BDGP Sequence Production Resources |
Search the DGRC for RE31086
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 310 |
Well: | 86 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG5664-RA |
Protein status: | RE31086.pep: gold |
Sequenced Size: | 2631 |
Gene | Date | Evidence |
---|---|---|
CG5664 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5664 | 2008-04-29 | Release 5.5 accounting |
CG5664 | 2008-08-15 | Release 5.9 accounting |
CG5664 | 2008-12-18 | 5.12 accounting |
2631 bp (2631 high quality bases) assembled on 2005-10-06
GenBank Submission: BT023888
> RE31086.complete AAAAAATATCCCCGGCAAAAAAAAACACAAATTGTGTTTTTAATACTTTT GATATTCTAGCGTAAATAATTGTTACGCGCTCTGATGTCCACCACAATTA ACGCCATAACGTTAGTCCTGGTCTAGAGGTTGAAAAGAATCCTGAAACCA AAGAACCTGAAGATCAGTTAGTAACCGAAGGAATTGCAATGGGTTCCAAC GGCGAAGAATTATTGAATTTCGCAATGAACTCAGACAGCGTAAATACCAT AAATTCAACAGCGGACGTCGCAGAAATTGTCTTAGACACTAATTTAGAGT TCAACAAGACGATTCCTTTTCATCTGCCTCAGGAGTCGGACGTGGAAATG GTCTCTGTCAGATCAGCTGCCGAACCTGATCCTAACAAATCAGATTCCAA AGCAAGTAATAAATCAGATTCCAAATTAGATGGTAAATCGATATTAGAGT CAGGAACCAAACCTCAGGCGGCCCCGGGGGAGGTTTTCGCTAGGAAGGCA TGCCTCAAGAGGACCAACGAATATCCTGCTCCGCTGAATCATACTCTCAA GAAACTGAACTGGAAGTTTAACCTGCGTATATTGATCTCAAATCTGTACA TGAAGAGCGAGGATCGTCTTCCGGGAGCTTGTGTTTCCAGGTGTCTTTAC AATACTAGTCTGTGCACGCAAAGACATCGGTGCTCCGCGCTTCCGGATGG CCCAAACTTTGCGGCCGTTCAGGCGCTACGAACCACGTTGCACGGCCAGC ACTACGATACATTCCTGGACATTCTGGAGATGATGGTGTTGCAGGGTGTC TACCCAGGCGAAGGAGTCTTTGACAGACTAATAGATATGGCCATGATCCT AATTGCCAAAGAGATAAGCGTAAAGGAGCTTGGCGACATCTACAACAAAC TTATACGCACCTTTTTTCTTTTGGTCGACGCCTTTCCCCCGTGCTGGACA GCCCTGCGTCCTTACTACTTGAGTTTTCTGGGCGTCTCGCATCCCCCCTT GCGAGAAACACGTTCAACCAATTCTACCCAGAAGTTGCAGTTTTACATCG ATCTTTTTGAGGAAAATCTAACGCATTGCAGCGATGAAGAGATACGTGAA AACACCAAATTCTATGAAAAGTTTGTGTTTAACTTCTCGGAAGAGGAGGA TGCGAATATGTCCCAGGAAACGGTCTTTCTGCGACATGTACAGCAGTATG ACTGGCAGAGTGGGAAGCTTTGTCTGGACGACTTCAAGAGAATGTCGCCC GCAGTCCGCTTGGCACGGCTCTGCGATGTCCTGAACATGCTCACATGTGT ACTGGAAATAGAGTTCCTCTCCTGGCTGGATCATAACAGGTTGAGGCAGT CGGAGTCGGAGCTGTTTCAGGAAAACTCCAGGTCATTTGCCTCGATCGTA TTTGAAATGTCAGCAGGAACGCGTCTCAGCGACATCGTTAAACAAATTAT GAGTCTGTATGGACAGGTAGTGGCCAAGTCCATGTACCCAGAACGCCAGA GGATTCTCCAGCGCCTTGTTTCCCTAATTGTCGAAGTAAGCAACACGGCA GAGCTAAAGTACGAGGATAATGCTGTGATATATCCTAGTATGGGACCCCA AACCCATCTGCTCATCGAAGACTTCTTCAAGATTTTTAAATCGCACAATC GCAAAAAGGTTCGCACCTACCTAATGGCTATTCGGCAGTTGGACCCCCCA TATCTCCGCTTCGAGTTCACAGACCACTTTTTGAAGCTCTTTTTCTTTCC CAAAAAAACTCATTTTGGACCGGAAAAGGTGGTCGGAGAATTTAGAGCGC GTCAATGGGTAAAGTACAATCTTAAAAGTGAGATTGAGGATGACGATGAC GAGCAGTTGTCGCGTGAGGATTACCTAGCATTACTCCTTAGCGCCTTAAA AGACTATGACAAGTGGTTAAATCTTGGAGGCTTTTGGAAGTACCTAATGA GTAAGGAGCTCGTGCAGCCGTTGACTGCGAGGATCAGTCCTGTGGGAAGA GTTGTGCGCGAGGCGCCGAAGGTGTTCAGGCTCGATGCGTTGGAGGAGGA GGTACACACCTGGAAGGAGCGCATGAGCACCAAAGTAATTACAGGTCGGG AAAAGGTGAACCTGCCGGTGGCCAGTATCAATATGGCCAAGATGTGTGTG CGCTATGGCGAGGATGTGAGACAAATGAGAGTTTTGCGACAACTCCTTCA AAACGAAGTTTACAAGGAGGTCGATGTGTCGGACTGGTTAACCTATCTGA ACAACTTTCTGAGCTATGAAGAGTCCATGTCTCCAGTAGACTCTGCGTCT TCCTCCTTATTGGGAGGCATATGAGGGCCCAAATACGAAAATATATCTAA GGCTCCATTAAATTTAAGGAATTTCATACCGAAAGTTCAAACTTAATTAT TTTAAGCCCGTTAATTAGTATTTATCTAAATGGTTTCAAATAAGAATGCA TTTGATTCGTTACCGTTTGTCATAAATTCCGTTTCTGTATTTCTCCATTG CAAATATATATTTATGCTGTAACTAAATACACAATTACGTACACATTTAC ACATAAATACAGCTACTGCGCATGTACATACATACATTAATAAATATATA TGTGTATAATTACAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5664-RA | 2727 | CG5664-RA | 26..2638 | 2..2614 | 13050 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 21427589..21428693 | 2614..1510 | 5510 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 21429473..21430316 | 845..2 | 4220 | 100 | Minus |
chr3L | 24539361 | chr3L | 21428749..21429415 | 1511..845 | 3335 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 21438629..21439733 | 2614..1510 | 5510 | 99.9 | Minus |
3L | 28110227 | 3L | 21440513..21441356 | 845..2 | 4220 | 100 | Minus |
3L | 28110227 | 3L | 21439789..21440455 | 1511..845 | 3335 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 21431729..21432833 | 2614..1510 | 5510 | 99.9 | Minus |
3L | 28103327 | 3L | 21433613..21434456 | 845..2 | 4220 | 100 | Minus |
3L | 28103327 | 3L | 21432889..21433555 | 1511..845 | 3335 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 1594..1700 | 2503..2612 | 137 | 62.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 21429473..21430316 | 1..845 | 99 | Minus | |
chr3L | 21427588..21428691 | 1512..2615 | 99 | <- | Minus |
chr3L | 21428749..21429414 | 846..1511 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5664-RA | 1..2136 | 189..2324 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5664-RA | 1..2136 | 189..2324 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5664-RA | 1..2136 | 189..2324 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5664-RA | 1..2136 | 189..2324 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5664-RA | 1..2136 | 189..2324 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5664-RA | 1..2580 | 35..2615 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5664-RA | 1..2580 | 35..2615 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5664-RA | 7..2620 | 1..2615 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5664-RA | 1..2580 | 35..2615 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5664-RA | 7..2620 | 1..2615 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21440513..21441356 | 1..845 | 99 | Minus | |
3L | 21438628..21439731 | 1512..2615 | 99 | <- | Minus |
3L | 21439789..21440454 | 846..1511 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21440513..21441356 | 1..845 | 99 | Minus | |
3L | 21438628..21439731 | 1512..2615 | 99 | <- | Minus |
3L | 21439789..21440454 | 846..1511 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21440513..21441356 | 1..845 | 99 | Minus | |
3L | 21438628..21439731 | 1512..2615 | 99 | <- | Minus |
3L | 21439789..21440454 | 846..1511 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 21431728..21432831 | 1512..2615 | 99 | <- | Minus |
arm_3L | 21432889..21433554 | 846..1511 | 100 | <- | Minus |
arm_3L | 21433613..21434456 | 1..845 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21431728..21432831 | 1512..2615 | 99 | <- | Minus |
3L | 21432889..21433554 | 846..1511 | 100 | <- | Minus |
3L | 21433613..21434456 | 1..845 | 99 | Minus |
Translation from 188 to 2323
> RE31086.pep MGSNGEELLNFAMNSDSVNTINSTADVAEIVLDTNLEFNKTIPFHLPQES DVEMVSVRSAAEPDPNKSDSKASNKSDSKLDGKSILESGTKPQAAPGEVF ARKACLKRTNEYPAPLNHTLKKLNWKFNLRILISNLYMKSEDRLPGACVS RCLYNTSLCTQRHRCSALPDGPNFAAVQALRTTLHGQHYDTFLDILEMMV LQGVYPGEGVFDRLIDMAMILIAKEISVKELGDIYNKLIRTFFLLVDAFP PCWTALRPYYLSFLGVSHPPLRETRSTNSTQKLQFYIDLFEENLTHCSDE EIRENTKFYEKFVFNFSEEEDANMSQETVFLRHVQQYDWQSGKLCLDDFK RMSPAVRLARLCDVLNMLTCVLEIEFLSWLDHNRLRQSESELFQENSRSF ASIVFEMSAGTRLSDIVKQIMSLYGQVVAKSMYPERQRILQRLVSLIVEV SNTAELKYEDNAVIYPSMGPQTHLLIEDFFKIFKSHNRKKVRTYLMAIRQ LDPPYLRFEFTDHFLKLFFFPKKTHFGPEKVVGEFRARQWVKYNLKSEIE DDDDEQLSREDYLALLLSALKDYDKWLNLGGFWKYLMSKELVQPLTARIS PVGRVVREAPKVFRLDALEEEVHTWKERMSTKVITGREKVNLPVASINMA KMCVRYGEDVRQMRVLRQLLQNEVYKEVDVSDWLTYLNNFLSYEESMSPV DSASSSLLGGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24192-PA | 726 | GF24192-PA | 64..714 | 49..698 | 2262 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13236-PA | 693 | GG13236-PA | 1..693 | 1..711 | 2881 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16415-PA | 665 | GH16415-PA | 25..660 | 56..695 | 1534 | 49.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5664-PA | 711 | CG5664-PA | 1..711 | 1..711 | 3686 | 100 | Plus |
CG5664-PB | 443 | CG5664-PB | 1..441 | 1..441 | 2289 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12496-PA | 664 | GI12496-PA | 36..659 | 63..695 | 1674 | 49.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24581-PA | 709 | GL24581-PA | 109..701 | 113..706 | 2020 | 62.9 | Plus |
Dper\GL13987-PA | 594 | GL13987-PA | 37..594 | 109..691 | 1827 | 60 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19043-PA | 709 | GA19043-PA | 109..701 | 113..706 | 2035 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22141-PA | 649 | GM22141-PA | 1..434 | 1..441 | 2017 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12119-PA | 605 | GD12119-PA | 1..441 | 1..441 | 2079 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12399-PA | 680 | GJ12399-PA | 15..666 | 48..702 | 1655 | 49.8 | Plus |
Translation from 188 to 2323
> RE31086.hyp MGSNGEELLNFAMNSDSVNTINSTADVAEIVLDTNLEFNKTIPFHLPQES DVEMVSVRSAAEPDPNKSDSKASNKSDSKLDGKSILESGTKPQAAPGEVF ARKACLKRTNEYPAPLNHTLKKLNWKFNLRILISNLYMKSEDRLPGACVS RCLYNTSLCTQRHRCSALPDGPNFAAVQALRTTLHGQHYDTFLDILEMMV LQGVYPGEGVFDRLIDMAMILIAKEISVKELGDIYNKLIRTFFLLVDAFP PCWTALRPYYLSFLGVSHPPLRETRSTNSTQKLQFYIDLFEENLTHCSDE EIRENTKFYEKFVFNFSEEEDANMSQETVFLRHVQQYDWQSGKLCLDDFK RMSPAVRLARLCDVLNMLTCVLEIEFLSWLDHNRLRQSESELFQENSRSF ASIVFEMSAGTRLSDIVKQIMSLYGQVVAKSMYPERQRILQRLVSLIVEV SNTAELKYEDNAVIYPSMGPQTHLLIEDFFKIFKSHNRKKVRTYLMAIRQ LDPPYLRFEFTDHFLKLFFFPKKTHFGPEKVVGEFRARQWVKYNLKSEIE DDDDEQLSREDYLALLLSALKDYDKWLNLGGFWKYLMSKELVQPLTARIS PVGRVVREAPKVFRLDALEEEVHTWKERMSTKVITGREKVNLPVASINMA KMCVRYGEDVRQMRVLRQLLQNEVYKEVDVSDWLTYLNNFLSYEESMSPV DSASSSLLGGI*