BDGP Sequence Production Resources |
Search the DGRC for RE31307
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 313 |
Well: | 7 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14229-RA |
Protein status: | RE31307.pep: gold |
Preliminary Size: | 321 |
Sequenced Size: | 796 |
Gene | Date | Evidence |
---|---|---|
CG14229 | 2001-12-14 | Blastp of sequenced clone |
CG14229 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14229 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14229 | 2008-04-29 | Release 5.5 accounting |
CG14229 | 2008-08-15 | Release 5.9 accounting |
CG14229 | 2008-12-18 | 5.12 accounting |
796 bp (796 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071286
> RE31307.complete GGTGGATGTCGCTGCTGTGAAACGGGGCAGGACAAAACAATTGACCAATA GGAACCGAAACCAACACACTGCACTGGCCCCGGGATCGGAATGGCTGGAT TCCTGAAGACAAGAAAGCGCAGCCGGGAGGATGAACTGGCCTGCGAGTCG CCCCTTTCGAAGCGCATCAACAACCTGAATCTGAACTACGAGGATGGGAA CAGCAGCAGCAGCAGCAGCTGCAGCATTCCGCCACTGTCGGGAGGAGGAG CGACTGGTGGATCCGGCGGGTCCGATGCAGCCGGAAACGGTGTGGCGGCC GGATACGAATACAACCCAGAACTGGGAGCCGAACAAAACCCATTTTACTA CGAGAAGAACAAGATGCTGTACGACCTGCATGTCGAGCGCATCAAGCGGA GCAGCCAGTAGCTAGTGATCATGGATTCCGGTGTGCGAGTCCAAGTCCTG GCACAGCCATTTAAGTGCCAACACGAGTTATCTGCAGCAACACTCTCTCT AGGTTCAAAGTAATTCGCCTCCGTTCAGTCTTCTCTGCGCACGGATTCGG ATATCCGTGTCTGGAGTCACTTGCGTTTGTGTGATAAGCATTGTTTACTT GCATGGCATTAGCATCACCCCTGATGCATACACATAATAATAGTAGTATA AATTGAGCTAAGAGTCCCCCAAACACGCACATGAATATATATAAACTATG TTCATCGGTTACCATCCCTTCAATATGTATTTATAATCCTGCATGTATAA TTTATTCTAAGAATAATGTAAGAAAACCTCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14229-RA | 1210 | CG14229-RA | 210..989 | 1..780 | 3900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19582970..19583636 | 114..780 | 96 | <- | Minus |
chrX | 19583701..19583813 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14229-RA | 1..321 | 91..411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14229-RA | 1..321 | 91..411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14229-RA | 1..321 | 91..411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14229-RA | 1..321 | 91..411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14229-RA | 1..321 | 91..411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14229-RA | 1..780 | 1..780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14229-RA | 1..780 | 1..780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14229-RA | 18..797 | 1..780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14229-RA | 1..780 | 1..780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14229-RA | 18..797 | 1..780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19694198..19694864 | 114..780 | 100 | <- | Minus |
X | 19694929..19695041 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19694198..19694864 | 114..780 | 100 | <- | Minus |
X | 19694929..19695041 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19694198..19694864 | 114..780 | 100 | <- | Minus |
X | 19694929..19695041 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19588231..19588897 | 114..780 | 100 | <- | Minus |
arm_X | 19588962..19589074 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19702296..19702962 | 114..780 | 100 | <- | Minus |
X | 19703027..19703139 | 1..113 | 100 | Minus |
Translation from 90 to 410
> RE31307.pep MAGFLKTRKRSREDELACESPLSKRINNLNLNYEDGNSSSSSSCSIPPLS GGGATGGSGGSDAAGNGVAAGYEYNPELGAEQNPFYYEKNKMLYDLHVER IKRSSQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20268-PA | 110 | GF20268-PA | 1..110 | 1..106 | 337 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18030-PA | 107 | GG18030-PA | 1..107 | 1..106 | 446 | 89.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12257-PA | 115 | GH12257-PA | 1..115 | 1..106 | 308 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14229-PB | 106 | CG14229-PB | 1..106 | 1..106 | 554 | 100 | Plus |
CG14229-PC | 106 | CG14229-PC | 1..106 | 1..106 | 554 | 100 | Plus |
CG14229-PA | 106 | CG14229-PA | 1..106 | 1..106 | 554 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11017-PA | 112 | GI11017-PA | 1..112 | 1..106 | 309 | 62.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18306-PA | 131 | GL18306-PA | 1..131 | 1..106 | 281 | 55.3 | Plus |
Dper\GL25995-PA | 87 | GL25995-PA | 1..84 | 1..106 | 132 | 33 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27433-PA | 103 | GA27433-PA | 1..103 | 1..106 | 301 | 64.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22715-PA | 140 | GM22715-PA | 43..140 | 9..106 | 358 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24449-PA | 106 | GD24449-PA | 1..106 | 1..106 | 442 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15617-PA | 114 | GJ15617-PA | 1..114 | 1..106 | 319 | 67.8 | Plus |
Dvir\GJ24051-PA | 110 | GJ24051-PA | 1..108 | 1..104 | 141 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15919-PA | 129 | GK15919-PA | 1..129 | 1..106 | 287 | 55.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17359-PA | 112 | GE17359-PA | 1..112 | 1..106 | 404 | 81.2 | Plus |
Translation from 90 to 410
> RE31307.hyp MAGFLKTRKRSREDELACESPLSKRINNLNLNYEDGNSSSSSSCSIPPLS GGGATGGSGGSDAAGNGVAAGYEYNPELGAEQNPFYYEKNKMLYDLHVER IKRSSQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14229-PB | 106 | CG14229-PB | 1..106 | 1..106 | 554 | 100 | Plus |
CG14229-PC | 106 | CG14229-PC | 1..106 | 1..106 | 554 | 100 | Plus |
CG14229-PA | 106 | CG14229-PA | 1..106 | 1..106 | 554 | 100 | Plus |