BDGP Sequence Production Resources |
Search the DGRC for RE31221
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 312 |
Well: | 21 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG13532-RA |
Protein status: | RE31221.pep: gold |
Preliminary Size: | 841 |
Sequenced Size: | 1829 |
Gene | Date | Evidence |
---|---|---|
CG13532 | 2001-12-14 | Blastp of sequenced clone |
CG13532 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13532 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13532 | 2008-04-29 | Release 5.5 accounting |
CG13532 | 2008-08-15 | Release 5.9 accounting |
CG13532 | 2008-12-18 | 5.12 accounting |
1829 bp (1829 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071285
> RE31221.complete GGACTCCATTCCGCACGCACACACTATCGCAGCCGTAGATGTTCGTGTAT GTGGGCTGCAAAAAGTCGATTTTTCGCTAACAAAAAGTATCCTGTCCTGT GTGGGCAAAACTTTAAATGGCCCGGGCCATAAAAGGAGATTGCCATAGTT GCGACTTGCAGTGGGAGATGTCCTGCGAGGAGCTGCTGCGTCCGAGGTGC TGAGCTCGTTGGGCCGAGAAAAGTTTGTGCCAGTCAGTGCCCGTATCCCC AGAAAAAAGCATCCCCCTGCCATTCTGCTTCTGTGATGAGATTGGTGATA ATGAGTGCAACCAAAGGCCCCCATGTATCCACATAAAAGCGCAAGCCGAA AACAGACAGCACCGCGATAAGTAGAAACGTCCAACCACCACAGAAGTATT CATTGCCACGCACAACGACGGCGCGTCCTCGCGGAACGGGAGGATCACGA GCGACAGGATCTGGAGTGCCCAGCGACGCTGAGGCAAACTAGTCGGCTGT CATGGCGGGCTGGCGAGGACGAGGCCTACGCGCCACGCTGCTGGCCGTGC TCGCGTTACTCTCGGTCACTCACTCGGTGCGCATCACCAACCTGCGGGTG CCACGCACCTACACGCTGTTCCGAGACCACGAACCCGATCCTCTGGTGCT CGACTGCGAGGTGGAGATCGGGCCGCGGGAGCAAGGATTCGTCCTCAAAT GGCTGTTCAATAACCACTCCATCTACCAGTGGATACCATCGGTCAAGGGG TTCGCCATGGGCTTCATGAAGTCGAAGATAGACACCAAAATATTCACTAT GGAGGGCAGTCCCGGTGTTATATCGATAAAGAATCCCGACTGGAACATGA CGGGGGAGTACACCTGTGCAGTGCAGACCTTCGAGTCCACGGATAAGCGG AGTGCCCGCCTGCAAATAATCGTTCCTGAATCGGATTTCATGCTGGAAGC GCGGATGAGCGGTTCGCGTATGGACGTGGACATCATGTGTGCGGTCCAGC ACGTCTTCCCGCAACCCATGCTGTCTGTCATGTTTGACACCCACATACTG GACTCGGTACTGACGCAGTTGGACCAGGACCCCAGTGGCCTCTACAGCAT GACCGTTCGCACCCGCATTCCTAGAGATCAACTCGAGTCCCCCACCCCAA TCACCTGTGCGTTTATCCTAGTTGGCACCAACTACACCAAGCGCCGGGAG ACTATTTTCTATGATAAGGCCTCAACTATACAACGCAAGTGGACAACGGT CGCCGTAGTCATGTCCATCGCATCCTTAGCTCTAAGCAGTTAGTTTGGTA GTGTCCTTTTTATGTAGGCTACATTCGTTTTTATGTTTGGACTAGGAACT TTGATACTCCTTAATTTTTAATAGACTTTTAACGGATAAACGTAATTTTT TGCGGTATTTTTAAAAAAAAGCGCTTATTTTGTACATGCATGTATTTGTA AGGATAACGAAACACAAAACAAAAACAAACACCACAATGCGTAAGCAAAC GAACCCATAAAGACAAAAAGGACAACAGTAAAGCATAACAAGAAATTCTT GTATTCATATATTTACCACATAAATAAAATATATATGATAGTTATATACG ATGTATAGGTCTAATTGAGTACAGAAACGCTAATAAAAAAAATACGAAAA GAAACATTAAAAGTGCATTAAACCAACCGCCTTCGTCGTCGTTTTTCTTT GCTAAAAAACTAAACAAATTTTAAAATTGTATTTTTATTGTAAAATTACG CTGTAGATTGGACTCAAGTCACACATATAATAAAAAAAAGTCTCAGCATG ACTAATTAAATCCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13532-RA | 2026 | CG13532-RA | 208..2023 | 1..1816 | 9080 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 18760344..18760943 | 1213..1813 | 2910 | 99.3 | Plus |
chr2R | 21145070 | chr2R | 18757815..18758379 | 1..565 | 2780 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 18758460..18758655 | 565..760 | 905 | 97.4 | Plus |
chr2R | 21145070 | chr2R | 18759972..18760158 | 1032..1218 | 905 | 98.9 | Plus |
chr2R | 21145070 | chr2R | 18758748..18758911 | 759..922 | 805 | 99.4 | Plus |
chr2R | 21145070 | chr2R | 18759784..18759895 | 922..1033 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 22873827..22874430 | 1213..1816 | 3020 | 100 | Plus |
2R | 25286936 | 2R | 22871295..22871859 | 1..565 | 2825 | 100 | Plus |
2R | 25286936 | 2R | 22871941..22872136 | 565..760 | 980 | 100 | Plus |
2R | 25286936 | 2R | 22873455..22873641 | 1032..1218 | 920 | 99.5 | Plus |
2R | 25286936 | 2R | 22872229..22872392 | 759..922 | 820 | 100 | Plus |
2R | 25286936 | 2R | 22873267..22873378 | 922..1033 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 22875026..22875629 | 1213..1816 | 3020 | 100 | Plus |
2R | 25260384 | 2R | 22872494..22873058 | 1..565 | 2825 | 100 | Plus |
2R | 25260384 | 2R | 22873140..22873335 | 565..760 | 980 | 100 | Plus |
2R | 25260384 | 2R | 22874654..22874840 | 1032..1218 | 920 | 99.4 | Plus |
2R | 25260384 | 2R | 22873428..22873591 | 759..922 | 820 | 100 | Plus |
2R | 25260384 | 2R | 22874466..22874577 | 922..1033 | 560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 18757815..18758379 | 1..565 | 99 | -> | Plus |
chr2R | 18758461..18758654 | 566..759 | 97 | -> | Plus |
chr2R | 18758749..18758911 | 760..922 | 99 | -> | Plus |
chr2R | 18759785..18759893 | 923..1031 | 100 | -> | Plus |
chr2R | 18759972..18760153 | 1032..1213 | 99 | -> | Plus |
chr2R | 18760345..18760943 | 1214..1813 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13532-RA | 1..792 | 502..1293 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13532-RA | 1..792 | 502..1293 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13532-RA | 1..792 | 502..1293 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13532-RA | 1..792 | 502..1293 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13532-RA | 1..792 | 502..1293 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13532-RA | 4..1816 | 1..1813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13532-RA | 1..1813 | 1..1813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13532-RA | 106..1918 | 1..1813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13532-RA | 4..1816 | 1..1813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13532-RA | 106..1918 | 1..1813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22872230..22872392 | 760..922 | 100 | -> | Plus |
2R | 22873455..22873636 | 1032..1213 | 100 | -> | Plus |
2R | 22873268..22873376 | 923..1031 | 100 | -> | Plus |
2R | 22871295..22871859 | 1..565 | 100 | -> | Plus |
2R | 22871942..22872135 | 566..759 | 100 | -> | Plus |
2R | 22873828..22874427 | 1214..1813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22872230..22872392 | 760..922 | 100 | -> | Plus |
2R | 22873455..22873636 | 1032..1213 | 100 | -> | Plus |
2R | 22873268..22873376 | 923..1031 | 100 | -> | Plus |
2R | 22871295..22871859 | 1..565 | 100 | -> | Plus |
2R | 22871942..22872135 | 566..759 | 100 | -> | Plus |
2R | 22873828..22874427 | 1214..1813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22872230..22872392 | 760..922 | 100 | -> | Plus |
2R | 22873455..22873636 | 1032..1213 | 100 | -> | Plus |
2R | 22873268..22873376 | 923..1031 | 100 | -> | Plus |
2R | 22871295..22871859 | 1..565 | 100 | -> | Plus |
2R | 22871942..22872135 | 566..759 | 100 | -> | Plus |
2R | 22873828..22874427 | 1214..1813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 18758818..18759382 | 1..565 | 100 | -> | Plus |
arm_2R | 18759465..18759658 | 566..759 | 100 | -> | Plus |
arm_2R | 18759753..18759915 | 760..922 | 100 | -> | Plus |
arm_2R | 18760791..18760899 | 923..1031 | 100 | -> | Plus |
arm_2R | 18760978..18761159 | 1032..1213 | 100 | -> | Plus |
arm_2R | 18761351..18761950 | 1214..1813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22873159..22873352 | 566..759 | 100 | -> | Plus |
2R | 22873447..22873609 | 760..922 | 100 | -> | Plus |
2R | 22874485..22874593 | 923..1031 | 100 | -> | Plus |
2R | 22874672..22874853 | 1032..1213 | 100 | -> | Plus |
2R | 22872512..22873076 | 1..565 | 100 | -> | Plus |
2R | 22875045..22875644 | 1214..1813 | 100 | Plus |
Translation from 501 to 1292
> RE31221.hyp MAGWRGRGLRATLLAVLALLSVTHSVRITNLRVPRTYTLFRDHEPDPLVL DCEVEIGPREQGFVLKWLFNNHSIYQWIPSVKGFAMGFMKSKIDTKIFTM EGSPGVISIKNPDWNMTGEYTCAVQTFESTDKRSARLQIIVPESDFMLEA RMSGSRMDVDIMCAVQHVFPQPMLSVMFDTHILDSVLTQLDQDPSGLYSM TVRTRIPRDQLESPTPITCAFILVGTNYTKRRETIFYDKASTIQRKWTTV AVVMSIASLALSS*
Translation from 501 to 1292
> RE31221.pep MAGWRGRGLRATLLAVLALLSVTHSVRITNLRVPRTYTLFRDHEPDPLVL DCEVEIGPREQGFVLKWLFNNHSIYQWIPSVKGFAMGFMKSKIDTKIFTM EGSPGVISIKNPDWNMTGEYTCAVQTFESTDKRSARLQIIVPESDFMLEA RMSGSRMDVDIMCAVQHVFPQPMLSVMFDTHILDSVLTQLDQDPSGLYSM TVRTRIPRDQLESPTPITCAFILVGTNYTKRRETIFYDKASTIQRKWTTV AVVMSIASLALSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13550-PA | 262 | GF13550-PA | 1..262 | 1..263 | 1254 | 90.2 | Plus |
Dana\GF12870-PA | 261 | GF12870-PA | 41..228 | 47..234 | 180 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22809-PA | 263 | GG22809-PA | 1..263 | 1..263 | 1385 | 98.1 | Plus |
Dere\GG22897-PA | 260 | GG22897-PA | 33..173 | 39..177 | 162 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21798-PA | 263 | GH21798-PA | 1..263 | 1..263 | 1192 | 87.8 | Plus |
Dgri\GH21689-PA | 235 | GH21689-PA | 30..189 | 47..202 | 146 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13532-PA | 263 | CG13532-PA | 1..263 | 1..263 | 1364 | 100 | Plus |
CG5597-PA | 260 | CG5597-PA | 33..173 | 39..177 | 168 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20547-PA | 263 | GI20547-PA | 1..263 | 1..263 | 1205 | 89.4 | Plus |
Dmoj\GI18843-PA | 260 | GI18843-PA | 30..197 | 37..201 | 157 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10131-PA | 261 | GL10131-PA | 1..261 | 1..263 | 1255 | 90.5 | Plus |
Dper\GL11173-PA | 260 | GL11173-PA | 33..173 | 39..177 | 162 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12347-PA | 261 | GA12347-PA | 1..261 | 1..263 | 1255 | 90.5 | Plus |
Dpse\GA18997-PA | 260 | GA18997-PA | 33..173 | 39..177 | 162 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15966-PA | 263 | GM15966-PA | 1..263 | 1..263 | 1410 | 100 | Plus |
Dsec\GM13667-PA | 135 | GM13667-PA | 2..135 | 46..177 | 170 | 29 | Plus |
Dsec\GM16057-PA | 260 | GM16057-PA | 33..173 | 39..177 | 170 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11718-PA | 263 | GD11718-PA | 1..263 | 1..263 | 1410 | 100 | Plus |
Dsim\GD11805-PA | 260 | GD11805-PA | 33..173 | 39..177 | 168 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22400-PA | 263 | GJ22400-PA | 1..263 | 1..263 | 1199 | 88.6 | Plus |
Dvir\GJ21874-PA | 258 | GJ21874-PA | 37..227 | 46..236 | 158 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20788-PA | 261 | GK20788-PA | 22..261 | 24..263 | 1208 | 93.3 | Plus |
Dwil\GK15917-PA | 582 | GK15917-PA | 355..519 | 40..201 | 155 | 25.1 | Plus |
Dwil\GK15667-PA | 374 | GK15667-PA | 169..358 | 1..189 | 153 | 24.9 | Plus |