BDGP Sequence Production Resources |
Search the DGRC for RE31520
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 315 |
Well: | 20 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG9667-RA |
Protein status: | RE31520.pep: gold |
Preliminary Size: | 856 |
Sequenced Size: | 876 |
Gene | Date | Evidence |
---|---|---|
CG9667 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9667 | 2002-01-18 | Blastp of sequenced clone |
CG9667 | 2008-04-29 | Release 5.5 accounting |
CG9667 | 2008-08-15 | Release 5.9 accounting |
CG9667 | 2008-12-18 | 5.12 accounting |
876 bp (876 high quality bases) assembled on 2002-01-18
GenBank Submission: AY084151
> RE31520.complete AAGAAGTTAGTAAACAAAATGGCGCGCAATGCAGAGAAGGCAATGACAAC TTTGGCACGTTGGCGGGCCGCAAAAGAAGTGGAATCTGGTGAAAAGGAAC GCCGGCCCTATTTGGCCTCCGAGTGCCACGATTTGCCCAGATGTGAGAAG TTCCGCCTGGAGATAATACGCGACATATCGAAGAAGGTGGCCCAGATACA GAATGCTGGCTTGGGAGAATTCCGGATTCGCGATCTGAACGATGAAATCA ACAAGTTATTGCGTGAGAAACGGCATTGGGAAAATCAGATATCCTCATTG GGTGGCCCCCACTATAGACGCTATGGTCCCAAGATGTTCGATGCGGAGGG CCGTGAAGTTCCCGGCAATCGAGGCTACAAATACTTTGGAGCCGCCAAGG ATCTGCCGGGTGTTCGCGAGCTCTTTGAACAGGATCCTCCGCCGCCACCC AGGAAATCACGCGCTGAACTAATGAAGGACATAGATGCCGAATACTACGG CTATCGAGATGACGAAGATGGTGTTCTGATCCCTCTGGAGGAACGCATCG AACGAGCGGCCATTCAGAAGGCCGTGCAGGAATGGCGGGAGAAAATGGCC AGAGATGGTCGCATAATCGATGACGAAGAGGAGGATGAAATATATCCCCT TTCGGGACCAGCACGCGAAGCCATCGAGGATGCCAAGGCTCGAGCCGCCG TGGAGGATCCTCATGGCCTATTGGCATCCAAGTTCACCGCTCACGTTCCC GTGCCGACGCAACAAGATGTACAGGAAGCACTGCTGCGCCAGCGGAAACG GGAACTGCTGGAGAAATACGCCGGTGGCACTAACTAAGCTCAATAAACAT TCTAAACTCCAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 3951320..3951974 | 206..860 | 99 | <- | Minus |
chr3R | 3952036..3952196 | 45..205 | 100 | <- | Minus |
chr3R | 3952260..3952282 | 22..44 | 100 | <- | Minus |
chr3R | 3952344..3952364 | 1..21 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9667-RA | 1..819 | 19..837 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9667-RA | 1..819 | 19..837 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9667-RA | 1..819 | 19..837 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9667-RA | 1..819 | 19..837 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9667-RA | 1..819 | 19..837 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9667-RA | 1..859 | 1..860 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9667-RA | 1..859 | 1..860 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9667-RA | 25..883 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9667-RA | 1..859 | 1..860 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9667-RA | 25..883 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8125289..8125943 | 206..860 | 99 | <- | Minus |
3R | 8126005..8126165 | 45..205 | 100 | <- | Minus |
3R | 8126229..8126251 | 22..44 | 100 | <- | Minus |
3R | 8126313..8126333 | 1..21 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8125289..8125943 | 206..860 | 99 | <- | Minus |
3R | 8126005..8126165 | 45..205 | 100 | <- | Minus |
3R | 8126229..8126251 | 22..44 | 100 | <- | Minus |
3R | 8126313..8126333 | 1..21 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8125289..8125943 | 206..860 | 99 | <- | Minus |
3R | 8126005..8126165 | 45..205 | 100 | <- | Minus |
3R | 8126229..8126251 | 22..44 | 100 | <- | Minus |
3R | 8126313..8126333 | 1..21 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 3951011..3951665 | 206..860 | 99 | <- | Minus |
arm_3R | 3951727..3951887 | 45..205 | 100 | <- | Minus |
arm_3R | 3951951..3951973 | 22..44 | 100 | <- | Minus |
arm_3R | 3952035..3952055 | 1..21 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7866120..7866774 | 206..860 | 99 | <- | Minus |
3R | 7866836..7866996 | 45..205 | 100 | <- | Minus |
3R | 7867060..7867082 | 22..44 | 100 | <- | Minus |
3R | 7867144..7867164 | 1..21 | 100 | Minus |
Translation from 0 to 836
> RE31520.hyp KKLVNKMARNAEKAMTTLARWRAAKEVESGEKERRPYLASECHDLPRCEK FRLEIIRDISKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWENQISSL GGPHYRRYGPKMFDAEGREVPGNRGYKYFGAAKDLPGVRELFEQDPPPPP RKSRAELMKDIDAEYYGYRDDEDGVLIPLEERIERAAIQKAVQEWREKMA RDGRIIDDEEEDEIYPLSGPAREAIEDAKARAAVEDPHGLLASKFTAHVP VPTQQDVQEALLRQRKRELLEKYAGGTN*
Translation from 0 to 836
> RE31520.pep KKLVNKMARNAEKAMTTLARWRAAKEVESGEKERRPYLASECHDLPRCEK FRLEIIRDISKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWENQISSL GGPHYRRYGPKMFDAEGREVPGNRGYKYFGAAKDLPGVRELFEQDPPPPP RKSRAELMKDIDAEYYGYRDDEDGVLIPLEERIERAAIQKAVQEWREKMA RDGRIIDDEEEDEIYPLSGPAREAIEDAKARAAVEDPHGLLASKFTAHVP VPTQQDVQEALLRQRKRELLEKYAGGTN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18268-PA | 273 | GF18268-PA | 1..273 | 7..278 | 1368 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17474-PA | 272 | GG17474-PA | 1..272 | 7..278 | 1398 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19249-PA | 273 | GH19249-PA | 1..273 | 7..278 | 1255 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9667-PA | 272 | CG9667-PA | 1..272 | 7..278 | 1423 | 100 | Plus |
CG9667-PB | 264 | CG9667-PB | 1..264 | 15..278 | 1385 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24285-PA | 273 | GI24285-PA | 1..273 | 7..278 | 1216 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23279-PA | 274 | GL23279-PA | 1..274 | 7..278 | 1265 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21951-PA | 272 | GA21951-PA | 4..272 | 12..278 | 1220 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26367-PA | 272 | GM26367-PA | 1..272 | 7..278 | 1400 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20890-PA | 272 | GD20890-PA | 1..272 | 7..278 | 1403 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23062-PA | 274 | GJ23062-PA | 1..274 | 7..278 | 1262 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12885-PA | 275 | GK12885-PA | 1..275 | 7..278 | 1266 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24874-PA | 272 | GE24874-PA | 1..272 | 7..278 | 1398 | 98.2 | Plus |