BDGP Sequence Production Resources |
Search the DGRC for RE29502
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 295 |
Well: | 2 |
Vector: | pFlc-1 |
Associated Gene/Transcript | wgn-RA |
Protein status: | RE29502.pep: gold |
Preliminary Size: | 1260 |
Sequenced Size: | 2425 |
Gene | Date | Evidence |
---|---|---|
CG6531 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6531 | 2002-05-31 | Blastp of sequenced clone |
CG6531 | 2003-01-01 | Sim4 clustering to Release 3 |
wgn | 2008-04-29 | Release 5.5 accounting |
wgn | 2008-08-15 | Release 5.9 accounting |
wgn | 2008-12-18 | 5.12 accounting |
2425 bp (2425 high quality bases) assembled on 2002-05-31
GenBank Submission: AY118385
> RE29502.complete AGTCTCTCATAGTCAGCGAATAGCTGCGTATCGCATCGCTGCGATCGAGC GCCAAAGAAAATCGAGCCGAGGAAAACGTATTTCCACTTGCCTGACCATA GATATTTTGCTGGCGCAGCTCGCACTCGCGACGGCCAATGAAAAGTGCAG TGAATGTACCATTTTTACGATTTTTTTTCCTGTTGCGCGGTTGCCAGTGC GAAAAGAAAAGTAAAGAAAAGTGCTAATTGTGCAATTGCGATTGCAATTG ATTGACAACCCGAACGATCGATCGGTCCGTCCATTCATCCATTTTCATTT TATCGCGAGGGGGCAGTGCGTTGGATCGTTAGATCATTCAAAGTCAAAGA TGCAAACATGAAGCCTGCCGCCGCCGTCGCGAATTCGAATTGAAAGGCAT TAAATAGAAGGCAGCGAAAGGCAGAGCAGCAGACGCAGATCATCGCAGAT CACCGCAGATCGCAAACAACAACCAACGAGTGGAGAAGCGAAAAAATGAT GCCGCCAAGACTGCCAGGCGGCCATGGAGGAGCCATGCGTAGTCGGAGCA GCAGCAGTGGCCACCACTTAAACACAACGTTTCACAAGCGCCGACGGAGG CGACAGCAGCACCACATCGGTGGCAGCCACATCAGCATCAGCCACGGCAG TTACCTGGCTCTGCTACTGCTGTCCACCACCTGCTCCCTGGTGGCCACCA GCGCCTCCTCTTCATCCTCCGCTGCAAACACAGACATAGCGCCACCAGAT CCACCGCCGGTCAGCCAGGTGTCCATCGCCTCCAGCTCGCCCTGCGCCCC ACAGCATTGGTGGGACTCGCAGCGAGATCGCTGCACACCGTGCACCCGCT GCCAGGGCGAGATGATACCGCTGCGACCCTGCCAGCTACACACGGACACC ATCTGCGGTTCCATATACGACCTCAAGATCGACTGGGTTGTCTTGGCCAA GACCGAACCCAACTGGAAGGAGCGCCGAAAGTCCTCCGAGTATGAGCACT TCGAGCACAATGCCCCACTGCAGCACCTGACCCACGAGCAACTGCAGCAG CTGCACGAGGAGGCGGCCGCCGCCTGGGTCCTTGACTGGCAGACTGGCGT TCTTTACGTGGCCGTGCTCACATGCCTGGTCTTCTTCTCGGTGGCCGCCT GCATCCTCATCCACCACATGCGCCAGTGGCGACGTATGGAGCGTCGCCTG GACCAGGATGTGGAGGAGCTGTCAACCAAGCTGATGGCCAAGCTGGCGGA GGTGCAGAGCCTGGACGGAGGCACCTTCTTCATCGGCAACGCGGACGCCT TGCGAGGACTGCCCGCCTCCGCAGCGACGACGCATCCAGCAACGACGCAG TCGGGAATCTTCCAGCCACAACACGTGCTGCTGCCTGAGAAACGCGGCAA GCATCAGGAGCGACGAATCCTGAAGACCCTGCAGCCCGGCAATGTCTACA TTGAGGAGAGCAACGCTGGATTGGGCGGCATGGGCGTGGGCCTGGGCGTC CGCGGCTGTTCCGGCCTGAAGGGCTGAGCCGTAGATGTGGTCAAGGGACA TACTTAAGGAGTGGCTATGCAGGCGCACGGACGCAGGACGCGGGACGAAG CGAGAATGGATCCGGAACACGATACGCAAACGGAACCGGAAACGTAAATG GATTAGAGAAAGAACTTTGTACAAACAGCCGCTTAAAAGTAGGAGGAGGA CGGAGGAAGGAAACCGAAACTATTATTATTTTTTATATTATTAATCTTAT TCTAATTATTACGACTTTTTTTTTGTCCTAATATTTAATTGAATCGTTAT GTTGACTTGTTTGTAATGCGCGGACAGTTGAGGACGCGGGCTTCCCGTTG TGTGGGAATCCCGAGCGATGCGGCAAAATGTTTTGTACATACTCGTAGAG ATGAGGCATGTGGCACCGCCCACGTATACCCACGTATATGATAGAAGCGA TTTAGATTAACAAATCTCTACTTAATGTAAATATTAAGGCGATCGAACAC GCGACCCCAAACGCAACGAACACACATCGTTGCGGAGTGGAACGAAACCA AGTAATATTGGCAACATATCAGCTTCTATATGCATGGAACGCATATAGAC GCACGTATTGTTAACATCACCCATATCCCATATCCTAGTACTAGTATCCA GAGTAAACAGTATCCTATAATCCCACCAACAACACACACGTACATACATT TAAACGAGTTAAAATATCCAACGAGAGCATTTTCCGGCTAGCTGCTACCC CGAGCTTAATCGAATTAACTGTAACAGTAATGATATAGATACAGATATAA CTACTTATAATAATGCTAATTAACGGATAACTATATCGATAGGGAGAAAT GTCTATGTCCTAAGTGCTATCAGTGTGCAACAGCAATAAAAACCTTTATG ATTATACAACAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wgn-RA | 2435 | wgn-RA | 19..2429 | 1..2411 | 12055 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 18513216..18514239 | 2410..1387 | 5090 | 99.8 | Minus |
chrX | 22417052 | chrX | 18517957..18518433 | 972..496 | 2385 | 100 | Minus |
chrX | 22417052 | chrX | 18523578..18524066 | 499..1 | 2295 | 97.8 | Minus |
chrX | 22417052 | chrX | 18517656..18517892 | 1207..971 | 1185 | 100 | Minus |
chrX | 22417052 | chrX | 18514821..18515001 | 1387..1207 | 905 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 18624041..18625065 | 2411..1387 | 5125 | 100 | Minus |
X | 23542271 | X | 18634405..18634903 | 499..1 | 2480 | 99.8 | Minus |
X | 23542271 | X | 18628775..18629251 | 972..496 | 2385 | 100 | Minus |
X | 23542271 | X | 18628474..18628710 | 1207..971 | 1185 | 100 | Minus |
X | 23542271 | X | 18625638..18625818 | 1387..1207 | 905 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 18632139..18633163 | 2411..1387 | 5125 | 100 | Minus |
X | 23527363 | X | 18642503..18643001 | 499..1 | 2480 | 99.7 | Minus |
X | 23527363 | X | 18636873..18637349 | 972..496 | 2385 | 100 | Minus |
X | 23527363 | X | 18636572..18636808 | 1207..971 | 1185 | 100 | Minus |
X | 23527363 | X | 18633736..18633916 | 1387..1207 | 905 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 18514821..18515000 | 1208..1387 | 100 | <- | Minus |
chrX | 18517656..18517890 | 973..1207 | 100 | <- | Minus |
chrX | 18513216..18514238 | 1388..2410 | 95 | <- | Minus |
chrX | 18517957..18518433 | 496..972 | 100 | <- | Minus |
chrX | 18523582..18524066 | 1..495 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wgn-RA | 1..1032 | 496..1527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wgn-RA | 1..1032 | 496..1527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wgn-RA | 1..1032 | 496..1527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wgn-RA | 1..1032 | 496..1527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wgn-RA | 1..1032 | 496..1527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wgn-RA | 1..2403 | 1..2403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wgn-RA | 1..2403 | 1..2403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wgn-RA | 6..2415 | 1..2410 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wgn-RA | 1..2403 | 1..2403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wgn-RA | 6..2415 | 1..2410 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18624042..18625064 | 1388..2410 | 100 | <- | Minus |
X | 18625638..18625817 | 1208..1387 | 100 | <- | Minus |
X | 18628474..18628708 | 973..1207 | 100 | <- | Minus |
X | 18628775..18629251 | 496..972 | 100 | <- | Minus |
X | 18634409..18634903 | 1..495 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18624042..18625064 | 1388..2410 | 100 | <- | Minus |
X | 18625638..18625817 | 1208..1387 | 100 | <- | Minus |
X | 18628474..18628708 | 973..1207 | 100 | <- | Minus |
X | 18628775..18629251 | 496..972 | 100 | <- | Minus |
X | 18634409..18634903 | 1..495 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18624042..18625064 | 1388..2410 | 100 | <- | Minus |
X | 18625638..18625817 | 1208..1387 | 100 | <- | Minus |
X | 18628474..18628708 | 973..1207 | 100 | <- | Minus |
X | 18628775..18629251 | 496..972 | 100 | <- | Minus |
X | 18634409..18634903 | 1..495 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 18519671..18519850 | 1208..1387 | 100 | <- | Minus |
arm_X | 18522507..18522741 | 973..1207 | 100 | <- | Minus |
arm_X | 18518075..18519097 | 1388..2410 | 100 | <- | Minus |
arm_X | 18522808..18523284 | 496..972 | 100 | <- | Minus |
arm_X | 18528442..18528936 | 1..495 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18632140..18633162 | 1388..2410 | 100 | <- | Minus |
X | 18633736..18633915 | 1208..1387 | 100 | <- | Minus |
X | 18636572..18636806 | 973..1207 | 100 | <- | Minus |
X | 18636873..18637349 | 496..972 | 100 | <- | Minus |
X | 18642507..18643001 | 1..495 | 100 | Minus |
Translation from 495 to 1526
> RE29502.pep MMPPRLPGGHGGAMRSRSSSSGHHLNTTFHKRRRRRQQHHIGGSHISISH GSYLALLLLSTTCSLVATSASSSSSAANTDIAPPDPPPVSQVSIASSSPC APQHWWDSQRDRCTPCTRCQGEMIPLRPCQLHTDTICGSIYDLKIDWVVL AKTEPNWKERRKSSEYEHFEHNAPLQHLTHEQLQQLHEEAAAAWVLDWQT GVLYVAVLTCLVFFSVAACILIHHMRQWRRMERRLDQDVEELSTKLMAKL AEVQSLDGGTFFIGNADALRGLPASAATTHPATTQSGIFQPQHVLLPEKR GKHQERRILKTLQPGNVYIEESNAGLGGMGVGLGVRGCSGLKG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22405-PA | 384 | GF22405-PA | 1..363 | 1..323 | 1182 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18107-PA | 347 | GG18107-PA | 1..347 | 1..343 | 1343 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12331-PA | 370 | GH12331-PA | 122..354 | 94..323 | 1026 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wgn-PA | 343 | CG6531-PA | 1..343 | 1..343 | 1833 | 100 | Plus |
wgn-PB | 267 | CG6531-PB | 1..238 | 1..238 | 1297 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27022-PA | 301 | GL27022-PA | 1..284 | 1..249 | 827 | 63.3 | Plus |
Dper\GL27023-PA | 50 | GL27023-PA | 1..50 | 287..337 | 194 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27758-PA | 371 | GA27758-PA | 1..371 | 1..337 | 1176 | 65.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22797-PA | 343 | GM22797-PA | 1..343 | 1..343 | 1805 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15625-PA | 926 | GD15625-PA | 821..926 | 238..343 | 563 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15183-PA | 354 | GJ15183-PA | 109..354 | 94..337 | 982 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24955-PA | 334 | GK24955-PA | 69..334 | 99..325 | 936 | 72.6 | Plus |
Translation from 495 to 1526
> RE29502.hyp MMPPRLPGGHGGAMRSRSSSSGHHLNTTFHKRRRRRQQHHIGGSHISISH GSYLALLLLSTTCSLVATSASSSSSAANTDIAPPDPPPVSQVSIASSSPC APQHWWDSQRDRCTPCTRCQGEMIPLRPCQLHTDTICGSIYDLKIDWVVL AKTEPNWKERRKSSEYEHFEHNAPLQHLTHEQLQQLHEEAAAAWVLDWQT GVLYVAVLTCLVFFSVAACILIHHMRQWRRMERRLDQDVEELSTKLMAKL AEVQSLDGGTFFIGNADALRGLPASAATTHPATTQSGIFQPQHVLLPEKR GKHQERRILKTLQPGNVYIEESNAGLGGMGVGLGVRGCSGLKG*