BDGP Sequence Production Resources |
Search the DGRC for RE31024
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 310 |
Well: | 24 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG3192-RA |
Protein status: | RE31024.pep: gold |
Sequenced Size: | 703 |
Gene | Date | Evidence |
---|---|---|
CG3192-RA | 2009-01-21 | est gleaning |
CG3192 | 2009-06-08 | Manual selection by Joe Carlson |
703 bp assembled on 2009-08-28
GenBank Submission: BT099663.1
> RE31024.complete TGTTTTTTCGGGAATCGTAACTTCAGAGGAACTTTTTTTTAGTGGAAACA AGCCTGCAATGTCGGCGTTTGTGAAAACCGTGTGCTTGGCCCAAAAGCTG TGCGCCGCCAATCCCGTCGTGGCTCGCCAGGCGATCCGCAGCATGGCTGG CTGGAATAAGGACTACAAGCCGGGTCCGTATCCACAGACGGAGAAGGAGC GCCTGGCGGCGGCCAAGAAGTACTATCTGTTGCCGGAGGAGTACAAACCG TATGCGGACGATGGTCTGGGCTACGGAGATTATCCCAAATTGGGCTACGG TCTGGGTGTGGAGGCCAAGGACTCGTACTATCCCTGGGACTATCCGGAGC ACAAGCGCAACCAACACGAGCCCATCTCGGCGGATCATGATCTGTACAGC GAGGATCGCTGGTCGCAGGCCGAACCGCCACGCTACAGCAATGCGTACTA CTTTGCCTGCTTCCTGGGCGTGATGTCCGGCTGCCTGGCACTCTACTACT GGCTGGATGACAAGAAGATGTACCGCCCCGTGGCCGCCAAGCAATATCCC AGCCCTGGCGTCAAGCACTACACCTTCGAGAAGTAGGATTGTATCTATCA CGCTCTCGATCGCACTGCGCGCCTCGTTTTTATTTCATAGGCAATTAATC AACGCATCTATACAATTAAAATGAATGGAAACCAAGCAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6569434..6569747 | 687..374 | 1570 | 100 | Minus |
chrX | 22417052 | chrX | 6569824..6570053 | 373..144 | 1120 | 99.1 | Minus |
chrX | 22417052 | chrX | 6570172..6570314 | 143..1 | 685 | 98.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6569434..6569747 | 374..687 | 100 | <- | Minus |
chrX | 6569824..6570053 | 144..373 | 99 | <- | Minus |
chrX | 6570172..6570314 | 1..143 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3192-RB | 1..528 | 59..586 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3192-RB | 1..528 | 59..586 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3192-RA | 1..528 | 59..586 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3192-RA | 1..528 | 59..586 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3192-RB | 119..805 | 1..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3192-RB | 119..805 | 1..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3192-RA | 635..1321 | 1..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3192-RA | 635..1321 | 1..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6677652..6677881 | 144..373 | 100 | <- | Minus |
X | 6678000..6678142 | 1..143 | 100 | Minus | |
X | 6677262..6677575 | 374..687 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6677652..6677881 | 144..373 | 100 | <- | Minus |
X | 6678000..6678142 | 1..143 | 100 | Minus | |
X | 6677262..6677575 | 374..687 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6677652..6677881 | 144..373 | 100 | <- | Minus |
X | 6678000..6678142 | 1..143 | 100 | Minus | |
X | 6677262..6677575 | 374..687 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6571295..6571608 | 374..687 | 100 | <- | Minus |
arm_X | 6571685..6571914 | 144..373 | 100 | <- | Minus |
arm_X | 6572033..6572175 | 1..143 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6685360..6685673 | 374..687 | 100 | <- | Minus |
X | 6685750..6685979 | 144..373 | 100 | <- | Minus |
X | 6686098..6686240 | 1..143 | 100 | Minus |
Translation from 0 to 585
> RE31024.hyp VFSGIVTSEELFFSGNKPAMSAFVKTVCLAQKLCAANPVVARQAIRSMAG WNKDYKPGPYPQTEKERLAAAKKYYLLPEEYKPYADDGLGYGDYPKLGYG LGVEAKDSYYPWDYPEHKRNQHEPISADHDLYSEDRWSQAEPPRYSNAYY FACFLGVMSGCLALYYWLDDKKMYRPVAAKQYPSPGVKHYTFEK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3192-PC | 175 | CG3192-PC | 1..175 | 20..194 | 978 | 100 | Plus |
CG3192-PB | 175 | CG3192-PB | 1..175 | 20..194 | 978 | 100 | Plus |
CG3192-PA | 175 | CG3192-PA | 1..175 | 20..194 | 978 | 100 | Plus |
Translation from 1 to 585
> RE31024.pep VFSGIVTSEELFFSGNKPAMSAFVKTVCLAQKLCAANPVVARQAIRSMAG WNKDYKPGPYPQTEKERLAAAKKYYLLPEEYKPYADDGLGYGDYPKLGYG LGVEAKDSYYPWDYPEHKRNQHEPISADHDLYSEDRWSQAEPPRYSNAYY FACFLGVMSGCLALYYWLDDKKMYRPVAAKQYPSPGVKHYTFEK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20848-PA | 177 | GF20848-PA | 1..175 | 20..194 | 850 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17665-PA | 175 | GG17665-PA | 1..175 | 20..194 | 889 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24238-PA | 175 | GH24238-PA | 1..175 | 20..194 | 715 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ND-ASHI-PC | 175 | CG3192-PC | 1..175 | 20..194 | 978 | 100 | Plus |
ND-ASHI-PB | 175 | CG3192-PB | 1..175 | 20..194 | 978 | 100 | Plus |
ND-ASHI-PA | 175 | CG3192-PA | 1..175 | 20..194 | 978 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21434-PA | 175 | GI21434-PA | 1..175 | 20..194 | 711 | 76 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13370-PA | 175 | GL13370-PA | 1..175 | 20..194 | 776 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16565-PA | 175 | GA16565-PA | 1..175 | 20..194 | 776 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12565-PA | 175 | GM12565-PA | 1..175 | 20..194 | 904 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16186-PA | 175 | GD16186-PA | 1..175 | 20..194 | 916 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16452-PA | 175 | GJ16452-PA | 1..175 | 20..194 | 741 | 77.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17672-PA | 175 | GK17672-PA | 1..175 | 20..194 | 764 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16455-PA | 175 | GE16455-PA | 1..175 | 20..194 | 895 | 96.6 | Plus |