824 4505 100 Minus
3L 28103327 3L 4161661..4162320 3659..3000 3285 99.8 Minus
3L 28103327 3L 4164885..4165183 752..454 1495 100 Minus
3L 28103327 3L 4162377..4162658 3002..2721 1395 99.6 Minus
3L 28103327 3L 4165463..4165637 307..133 875 100 Minus
3L 28103327 3L 4164644..4164799 908..753 780 100 Minus
3L 28103327 3L 4165243..4165394 455..304 760 100 Minus
3L 28103327 3L 4167330..4167461 132..1 660 100 Minus
Blast to na_te.dros performed on 2019-03-16 01:52:02 has no hits.

RE29416.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:53:06 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 4161763..4162040 2725..3002 100 <- Minus
chr3L 4161050..4161703 3003..3656 99 <- Minus
chr3L 4162099..4162999 1824..2724 100 <- Minus
chr3L 4163056..4163970 909..1823 94 <- Minus
chr3L 4164030..4164185 753..908 100 <- Minus
chr3L 4164271..4164353 670..752 100 == Minus
chr3L 4164524..4164567 456..499 100 <- Minus
chr3L 4164629..4164778 306..455 100 <- Minus
chr3L 4164851..4165023 133..305 100 <- Minus
chr3L 4166716..4166847 1..132 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:07:50 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
mas-RB 1..3144 182..3325 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:12:42 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
mas-RB 1..3144 182..3325 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:10:15 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
mas-RB 1..3144 182..3325 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:03:34 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
mas-RB 1..3144 182..3325 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:43:38 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
mas-RB 1..3144 182..3325 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:35:03 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
mas-RB 1..3655 1..3656 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:12:41 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
mas-RB 1..3655 1..3656 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:10:15 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
mas-RB 4..3657 1..3654 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:03:34 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
mas-RB 1..3655 1..3656 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:43:38 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
mas-RB 4..3657 1..3654 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:53:06 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4161664..4162317 3003..3656 99 <- Minus
3L 4162377..4162654 2725..3002 100 <- Minus
3L 4162713..4163613 1824..2724 100 <- Minus
3L 4163670..4164584 909..1823 100 <- Minus
3L 4164644..4164799 753..908 100 <- Minus
3L 4164885..4165181 456..752 100 <- Minus
3L 4165243..4165392 306..455 100 <- Minus
3L 4165465..4165637 133..305 100 <- Minus
3L 4167330..4167461 1..132 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:53:06 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4161664..4162317 3003..3656 99 <- Minus
3L 4162377..4162654 2725..3002 100 <- Minus
3L 4162713..4163613 1824..2724 100 <- Minus
3L 4163670..4164584 909..1823 100 <- Minus
3L 4164644..4164799 753..908 100 <- Minus
3L 4164885..4165181 456..752 100 <- Minus
3L 4165243..4165392 306..455 100 <- Minus
3L 4165465..4165637 133..305 100 <- Minus
3L 4167330..4167461 1..132 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:53:06 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4161664..4162317 3003..3656 99 <- Minus
3L 4162377..4162654 2725..3002 100 <- Minus
3L 4162713..4163613 1824..2724 100 <- Minus
3L 4163670..4164584 909..1823 100 <- Minus
3L 4164644..4164799 753..908 100 <- Minus
3L 4164885..4165181 456..752 100 <- Minus
3L 4165243..4165392 306..455 100 <- Minus
3L 4165465..4165637 133..305 100 <- Minus
3L 4167330..4167461 1..132 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:10:15 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4161664..4162317 3003..3656 99 <- Minus
arm_3L 4162377..4162654 2725..3002 100 <- Minus
arm_3L 4162713..4163613 1824..2724 100 <- Minus
arm_3L 4163670..4164584 909..1823 100 <- Minus
arm_3L 4164644..4164799 753..908 100 <- Minus
arm_3L 4164885..4165181 456..752 100 <- Minus
arm_3L 4165243..4165392 306..455 100 <- Minus
arm_3L 4165465..4165637 133..305 100 <- Minus
arm_3L 4167330..4167461 1..132 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:35:22 Download gff for RE29416.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4165465..4165637 133..305 100 <- Minus
3L 4167330..4167461 1..132 100   Minus
3L 4161664..4162317 3003..3656 99 <- Minus
3L 4162377..4162654 2725..3002 100 <- Minus
3L 4162713..4163613 1824..2724 100 <- Minus
3L 4163670..4164584 909..1823 100 <- Minus
3L 4164644..4164799 753..908 100 <- Minus
3L 4164885..4165181 456..752 100 <- Minus
3L 4165243..4165392 306..455 100 <- Minus

RE29416.pep Sequence

Translation from 181 to 3324

> RE29416.pep
MPRHSSTMSRLVLPLIFSILLVSKPSPSQAQDESLAGSFLSGLLDTITST
ADSKDCPGVCVHTLATLICYEVLDDVACPSPSMKCCIENAPAGKNATAVR
ATTTPKTTTTASTTTTQRTTTTVATTSTTKRTTTTSTTPKPKPKPQTKRP
ATSSTTKATVATTKKPSTTKKVATAKPKDKEEATKADDANKDCTGVCVAD
RIAEYCEAYLTSDGLCKEGTKCCVSLDEYSNGKLPKDIYIPAKHMSNLKP
NQTLSEKSAPAKSSSTSTTSTTTTTSTTTTPEPARINNSSPKPTKHKKHP
TTTTTEAAEEEEEQETEEDGEEEEPPLSNKLKSGQGQGQVLKECEGECMN
GIFAIFCDDIDSDAFCPGEESCCVTGGASEATPSSKAPPTKPAIKHAPKP
AAKPARPASPPPAPPSSTSGGGGGGDFLSQIISFAESTLNSPSPPPPPPQ
APIQVPRCPGFCLLNIMAAFCERPSVLVSTPTTCAKGSVCCDNSRAGAPK
PKLPPPTPSPTASPTAPPYVLPNTPSPDPREECPGSCIVSLLSFTCFKNA
EMTDLFRCKRSGQICCAPKSKILEKQQFQTRNDTAYYPAPPPPPIGPPQA
YPPQTPPYSYMNNPPPQGPPPQMAPHHPNPYQPPPPAPNYADYYPVSGPG
LPPQPQPPMTTPPTTTTTTTTPRPHVYSKYVCGVKGTLRTGRSQALSFVS
YARAKYGVQRTARQMTSAAGYSPNFNKSNERLVLGSAIVPIQIHNDKLGD
LVESSSLQSNQLRSYHNHQAQADQPDLVYPEYYQQRSLYGLQSNFSGRRR
ARVVGGEDGENGEWCWQVALINSLNQYLCGAALIGTQWVLTAAHCVTNIV
RSGDAIYVRVGDYDLTRKYGSPGAQTLRVATTYIHHNHNSQTLDNDIALL
KLHGQAELRDGVCLVCLPARGVSHAAGKRCTVTGYGYMGEAGPIPLRVRE
AEIPIVSDTECIRKVNAVTEKIFILPASSFCAGGEEGHDACQGDGGGPLV
CQDDGFYELAGLVSWGFGCGRQDVPGVYVKTSSFIGWINQIISVNNL*

RE29416.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:30:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23883-PA 1012 GF23883-PA 3..1012 41..1047 3761 87.7 Plus
Dana\GF16836-PA 400 GF16836-PA 147..400 797..1044 407 36.3 Plus
Dana\GF16156-PA 964 GF16156-PA 716..959 798..1038 407 37.1 Plus
Dana\GF12723-PA 250 GF12723-PA 6..248 802..1042 403 36.8 Plus
Dana\GF24017-PA 720 GF24017-PA 462..714 790..1045 390 32.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14215-PA 1043 GG14215-PA 1..1043 8..1047 5348 96.9 Plus
Dere\GG15993-PA 1188 GG15993-PA 930..1183 793..1041 434 37.7 Plus
Dere\GG17425-PA 405 GG17425-PA 172..405 812..1044 402 37.2 Plus
Dere\GG10599-PA 250 GG10599-PA 6..248 802..1042 401 36.5 Plus
Dere\GG10601-PA 1637 GG10601-PA 1389..1636 799..1044 398 33.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:30:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15552-PA 1055 GH15552-PA 2..1055 5..1047 3370 74.9 Plus
Dgri\GH18766-PA 742 GH18766-PA 494..737 798..1038 407 37.5 Plus
Dgri\GH19012-PA 424 GH19012-PA 191..424 812..1044 405 36.4 Plus
Dgri\GH20265-PA 250 GH20265-PA 6..248 802..1042 402 36.5 Plus
Dgri\GH20262-PA 564 GH20262-PA 314..559 799..1043 384 36 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:15:00
Subject Length Description Subject Range Query Range Score Percent Strand
mas-PB 1047 CG15002-PB 1..1047 1..1047 5630 100 Plus
mas-PC 1046 CG15002-PC 1..1046 1..1047 5608 99.8 Plus
Np-PB 1041 CG34350-PB 154..1039 101..1042 503 24.2 Plus
Np-PA 1041 CG34350-PA 154..1039 101..1042 503 24.2 Plus
Sb-PB 787 CG4316-PB 340..782 580..1038 455 30.3 Plus
Sb-PA 787 CG4316-PA 340..782 580..1038 455 30.3 Plus
CG4998-PA 891 CG4998-PA 633..886 793..1041 424 37.7 Plus
CG4998-PB 1185 CG4998-PB 927..1180 793..1041 424 37.7 Plus
CG13318-PA 405 CG13318-PA 172..405 812..1044 398 36.8 Plus
CG10663-PD 748 CG10663-PD 446..740 755..1043 396 30.8 Plus
CG10663-PB 748 CG10663-PB 446..740 755..1043 396 30.8 Plus
CG8172-PD 371 CG8172-PD 122..370 799..1046 391 35.2 Plus
CG8172-PE 545 CG8172-PE 296..544 799..1046 391 35.2 Plus
CG8172-PF 561 CG8172-PF 312..560 799..1046 391 35.2 Plus
CG18735-PA 364 CG18735-PA 80..311 800..1038 375 38.4 Plus
lint-PB 1674 CG8213-PB 1426..1673 799..1044 364 33.6 Plus
lint-PC 1693 CG8213-PC 1445..1692 799..1044 364 33.6 Plus
CG5390-PB 406 CG5390-PB 153..396 807..1044 362 34.4 Plus
CG5390-PA 406 CG5390-PA 153..396 807..1044 362 34.4 Plus
CG3355-PA 314 CG3355-PA 17..304 756..1040 357 32.9 Plus
CG11836-PI 281 CG11836-PI 22..270 781..1038 352 34.6 Plus
CG11836-PJ 333 CG11836-PJ 74..322 781..1038 352 34.6 Plus
l(2)k05911-PC 639 CG31728-PC 399..634 802..1038 350 35.1 Plus
teq-PD 1450 CG4821-PD 1201..1444 799..1043 350 34.9 Plus
teq-PF 2379 CG4821-PF 2130..2373 799..1043 350 34.9 Plus
teq-PG 2792 CG4821-PG 2543..2786 799..1043 350 34.9 Plus
CG4386-PA 372 CG4386-PA 126..357 802..1041 346 34.7 Plus
SPH93-PA 494 CG6639-PA 236..484 793..1040 345 33.5 Plus
CG32260-PC 395 CG32260-PC 141..393 796..1043 343 34 Plus
CG32260-PA 575 CG32260-PA 321..573 796..1043 343 34 Plus
CG9372-PA 408 CG9372-PA 148..402 770..1038 342 31.2 Plus
CG40160-PH 421 CG40160-PH 154..412 786..1045 340 34 Plus
CG40160-PG 421 CG40160-PG 154..412 786..1045 340 34 Plus
CG40160-PF 421 CG40160-PF 154..412 786..1045 340 34 Plus
CG40160-PE 421 CG40160-PE 154..412 786..1045 340 34 Plus
CG40160-PD 421 CG40160-PD 154..412 786..1045 340 34 Plus
CG40160-PA 421 CG40160-PA 154..412 786..1045 340 34 Plus
CG8738-PA 459 CG8738-PA 202..449 805..1043 339 34.4 Plus
CG4914-PA 374 CG4914-PA 126..360 801..1038 336 33.6 Plus
CG8586-PC 444 CG8586-PC 197..434 812..1042 335 35.3 Plus
CG8586-PB 444 CG8586-PB 197..434 812..1042 335 35.3 Plus
CG8586-PA 444 CG8586-PA 197..434 812..1042 335 35.3 Plus
CG7432-PB 721 CG7432-PB 474..715 802..1038 335 34.5 Plus
CG11836-PF 223 CG11836-PF 9..212 826..1038 332 37.9 Plus
CG11836-PE 223 CG11836-PE 9..212 826..1038 332 37.9 Plus
CG11836-PG 223 CG11836-PG 9..212 826..1038 332 37.9 Plus
CG11836-PC 223 CG11836-PC 9..212 826..1038 332 37.9 Plus
CG11836-PA 223 CG11836-PA 9..212 826..1038 332 37.9 Plus
CG11836-PB 223 CG11836-PB 9..212 826..1038 332 37.9 Plus
CG31954-PA 277 CG31954-PA 29..273 784..1040 322 34.1 Plus
CG11192-PB 279 CG11192-PB 27..261 802..1040 320 34.7 Plus
Np-PB 1041 CG34350-PB 319..686 81..457 193 24.9 Plus
Np-PA 1041 CG34350-PA 319..686 81..457 193 24.9 Plus
Np-PB 1041 CG34350-PB 502..701 95..308 185 31.8 Plus
Np-PA 1041 CG34350-PA 502..701 95..308 185 31.8 Plus
Np-PB 1041 CG34350-PB 510..776 79..307 169 27.5 Plus
Np-PA 1041 CG34350-PA 510..776 79..307 169 27.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 03:30:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16827-PA 1055 GI16827-PA 26..1055 30..1047 3267 75.9 Plus
Dmoj\GI22656-PA 729 GI22656-PA 481..724 798..1038 404 37.1 Plus
Dmoj\GI19433-PA 250 GI19433-PA 6..248 802..1042 397 36.5 Plus
Dmoj\GI23068-PA 387 GI23068-PA 154..387 812..1044 395 37.2 Plus
Dmoj\GI19467-PA 398 GI19467-PA 145..391 807..1047 393 36 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:30:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12735-PA 1077 GL12735-PA 27..1077 27..1047 3660 81.2 Plus
Dper\GL17747-PA 996 GL17747-PA 744..994 797..1042 447 36.1 Plus
Dper\GL12130-PA 403 GL12130-PA 148..403 797..1044 415 36.3 Plus
Dper\GL12221-PA 628 GL12221-PA 380..623 798..1038 397 37.5 Plus
Dper\GL17746-PA 567 GL17746-PA 318..566 799..1046 393 36.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:30:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13420-PA 1081 GA13420-PA 27..1081 27..1047 3679 81.7 Plus
Dpse\GA24897-PB 1090 GA24897-PB 838..1088 797..1042 449 36.2 Plus
Dpse\GA12199-PA 403 GA12199-PA 148..403 797..1044 415 36.3 Plus
Dpse\GA20865-PA 567 GA20865-PA 318..566 799..1046 396 36.4 Plus
Dpse\GA20865-PC 381 GA20865-PC 132..380 799..1046 384 36.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:31:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14007-PA 830 GM14007-PA 331..830 548..1047 2429 99 Plus
Dsec\GM14007-PA 830 GM14007-PA 1..330 8..337 978 97 Plus
Dsec\GM25625-PA 1179 GM25625-PA 921..1174 793..1041 437 37.7 Plus
Dsec\GM24286-PA 778 GM24286-PA 530..773 798..1038 400 36.7 Plus
Dsec\GM26314-PA 405 GM26314-PA 172..405 812..1044 394 36.8 Plus
Dsec\GM20644-PA 250 GM20644-PA 6..248 802..1042 391 36.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:31:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13288-PA 942 GD13288-PA 13..942 118..1047 4882 98.7 Plus
Dsim\GD14629-PA 1185 GD14629-PA 927..1180 793..1041 437 37.7 Plus
Dsim\GD19075-PA 772 GD19075-PA 524..767 798..1038 404 37.1 Plus
Dsim\GD10118-PA 250 GD10118-PA 6..248 802..1042 399 36.5 Plus
Dsim\GD20845-PA 405 GD20845-PA 172..405 812..1044 388 36.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 03:31:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12575-PA 1047 GJ12575-PA 3..1047 12..1047 3304 71.6 Plus
Dvir\GJ21186-PA 1024 GJ21186-PA 772..1022 797..1042 442 36.2 Plus
Dvir\GJ24580-PA 396 GJ24580-PA 163..396 812..1044 417 38.1 Plus
Dvir\GJ23384-PA 724 GJ23384-PA 476..719 798..1038 409 37.5 Plus
Dvir\GJ21185-PA 560 GJ21185-PA 310..558 799..1046 391 36.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:31:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10062-PA 1073 GK10062-PA 666..1073 640..1047 1864 89.3 Plus
Dwil\GK13263-PA 798 GK13263-PA 549..793 797..1038 409 36.9 Plus
Dwil\GK15653-PA 375 GK15653-PA 92..321 802..1038 401 39.2 Plus
Dwil\GK17815-PA 250 GK17815-PA 6..248 802..1042 395 36.1 Plus
Dwil\GK11266-PA 405 GK11266-PA 172..404 812..1043 393 36.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:31:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20643-PA 1053 GE20643-PA 1..1053 8..1047 5372 96.6 Plus
Dyak\GE19558-PA 1188 GE19558-PA 930..1183 793..1041 436 37.7 Plus
Dyak\GE24370-PA 800 GE24370-PA 552..795 798..1038 405 37.1 Plus
Dyak\GE24826-PA 405 GE24826-PA 172..405 812..1044 401 36.8 Plus
Dyak\GE22674-PA 250 GE22674-PA 6..248 802..1042 399 36.5 Plus

RE29416.hyp Sequence

Translation from 181 to 3324

> RE29416.hyp
MPRHSSTMSRLVLPLIFSILLVSKPSPSQAQDESLAGSFLSGLLDTITST
ADSKDCPGVCVHTLATLICYEVLDDVACPSPSMKCCIENAPAGKNATAVR
ATTTPKTTTTASTTTTQRTTTTVATTSTTKRTTTTSTTPKPKPKPQTKRP
ATSSTTKATVATTKKPSTTKKVATAKPKDKEEATKADDANKDCTGVCVAD
RIAEYCEAYLTSDGLCKEGTKCCVSLDEYSNGKLPKDIYIPAKHMSNLKP
NQTLSEKSAPAKSSSTSTTSTTTTTSTTTTPEPARINNSSPKPTKHKKHP
TTTTTEAAEEEEEQETEEDGEEEEPPLSNKLKSGQGQGQVLKECEGECMN
GIFAIFCDDIDSDAFCPGEESCCVTGGASEATPSSKAPPTKPAIKHAPKP
AAKPARPASPPPAPPSSTSGGGGGGDFLSQIISFAESTLNSPSPPPPPPQ
APIQVPRCPGFCLLNIMAAFCERPSVLVSTPTTCAKGSVCCDNSRAGAPK
PKLPPPTPSPTASPTAPPYVLPNTPSPDPREECPGSCIVSLLSFTCFKNA
EMTDLFRCKRSGQICCAPKSKILEKQQFQTRNDTAYYPAPPPPPIGPPQA
YPPQTPPYSYMNNPPPQGPPPQMAPHHPNPYQPPPPAPNYADYYPVSGPG
LPPQPQPPMTTPPTTTTTTTTPRPHVYSKYVCGVKGTLRTGRSQALSFVS
YARAKYGVQRTARQMTSAAGYSPNFNKSNERLVLGSAIVPIQIHNDKLGD
LVESSSLQSNQLRSYHNHQAQADQPDLVYPEYYQQRSLYGLQSNFSGRRR
ARVVGGEDGENGEWCWQVALINSLNQYLCGAALIGTQWVLTAAHCVTNIV
RSGDAIYVRVGDYDLTRKYGSPGAQTLRVATTYIHHNHNSQTLDNDIALL
KLHGQAELRDGVCLVCLPARGVSHAAGKRCTVTGYGYMGEAGPIPLRVRE
AEIPIVSDTECIRKVNAVTEKIFILPASSFCAGGEEGHDACQGDGGGPLV
CQDDGFYELAGLVSWGFGCGRQDVPGVYVKTSSFIGWINQIISVNNL*

RE29416.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:26
Subject Length Description Subject Range Query Range Score Percent Strand
mas-PB 1047 CG15002-PB 1..1047 1..1047 5630 100 Plus
mas-PC 1046 CG15002-PC 1..1046 1..1047 5608 99.8 Plus
Np-PB 1041 CG34350-PB 154..1039 101..1042 503 24.2 Plus
Np-PA 1041 CG34350-PA 154..1039 101..1042 503 24.2 Plus
Sb-PB 787 CG4316-PB 340..782 580..1038 455 30.3 Plus
Np-PB 1041 CG34350-PB 319..686 81..457 193 24.9 Plus
Np-PA 1041 CG34350-PA 319..686 81..457 193 24.9 Plus
Np-PB 1041 CG34350-PB 502..701 95..308 185 31.8 Plus
Np-PA 1041 CG34350-PA 502..701 95..308 185 31.8 Plus
Np-PB 1041 CG34350-PB 510..776 79..307 169 27.5 Plus
Np-PA 1041 CG34350-PA 510..776 79..307 169 27.5 Plus