BDGP Sequence Production Resources |
Search the DGRC for RE30177
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 301 |
Well: | 77 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG16863-RA |
Protein status: | RE30177.pep: gold |
Preliminary Size: | 1995 |
Sequenced Size: | 2249 |
Gene | Date | Evidence |
---|---|---|
CG16863 | 2001-12-14 | Blastp of sequenced clone |
CG16863 | 2002-01-01 | Sim4 clustering to Release 2 |
CG16863 | 2003-01-01 | Sim4 clustering to Release 3 |
CG16863 | 2008-04-29 | Release 5.5 accounting |
CG16863 | 2008-08-15 | Release 5.9 accounting |
CG16863 | 2008-12-18 | 5.12 accounting |
2249 bp (2249 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071269
> RE30177.complete ACTAATGTAGCGTTATTTACAAAATATTCATTTTTTTCGTCGTTAATTTA TCGTTTATGCCGAATATGTCGCGTAGCAGAATATGGAAGTTCTACGACAA GTTGGATCGGAATTCCGCGCAGTGCCAGCTCTGCGAGAAAGTAATCAAGA CAAGCGGCAACACGTCCAATCTGATGAAGCACATGAAGACCCATCCGCAG ATGTAGGAAAGGCTCCTGAGTTCAAAAACCTTTCACAATGAAAATTTTCT TGAAGAAACCTCTTCGACGACGATGTGGTGGTGGAGCGGGGCATATACAA GCGGCGGGAGCAGGATGACAAGCTGCGATTCCGGGAGGTTGTTCCCTTCA AGGAAGAGAGCTCTGATTTCCACAGCGAGCTGTTGTTCAAGGCTGCCAAG GATGCGAGCGGCATTATCGAGCTGGATGATCAAGGAATGATCAAGGCGGC TGCTGAGGATCGCATCTCAACAAAGAGCGTCGGGTATGCGTGGGTCTCTC CGGAGGCCACAGTGTCCCGAACGGAGACGGTTGGCGGCGACGATATCATC GAATTCGAACCCAAGGAGGAGCTCGATGAGTCGGAGAAAAGCCCACTTCC CCAAATTCATGCTGTACCATTTGCCGGCCATGACAACTTAAAAATGGAAG AACCTCTGCCGAGCGAGAGTCCGTTTCACAAGGACATTGCCTTCTTTGTC TGCCGTGACCGCCAGTCATTGCAGATTGTGCAGGGCGAGGGATTCCAGCA CCTAGTGAAAGTACTGTGCCCCACCTACAGACCACCGAGTGCGGCGAAAC TGGAGGCCATTATCTGCAGGGAGTCGGAAGCGCAGAGGTCCAAGCTCTGC CAGCAGTTGGCCGACATCTCGACACTCAGCCTAAGTTGCTCGGTGCACAC GAATGCGGAGAGTCGAAGCTGGATGGAGCTGGTGGCCCACTTTCACGAGG GGCGGCAACGAATCTCCCGAACTCTTTCTGTGCTGCGCCTTCCCGATCTT TTCACCTCCAACGATCTGGTGGATCGCATGGACCAAGTGTGTCAGCGCTT CGACATTCCAAAGTCAAGGATCTGCTGCGTGTCGACAAGGAGCAGTCAAC TACTGGAGGATGCGGTGACATCGTTCATGGGCGCTCATCATCATGTTCCC TGCTTCGCAGACCAATTGAATTCTATTTTAGAGGAGGTGGTGCAGCGCCC AGAAATACGTCATTTGCGCGACAAGGTGCGTTCCCATGTGCAGTCCACAT TGCAGCTGAATCCCCAACTGGATTCCATACACCGACCGATTAGTGTGTAC AATATGCTAGACTTATACCTGAAACAGACTCTCGTTCAAGAGCCGCTGCC GCTTTCGACATCGGAGGTGGATTTGTGTCAGCAATTGCTGGACGTGCTGA GGCCGTTGACCAGCTCCATGCGTGAGCTAAGTCGAACACCATATCCGGCG GCCAGCACAGCCCTGCCCATTGCCCAAACTCTGATCAACGAACTGAAGCA GGAGAAGAGTGCGGAACACATGGTTGCCAGGGAAATACGCTTGTTCCTGG TTCAGCAGCTGGAGGAGATCTTCGAACGAATGGAGCGCAACTTGCACCTG GCATTGGCAAGTCTGCTGGACCCACGCTTTCGAAATATTCCCTTCCGGAG TGGGGCCCTGGTGGCCCAGTACATGACTCAACTCTATGACATGATGCAGG CGCATGTGGACAGCGGGGAGCAAGCTGTTGCAAAGCATCCGGAGAACCGT GATCACTACGATATCTGGGCGGCATTCAAATCCTTTTCGCATGGGAAGCA AAGGATTGTAAACGGCAGCAACGGTCCCGAGGCGGACGATGAGATAGCCA GATACTTTTGCGCCGGCATGAGTACCCTGCGAGCCGATCCCTTTCAGCTC TGGGAGGAACTGGCCGAAGCTCACCCCTTCCTGCACAACGTAGCACAGAG GTACCTGCACGTTCCGGCCACCGCAGAGCCGGCGGATCGGCTATTTACGG CCGAAGGAGCGGCGGTTGCGGCGCAGTACGCCAGACTAATCGAAAACAAC ATGGAAAACATACTCTTCATGGCGGAAATTCCAACGAAGGAGTGGCAGTT ATAGCGTAGTCCATAATCAATCCAAACCTAAGTTGAGCACTGTGTTTTTG TACCCCTTTTATTAACTAATTTATTAATTTACATTTACAATAATGCGAAC TATAAAATACATTTTTTAACTTTTTAGCTTCTCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16863-RA | 2372 | CG16863-RA | 58..2292 | 1..2235 | 11160 | 99.9 | Plus |
CG16863-RB | 2319 | CG16863-RB | 260..2239 | 256..2235 | 9885 | 99.9 | Plus |
CG16863.a | 2127 | CG16863.a | 208..1177 | 256..1225 | 4835 | 99.8 | Plus |
CG16863.a | 2127 | CG16863.a | 1176..2085 | 1326..2235 | 4550 | 100 | Plus |
CG16863-RB | 2319 | CG16863-RB | 58..259 | 1..202 | 1010 | 100 | Plus |
CG16863.a | 2127 | CG16863.a | 6..207 | 1..202 | 1010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13789675..13790307 | 1..633 | 99 | -> | Plus |
chr2L | 13790377..13791976 | 634..2233 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16863-RB | 1..137 | 66..202 | 100 | == | Plus |
CG16863-RB | 138..1986 | 256..2104 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16863-RB | 1..137 | 66..202 | 100 | == | Plus |
CG16863-RB | 138..1986 | 256..2104 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16863-RB | 1..137 | 66..202 | 100 | == | Plus |
CG16863-RB | 138..1986 | 256..2104 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16863-RB | 1..137 | 66..202 | 100 | == | Plus |
CG16863-RB | 138..1986 | 256..2104 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16863-RB | 1..137 | 66..202 | 100 | == | Plus |
CG16863-RB | 138..1986 | 256..2104 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16863-RA | 1..2233 | 1..2233 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16863-RA | 1..2233 | 1..2233 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16863-RA | 5..2237 | 1..2233 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16863-RA | 1..2233 | 1..2233 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16863-RA | 5..2237 | 1..2233 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13790963..13791595 | 1..633 | 99 | -> | Plus |
2L | 13791665..13793264 | 634..2233 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13790963..13791595 | 1..633 | 99 | -> | Plus |
2L | 13791665..13793264 | 634..2233 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13790963..13791595 | 1..633 | 99 | -> | Plus |
2L | 13791665..13793264 | 634..2233 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13790963..13791595 | 1..633 | 99 | -> | Plus |
arm_2L | 13791665..13793264 | 634..2233 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13790963..13791595 | 1..633 | 99 | -> | Plus |
2L | 13791665..13793264 | 634..2233 | 100 | Plus |
Translation from 436 to 2103
> RE30177.pep MIKAAAEDRISTKSVGYAWVSPEATVSRTETVGGDDIIEFEPKEELDESE KSPLPQIHAVPFAGHDNLKMEEPLPSESPFHKDIAFFVCRDRQSLQIVQG EGFQHLVKVLCPTYRPPSAAKLEAIICRESEAQRSKLCQQLADISTLSLS CSVHTNAESRSWMELVAHFHEGRQRISRTLSVLRLPDLFTSNDLVDRMDQ VCQRFDIPKSRICCVSTRSSQLLEDAVTSFMGAHHHVPCFADQLNSILEE VVQRPEIRHLRDKVRSHVQSTLQLNPQLDSIHRPISVYNMLDLYLKQTLV QEPLPLSTSEVDLCQQLLDVLRPLTSSMRELSRTPYPAASTALPIAQTLI NELKQEKSAEHMVAREIRLFLVQQLEEIFERMERNLHLALASLLDPRFRN IPFRSGALVAQYMTQLYDMMQAHVDSGEQAVAKHPENRDHYDIWAAFKSF SHGKQRIVNGSNGPEADDEIARYFCAGMSTLRADPFQLWEELAEAHPFLH NVAQRYLHVPATAEPADRLFTAEGAAVAAQYARLIENNMENILFMAEIPT KEWQL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14255-PA | 664 | GF14255-PA | 101..664 | 10..555 | 1148 | 43.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23879-PA | 666 | GG23879-PA | 107..666 | 1..555 | 2331 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11112-PA | 667 | GH11112-PA | 138..667 | 32..555 | 1117 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16863-PA | 555 | CG16863-PA | 1..555 | 1..555 | 2866 | 100 | Plus |
CG16863-PB | 661 | CG16863-PB | 107..661 | 1..555 | 2866 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18235-PA | 1157 | GI18235-PA | 603..1157 | 4..555 | 1207 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21228-PA | 670 | GL21228-PA | 129..670 | 30..555 | 1273 | 48.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14183-PA | 673 | GA14183-PA | 132..673 | 30..555 | 1286 | 48.7 | Plus |
Dpse\GA25633-PA | 534 | GA25633-PA | 27..530 | 71..545 | 234 | 19.3 | Plus |
Dpse\GA27881-PA | 175 | GA27881-PA | 5..171 | 379..545 | 146 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15203-PA | 659 | GM15203-PA | 107..659 | 1..555 | 2741 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23922-PA | 661 | GD23922-PA | 107..661 | 1..555 | 2746 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18142-PA | 683 | GJ18142-PA | 143..683 | 36..555 | 1159 | 44.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24227-PA | 604 | GK24227-PA | 57..604 | 11..553 | 882 | 37.6 | Plus |
Dwil\GK16089-PA | 467 | GK16089-PA | 1..430 | 87..486 | 160 | 20.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18680-PA | 668 | GE18680-PA | 107..668 | 1..555 | 2391 | 81.5 | Plus |
Translation from 436 to 2103
> RE30177.hyp MIKAAAEDRISTKSVGYAWVSPEATVSRTETVGGDDIIEFEPKEELDESE KSPLPQIHAVPFAGHDNLKMEEPLPSESPFHKDIAFFVCRDRQSLQIVQG EGFQHLVKVLCPTYRPPSAAKLEAIICRESEAQRSKLCQQLADISTLSLS CSVHTNAESRSWMELVAHFHEGRQRISRTLSVLRLPDLFTSNDLVDRMDQ VCQRFDIPKSRICCVSTRSSQLLEDAVTSFMGAHHHVPCFADQLNSILEE VVQRPEIRHLRDKVRSHVQSTLQLNPQLDSIHRPISVYNMLDLYLKQTLV QEPLPLSTSEVDLCQQLLDVLRPLTSSMRELSRTPYPAASTALPIAQTLI NELKQEKSAEHMVAREIRLFLVQQLEEIFERMERNLHLALASLLDPRFRN IPFRSGALVAQYMTQLYDMMQAHVDSGEQAVAKHPENRDHYDIWAAFKSF SHGKQRIVNGSNGPEADDEIARYFCAGMSTLRADPFQLWEELAEAHPFLH NVAQRYLHVPATAEPADRLFTAEGAAVAAQYARLIENNMENILFMAEIPT KEWQL*