BDGP Sequence Production Resources |
Search the DGRC for RE29957
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 299 |
Well: | 57 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Fis1-RA |
Protein status: | RE29957.pep: gold |
Preliminary Size: | 450 |
Sequenced Size: | 641 |
Gene | Date | Evidence |
---|---|---|
CG17510 | 2001-12-14 | Blastp of sequenced clone |
CG17510 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17510 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17510 | 2008-04-29 | Release 5.5 accounting |
CG17510 | 2008-08-15 | Release 5.9 accounting |
CG17510 | 2008-12-18 | 5.12 accounting |
641 bp (641 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071264
> RE29957.complete AGAATGAACGGCTACTCTTGGCGTTAAATTCTCTGTATATAATTTTTGTA TTTGCTAACAACATTTGCCAAACAATGGAGGATCTTTTAAACGAAGTTGT ACCACAAGAAGATTTAGAAGTACGCATTCTGTCTGGTCCGAAGTCGGTAC ACAAATGACGTTAGAAAGGGAATTATGATTTTGGAGGAACTGGCTCGTAC GCATCCAGATGGAAGGCGTGACTATATATATTATCTTGCGTTTGGTAATG CTCGTATCAAGGAGTATACGTCTGGCTTAAAATACTGCCGAGCTTTTCTT GACATCGAGTCAAATGATCAAGTTCGCTCCCTAGAGGAATATATTAAAAA AGAAATCGATAAGGAAGTGGCAAAGGGTATGGTGGTTGCAGGCGGAGCAG CTTTAGTACTTGGCGGAATATTAGGACTTGGCATTGCTATGGCTAGAAAT AAACAAAAACGGGAGAAATAGTAACGTCACCACTATTTAAGGAAAATAAA ACATCGAAAGGTGCACATCAAGATGTTATGAAGTTTAATACTTGAAATAT GTTAATTTACTACATCAACATTCTAATTAATCTTTATGTACGGTTAAATC AATAAATTATCCAATTGTTGCTTGCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fis1.c | 687 | Fis1.c | 180..686 | 118..624 | 2535 | 100 | Plus |
Fis1-RC | 865 | Fis1-RC | 237..742 | 119..624 | 2530 | 100 | Plus |
Fis1-RE | 852 | Fis1-RE | 208..538 | 119..449 | 1655 | 100 | Plus |
Fis1-RE | 852 | Fis1-RE | 677..851 | 450..624 | 875 | 100 | Plus |
Fis1.c | 687 | Fis1.c | 1..119 | 1..119 | 595 | 100 | Plus |
Fis1-RC | 865 | Fis1-RC | 51..169 | 1..119 | 595 | 100 | Plus |
Fis1-RE | 852 | Fis1-RE | 22..140 | 1..119 | 595 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 1490960..1491134 | 624..450 | 875 | 100 | Minus |
chr2R | 21145070 | chr2R | 1491616..1491786 | 337..167 | 855 | 100 | Minus |
chr2R | 21145070 | chr2R | 1492080..1492201 | 122..1 | 610 | 100 | Minus |
chr2R | 21145070 | chr2R | 1491273..1491387 | 449..335 | 575 | 100 | Minus |
chr2R | 21145070 | chr2R | 1491840..1491889 | 169..120 | 250 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 5603587..5603761 | 624..450 | 875 | 100 | Minus |
2R | 25286936 | 2R | 5604243..5604413 | 337..167 | 855 | 100 | Minus |
2R | 25286936 | 2R | 5604707..5604828 | 122..1 | 610 | 100 | Minus |
2R | 25286936 | 2R | 5603900..5604014 | 449..335 | 575 | 100 | Minus |
2R | 25286936 | 2R | 5604467..5604516 | 169..120 | 250 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 5604786..5604960 | 624..450 | 875 | 100 | Minus |
2R | 25260384 | 2R | 5605442..5605612 | 337..167 | 855 | 100 | Minus |
2R | 25260384 | 2R | 5605906..5606027 | 122..1 | 610 | 100 | Minus |
2R | 25260384 | 2R | 5605099..5605213 | 449..335 | 575 | 100 | Minus |
2R | 25260384 | 2R | 5605666..5605715 | 169..120 | 250 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 1491273..1491385 | 337..449 | 100 | <- | Minus |
chr2R | 1491617..1491784 | 169..336 | 100 | <- | Minus |
chr2R | 1491841..1491889 | 120..168 | 100 | <- | Minus |
chr2R | 1492083..1492201 | 1..119 | 100 | Minus | |
chr2R | 1490959..1491134 | 450..625 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17510-RC | 1..47 | 75..120 | 97 | -> | Plus |
CG17510-RC | 115..465 | 121..471 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fis1-RC | 1..47 | 75..120 | 97 | -> | Plus |
Fis1-RC | 115..465 | 121..471 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fis1-RC | 1..47 | 75..120 | 97 | -> | Plus |
Fis1-RC | 115..465 | 121..471 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17510-RC | 1..47 | 75..120 | 97 | -> | Plus |
CG17510-RC | 115..465 | 121..471 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fis1-RC | 1..47 | 75..120 | 97 | -> | Plus |
Fis1-RC | 115..465 | 121..471 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17510-RA | 1..624 | 1..625 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fis1-RA | 1..624 | 1..625 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fis1-RA | 7..630 | 1..624 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17510-RA | 1..624 | 1..625 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fis1-RA | 7..630 | 1..624 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5603586..5603761 | 450..625 | 99 | <- | Minus |
2R | 5603900..5604012 | 337..449 | 100 | <- | Minus |
2R | 5604244..5604411 | 169..336 | 100 | <- | Minus |
2R | 5604468..5604516 | 120..168 | 100 | <- | Minus |
2R | 5604710..5604828 | 1..119 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5603586..5603761 | 450..625 | 99 | <- | Minus |
2R | 5603900..5604012 | 337..449 | 100 | <- | Minus |
2R | 5604244..5604411 | 169..336 | 100 | <- | Minus |
2R | 5604468..5604516 | 120..168 | 100 | <- | Minus |
2R | 5604710..5604828 | 1..119 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5603586..5603761 | 450..625 | 99 | <- | Minus |
2R | 5603900..5604012 | 337..449 | 100 | <- | Minus |
2R | 5604244..5604411 | 169..336 | 100 | <- | Minus |
2R | 5604468..5604516 | 120..168 | 100 | <- | Minus |
2R | 5604710..5604828 | 1..119 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 1491091..1491266 | 450..625 | 99 | <- | Minus |
arm_2R | 1491405..1491517 | 337..449 | 100 | <- | Minus |
arm_2R | 1491749..1491916 | 169..336 | 100 | <- | Minus |
arm_2R | 1491973..1492021 | 120..168 | 100 | <- | Minus |
arm_2R | 1492215..1492333 | 1..119 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5604785..5604960 | 450..625 | 99 | <- | Minus |
2R | 5605099..5605211 | 337..449 | 100 | <- | Minus |
2R | 5605443..5605610 | 169..336 | 100 | <- | Minus |
2R | 5605667..5605715 | 120..168 | 100 | <- | Minus |
2R | 5605909..5606027 | 1..119 | 100 | Minus |
Translation from 174 to 470
> RE29957.pep MILEELARTHPDGRRDYIYYLAFGNARIKEYTSGLKYCRAFLDIESNDQV RSLEEYIKKEIDKEVAKGMVVAGGAALVLGGILGLGIAMARNKQKREK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16209-PA | 99 | GF16209-PA | 1..98 | 1..98 | 368 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10856-PA | 98 | GG10856-PA | 1..98 | 1..98 | 490 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13566-PA | 148 | GH13566-PA | 57..147 | 1..91 | 407 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fis1-PG | 98 | CG17510-PG | 1..98 | 1..98 | 495 | 100 | Plus |
Fis1-PA | 98 | CG17510-PA | 1..98 | 1..98 | 495 | 100 | Plus |
Fis1-PC | 154 | CG17510-PC | 57..154 | 1..98 | 495 | 100 | Plus |
Fis1-PF | 92 | CG17510-PF | 1..91 | 1..91 | 459 | 100 | Plus |
Fis1-PD | 92 | CG17510-PD | 1..91 | 1..91 | 459 | 100 | Plus |
Fis1-PE | 148 | CG17510-PE | 57..147 | 1..91 | 459 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19554-PA | 154 | GI19554-PA | 57..154 | 1..98 | 392 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21150-PA | 98 | GL21150-PA | 1..98 | 1..98 | 402 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14535-PA | 154 | GA14535-PA | 57..154 | 1..98 | 402 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16506-PA | 111 | GM16506-PA | 14..111 | 1..98 | 501 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10356-PA | 115 | GD10356-PA | 18..115 | 1..98 | 501 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22057-PA | 154 | GJ22057-PA | 57..154 | 1..98 | 380 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24945-PA | 149 | GK24945-PA | 57..148 | 1..91 | 317 | 62 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11291-PA | 98 | GE11291-PA | 1..98 | 1..98 | 497 | 99 | Plus |
Translation from 174 to 470
> RE29957.hyp MILEELARTHPDGRRDYIYYLAFGNARIKEYTSGLKYCRAFLDIESNDQV RSLEEYIKKEIDKEVAKGMVVAGGAALVLGGILGLGIAMARNKQKREK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fis1-PG | 98 | CG17510-PG | 1..98 | 1..98 | 495 | 100 | Plus |
Fis1-PA | 98 | CG17510-PA | 1..98 | 1..98 | 495 | 100 | Plus |
Fis1-PC | 154 | CG17510-PC | 57..154 | 1..98 | 495 | 100 | Plus |
Fis1-PF | 92 | CG17510-PF | 1..91 | 1..91 | 459 | 100 | Plus |
Fis1-PD | 92 | CG17510-PD | 1..91 | 1..91 | 459 | 100 | Plus |