BDGP Sequence Production Resources |
Search the DGRC for RE31310
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 313 |
Well: | 10 |
Vector: | pFlc-1 |
Associated Gene/Transcript | mthl14-RA |
Protein status: | RE31310.pep: gold |
Sequenced Size: | 2103 |
Gene | Date | Evidence |
---|---|---|
CG32476 | 2001-12-14 | Blastp of sequenced clone |
CG13879 | 2002-01-01 | Sim4 clustering to Release 2 |
CG32476 | 2003-01-01 | Sim4 clustering to Release 3 |
mthl14 | 2008-04-29 | Release 5.5 accounting |
mthl14 | 2008-08-15 | Release 5.9 accounting |
mthl14 | 2008-12-18 | 5.12 accounting |
2103 bp (2103 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071287
> RE31310.complete ATCGTTATCTTATCGCCTGCACAAAGTGATTCCATTGCAGAATTAAAACT TCTTTTTCGCTAGTATTACTTTATTAATCAAGCTCAGTGGTTGCATTTTA AATAGCAAGCATAAATTATTTGACATATTGGTTGAAAAGGCAATATGAAT CTAGGCCACTGGAATTTTCTCCTAGCTCTAATCAGTTTACAAACGTTTTT TAACGCCTCCGCACAGATAAGCACTGTAAATAACAGTTCGAAGGGATCAA ACAACTCAAATATTTTCCATGAAGACACATTCAATAGCACTTCGATTGAC GTTCTGGACGCCTCAATACATTCAACACTGGTTGTACCTCAAACATATTC GACAGAAGCTGCAACAATATCAGGTGCTAGGTTCGCAACCTCTGTTCCTG TTCAAAGTCCTGTAGACAACCCGTTAGATCCGGCGGACTGTTCTCAACGG GAAAAGTACAGAAAGCAACCAGTTGCAACACCATCGTCTCGTTTAAGAAA ATGCTGCCCACATGGAGAAAACTTAAATATATATCGGGAAAATCAAAGCG ATTCGATGTGCGACAACGGGCTCTTAAGCTTCGAACCGACTATAATAAGT GCAGTTCTGTTCGATAACTGCATTGAAGATTTGGAGGTTGAGACTACGCT CGACTACGACATTGGAAATCCGTGCAACAGTTCTCTTTTGTACGACGACA AAGACGATGTTTTCTTTGTTCTGCAAGACGGTTCGTTATTAATCATCGAC AAATTTGGCAACGAATCATACACTGTGAAGGAACATTATTGCTTGGATAT TGATAAGTCAGGACACTTGTTTGCCTTTACATGTGTAACCCAAGTGGAAG AACAAATTGCCTTCGCAAAAGTCGTTTTTGTTGCCGTTCTTATGCTTATA TCTATGCCCTGCCTGCTATTAGTTAGTTATTTGCACATGACACTTCGTTT ATTGCGTAACTTGCATGGTCTCTCGCTAAGTTTGATGTCTCTGTGCTTGG CGTCTGGATACTTTGTGCACTCCGTTGTGCACATCTATGGGATCCCGAAC CAAGGGTTCATTGGCTACGTCATACAGTTTTGTATTTTAAGTTACTTCTT CTGGTACTTGTGCATATGCTTCAATGTTCTTTTGAATGTGTGGTACAAGT TGCCTTGCTGCATTCAATGCTCAAAGAGTTGGGCCACCTTTAATTTTGCG TGTTACGCTGTTTTTGCCTTTTCCGGACCGGCCACAATAGTTGCACTAAC TGTTCAAAAAGGACTCCCAGGAATGCCGTCTTACTTTCTGCAAGGCCTAA CTGAATCCATCCGAGATTCCCAACGTTACTTTATTCCTCCAGTGTCTACT ATACTTTTTCTAAGTTTTTTGCTTAACATCATATCGTTCTTCGGATTTCA ACGTATAAGCGGCTACGCCAAGGCTGAAAAAAACATTCAGGAGCGAAAAT GCTTGTTTGACCAACAAAAATATGAAGATGTTAAAAAAGACGCTAAATGT GTCAGCTTACTTGGAATAATAATGGTCGTTAGCTGGCTGCTCGAAATAAT AACATTTTACTCGGGATCGAATTCAAATTACCTGATACTCTGTGACATGG TGAATGGACTCCAGGGAGTTTGGGTACTGCTCATTTTTCTAGTCGTGCGC AGGCGTCGCACAATAATATTAAGGTGGTGGTATGATCGTGGTTCCCACGA AATTGAAGGCACAGAGCTGCAAGCTCTTAGTAATAGTCCCACATAGATAT ATAGAATTATAATACAATTACATTACATACGTTCAAATCTGCGATCGCCG TTAATATTACATTATTTTTTAATTATATTAAATTCTGGTTTATTTGACCT GTAAAGAATGATGTGCTTATAAGCAAATCAAATTGATGAAAAGAGAAAAA CATTCGAAAATTGCTGAACAGCTGAACCTGATATCCTTTAATAGAATATA TGTTGTTGCGGGCCACATTACCGAACCATTTCCCAAACATATTTGTGAAA ATTTAACTTTGTGTAAATTGTGGTTTATTTAAACTTATATAAATACTATT AAATATTAAATGTTTGCTGTCACTTATATGGTCATATAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 249664..250260 | 1491..2087 | 2985 | 100 | Plus |
chr3L | 24539361 | chr3L | 248874..249299 | 871..1296 | 2130 | 100 | Plus |
chr3L | 24539361 | chr3L | 248157..248576 | 261..680 | 2100 | 100 | Plus |
chr3L | 24539361 | chr3L | 248629..248822 | 679..872 | 970 | 100 | Plus |
chr3L | 24539361 | chr3L | 247938..248071 | 127..260 | 670 | 100 | Plus |
chr3L | 24539361 | chr3L | 247450..247575 | 1..126 | 630 | 100 | Plus |
chr3L | 24539361 | chr3L | 249486..249605 | 1371..1490 | 600 | 100 | Plus |
chr3L | 24539361 | chr3L | 249353..249432 | 1292..1371 | 400 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 249709..250308 | 1491..2090 | 3000 | 100 | Plus |
3L | 28110227 | 3L | 248919..249344 | 871..1296 | 2130 | 100 | Plus |
3L | 28110227 | 3L | 248202..248621 | 261..680 | 2100 | 100 | Plus |
3L | 28110227 | 3L | 248674..248867 | 679..872 | 970 | 100 | Plus |
3L | 28110227 | 3L | 247983..248116 | 127..260 | 670 | 100 | Plus |
3L | 28110227 | 3L | 247495..247620 | 1..126 | 630 | 100 | Plus |
3L | 28110227 | 3L | 249531..249650 | 1371..1490 | 600 | 100 | Plus |
3L | 28110227 | 3L | 249398..249477 | 1292..1371 | 400 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 249709..250308 | 1491..2090 | 3000 | 100 | Plus |
3L | 28103327 | 3L | 248919..249344 | 871..1296 | 2130 | 100 | Plus |
3L | 28103327 | 3L | 248202..248621 | 261..680 | 2100 | 100 | Plus |
3L | 28103327 | 3L | 248674..248867 | 679..872 | 970 | 100 | Plus |
3L | 28103327 | 3L | 247983..248116 | 127..260 | 670 | 100 | Plus |
3L | 28103327 | 3L | 247495..247620 | 1..126 | 630 | 100 | Plus |
3L | 28103327 | 3L | 249531..249650 | 1371..1490 | 600 | 100 | Plus |
3L | 28103327 | 3L | 249398..249477 | 1292..1371 | 400 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 799..866 | 1978..2044 | 121 | 68.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 247450..247575 | 1..126 | 100 | -> | Plus |
chr3L | 247938..248071 | 127..260 | 100 | -> | Plus |
chr3L | 248157..248576 | 261..680 | 100 | -> | Plus |
chr3L | 248631..248820 | 681..870 | 100 | -> | Plus |
chr3L | 248874..249297 | 871..1294 | 100 | -> | Plus |
chr3L | 249356..249432 | 1295..1371 | 100 | -> | Plus |
chr3L | 249487..249605 | 1372..1490 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mthl14-RA | 1..1602 | 145..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mthl14-RA | 1..1602 | 145..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mthl14-RA | 1..1602 | 145..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mthl14-RA | 1..1602 | 145..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mthl14-RA | 1..1602 | 145..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mthl14-RA | 1..2087 | 1..2087 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mthl14-RA | 1..2087 | 1..2087 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mthl14-RA | 5..2091 | 1..2087 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mthl14-RA | 1..2087 | 1..2087 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mthl14-RA | 5..2091 | 1..2087 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 247495..247620 | 1..126 | 100 | -> | Plus |
3L | 247983..248116 | 127..260 | 100 | -> | Plus |
3L | 248202..248621 | 261..680 | 100 | -> | Plus |
3L | 248676..248865 | 681..870 | 100 | -> | Plus |
3L | 248919..249342 | 871..1294 | 100 | -> | Plus |
3L | 249401..249477 | 1295..1371 | 100 | -> | Plus |
3L | 249532..249650 | 1372..1490 | 100 | -> | Plus |
3L | 249709..250305 | 1491..2087 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 247495..247620 | 1..126 | 100 | -> | Plus |
3L | 247983..248116 | 127..260 | 100 | -> | Plus |
3L | 248202..248621 | 261..680 | 100 | -> | Plus |
3L | 248676..248865 | 681..870 | 100 | -> | Plus |
3L | 248919..249342 | 871..1294 | 100 | -> | Plus |
3L | 249401..249477 | 1295..1371 | 100 | -> | Plus |
3L | 249532..249650 | 1372..1490 | 100 | -> | Plus |
3L | 249709..250305 | 1491..2087 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 247495..247620 | 1..126 | 100 | -> | Plus |
3L | 247983..248116 | 127..260 | 100 | -> | Plus |
3L | 248202..248621 | 261..680 | 100 | -> | Plus |
3L | 248676..248865 | 681..870 | 100 | -> | Plus |
3L | 248919..249342 | 871..1294 | 100 | -> | Plus |
3L | 249401..249477 | 1295..1371 | 100 | -> | Plus |
3L | 249532..249650 | 1372..1490 | 100 | -> | Plus |
3L | 249709..250305 | 1491..2087 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 247495..247620 | 1..126 | 100 | -> | Plus |
arm_3L | 247983..248116 | 127..260 | 100 | -> | Plus |
arm_3L | 248202..248621 | 261..680 | 100 | -> | Plus |
arm_3L | 248676..248865 | 681..870 | 100 | -> | Plus |
arm_3L | 248919..249342 | 871..1294 | 100 | -> | Plus |
arm_3L | 249401..249477 | 1295..1371 | 100 | -> | Plus |
arm_3L | 249532..249650 | 1372..1490 | 100 | -> | Plus |
arm_3L | 249709..250305 | 1491..2087 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 248202..248621 | 261..680 | 100 | -> | Plus |
3L | 248676..248865 | 681..870 | 100 | -> | Plus |
3L | 248919..249342 | 871..1294 | 100 | -> | Plus |
3L | 249401..249477 | 1295..1371 | 100 | -> | Plus |
3L | 249532..249650 | 1372..1490 | 100 | -> | Plus |
3L | 249709..250305 | 1491..2087 | 100 | Plus | |
3L | 247495..247620 | 1..126 | 100 | -> | Plus |
3L | 247983..248116 | 127..260 | 100 | -> | Plus |
Translation from 144 to 1745
> RE31310.pep MNLGHWNFLLALISLQTFFNASAQISTVNNSSKGSNNSNIFHEDTFNSTS IDVLDASIHSTLVVPQTYSTEAATISGARFATSVPVQSPVDNPLDPADCS QREKYRKQPVATPSSRLRKCCPHGENLNIYRENQSDSMCDNGLLSFEPTI ISAVLFDNCIEDLEVETTLDYDIGNPCNSSLLYDDKDDVFFVLQDGSLLI IDKFGNESYTVKEHYCLDIDKSGHLFAFTCVTQVEEQIAFAKVVFVAVLM LISMPCLLLVSYLHMTLRLLRNLHGLSLSLMSLCLASGYFVHSVVHIYGI PNQGFIGYVIQFCILSYFFWYLCICFNVLLNVWYKLPCCIQCSKSWATFN FACYAVFAFSGPATIVALTVQKGLPGMPSYFLQGLTESIRDSQRYFIPPV STILFLSFLLNIISFFGFQRISGYAKAEKNIQERKCLFDQQKYEDVKKDA KCVSLLGIIMVVSWLLEIITFYSGSNSNYLILCDMVNGLQGVWVLLIFLV VRRRRTIILRWWYDRGSHEIEGTELQALSNSPT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25040-PA | 529 | GF25040-PA | 4..522 | 5..528 | 1891 | 71.1 | Plus |
Dana\GF24876-PA | 641 | GF24876-PA | 115..515 | 117..508 | 195 | 22.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14707-PA | 529 | GG14707-PA | 1..529 | 1..533 | 2403 | 87.3 | Plus |
Dere\GG14666-PA | 682 | GG14666-PA | 220..550 | 184..508 | 165 | 20.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15734-PA | 474 | GH15734-PA | 30..470 | 96..531 | 1751 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mthl14-PA | 533 | CG32476-PA | 1..533 | 1..533 | 2802 | 100 | Plus |
mth-PE | 514 | CG6936-PE | 91..509 | 117..533 | 199 | 22.7 | Plus |
mth-PA | 514 | CG6936-PA | 91..509 | 117..533 | 199 | 22.7 | Plus |
mth-PB | 522 | CG6936-PB | 91..478 | 117..502 | 197 | 23.2 | Plus |
mthl10-PC | 584 | CG17061-PC | 191..528 | 188..508 | 174 | 20.7 | Plus |
mthl10-PB | 585 | CG17061-PB | 191..528 | 188..508 | 174 | 20.7 | Plus |
mthl10-PD | 557 | CG17061-PD | 191..518 | 188..508 | 172 | 20.6 | Plus |
mthl10-PG | 575 | CG17061-PG | 191..518 | 188..508 | 172 | 20.6 | Plus |
mthl10-PF | 575 | CG17061-PF | 191..518 | 188..508 | 172 | 20.6 | Plus |
mthl10-PE | 575 | CG17061-PE | 191..518 | 188..508 | 172 | 20.6 | Plus |
mthl10-PA | 577 | CG17061-PA | 191..518 | 188..508 | 172 | 20.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12790-PA | 502 | GI12790-PA | 56..498 | 94..532 | 1659 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16120-PA | 399 | GL16120-PA | 1..395 | 138..531 | 1745 | 84.8 | Plus |
Dper\GL16143-PA | 596 | GL16143-PA | 175..587 | 96..502 | 153 | 21.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16933-PA | 399 | GA16933-PA | 1..395 | 138..531 | 1752 | 85.4 | Plus |
Dpse\GA14305-PA | 684 | GA14305-PA | 153..553 | 117..508 | 206 | 23.3 | Plus |
Dpse\GA19967-PA | 670 | GA19967-PA | 208..645 | 96..527 | 158 | 20.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14322-PA | 534 | GM14322-PA | 1..534 | 1..533 | 2744 | 96.6 | Plus |
Dsec\GM23213-PA | 482 | GM23213-PA | 10..337 | 188..508 | 161 | 20.6 | Plus |
Dsec\GM14281-PA | 515 | GM14281-PA | 69..467 | 96..491 | 158 | 22.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11003-PA | 534 | GD11003-PA | 1..534 | 1..533 | 2755 | 97 | Plus |
Dsim\mth-PA | 515 | GD25710-PA | 69..467 | 96..491 | 160 | 22.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16090-PA | 459 | GJ16090-PA | 4..455 | 85..531 | 1753 | 72.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16540-PA | 251 | GK16540-PA | 119..251 | 408..533 | 496 | 72.9 | Plus |
Dwil\GK16540-PA | 251 | GK16540-PA | 1..122 | 138..261 | 486 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21070-PA | 558 | GE21070-PA | 1..558 | 1..533 | 2479 | 87.3 | Plus |
Translation from 144 to 1745
> RE31310.hyp MNLGHWNFLLALISLQTFFNASAQISTVNNSSKGSNNSNIFHEDTFNSTS IDVLDASIHSTLVVPQTYSTEAATISGARFATSVPVQSPVDNPLDPADCS QREKYRKQPVATPSSRLRKCCPHGENLNIYRENQSDSMCDNGLLSFEPTI ISAVLFDNCIEDLEVETTLDYDIGNPCNSSLLYDDKDDVFFVLQDGSLLI IDKFGNESYTVKEHYCLDIDKSGHLFAFTCVTQVEEQIAFAKVVFVAVLM LISMPCLLLVSYLHMTLRLLRNLHGLSLSLMSLCLASGYFVHSVVHIYGI PNQGFIGYVIQFCILSYFFWYLCICFNVLLNVWYKLPCCIQCSKSWATFN FACYAVFAFSGPATIVALTVQKGLPGMPSYFLQGLTESIRDSQRYFIPPV STILFLSFLLNIISFFGFQRISGYAKAEKNIQERKCLFDQQKYEDVKKDA KCVSLLGIIMVVSWLLEIITFYSGSNSNYLILCDMVNGLQGVWVLLIFLV VRRRRTIILRWWYDRGSHEIEGTELQALSNSPT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mthl14-PA | 533 | CG32476-PA | 1..533 | 1..533 | 2802 | 100 | Plus |
mth-PE | 514 | CG6936-PE | 91..509 | 117..533 | 199 | 22.7 | Plus |
mth-PA | 514 | CG6936-PA | 91..509 | 117..533 | 199 | 22.7 | Plus |
mth-PB | 522 | CG6936-PB | 91..478 | 117..502 | 197 | 23.2 | Plus |
mthl10-PC | 584 | CG17061-PC | 191..528 | 188..508 | 174 | 20.7 | Plus |