Clone RE32027 Report

Gene	Date	Evidence
CG11556	2002-01-01	Sim4 clustering to Release 2
CG11556	2004-07-15	Blastp of sequenced clone
Rph	2008-04-29	Release 5.5 accounting
Rph	2008-08-15	Release 5.9 accounting
Rph	2008-12-18	5.12 accounting

Clone Sequence Records

RE32027.complete Sequence

3410 bp (3410 high quality bases) assembled on 2004-07-15

GenBank Submission: BT015226

> RE32027.complete
AGTCGCACACCAGCTGCTCACGCATTCGGACGTGTTTTCGCATCCGTTTC
GCAACCGATTCGCAAACGCTCCGCAGCTCGGCGCCGACAACAACAGTTGG
GCCCCATTGCGAACAACAGATACAAGTGGCCAGCGGACTGGAGTTTCGGC
GGGCCGGAGTCTCCATATCCGAATATAATGTGACAGGACGACAAGATGGA
CTTCCAGAATCGCAACAATACGGCCAACAAGTTTGTCTGCCCCAGCGACA
GGCAACTGGCCCTGCGTGCCAAATTAAAAGCTGGCTGGAGCAGTTCCAAG
ACCAGTGAGCCGCTGCGTCCCGAGGAGCAGGAGGCCATCATCTCGGTGAT
CCGGCGCAACGAGGAGATTGAGGTGGCCGAGCGGCAACGGGTTGGCCGCC
TGGTGGAGCGCGTCGAGAAGGTCAAGCAGCATGCCGTGGAGCGGGGACCC
AATTGCTGTCGCCTGTGCGGCGACACCTTCGGTATCCTGCGGCCGCAGCG
CATCCTGTGCGAGGACTGCCGCCAGTCGGTGTGCACCAAGTGCAGCGTGG
ACATTAACATCCGCTACCACACCAGCGAGCGGTCCCGCGAAATCTGGCTG
TGTCGCATCTGCTCCGAGACGCGCGAGATGTGGAAGAAGTCCGGAGCGTG
GTTCTTCAAGGGTCTGCCCAAGTACGATATGCCGCGCAGCGCCAGTGCCA
CGCCCATTCCCAACCCGGGACCCGGATCCATGGCAGGAACATCATGAAAC
GTTTCCATTTCCATAGTCCAATTCCCAATAAATCGTTATAGACGCTTCTT
TATGGTAACCATAATCAGAGCTTCAGCCGGATGGGTTAATATAAAGAGCC
AATAAGTGTAGTTCGTTCAGAGTCATTAACCAATTTAAATTCTACTCCAA
ATCGCTCAAATTCATCAGTCGTCGATAGATATAATCTTTTATTCAGAGCA
ACACCACTAATTACCTTCGAGTTATCAACGACTATCGCTATTATCATCGT
CCGCCCATCGCAATAATCGGTCTTCTATCTAGTCTATCGCTTATCGAAAA
GATCGCAGTCTGTCAATCGGAATCTGATAGCCACAGTCTGTCAGGCGGTT
TCCCTAATGTTTGATGATCAGTTTTAGGTGCATTTCGATTGCTATCGATA
CCGATACAGCGCAGTCATAATCGGCAATCAAATCACCGTACGACTATCGC
TATTATCGCACGAAACAGAGTATCGGAATTGCACATCGGCCTATTGTAAA
GGCGACACGCGGGCCGTTCAAAGCTGTCATGCGACGCCAACACGACCGGC
GCGGGTGAAGAAGCTAACGATCCGGGTGAACGACAGCAGCTCCAGCAGCA
GCGGGCACTCGGAGCCGGAGGATGAGGTGGACACCGGAGTAGGAATAGGC
GTCGGCGTTGTCGGTGGTGGCATGGCCAAGGGCATTGCTTCCACTCGTTT
GCAACGGGAGGATAGCTTCCGGCTGAGGGCATACGGCTCCATACGCAGCT
TTATCGACGGCGGCGAGCGGAAGTTGTCCAACTCCTTCTTCTTCAACCGC
CAGCAAAGTCAACGGCCATCGGAGTGCCCGGAATACGACAGCGTCAGCAT
GTCGAAGCTGAGGCGGGAGAGCAGCTTCCTGCGGCGCGGCTCCGTCAGCT
CCTCCTGGTCGATTAGCGATAGTTCCGGCTCCGGATCGAACAACTCCGGC
AACTCACAAACGCAGTCGCAGTACCAGCAGCACCAGCAACAGCTACAGCA
GCACTGTCGCGATCCCCTGCTCGGCTGGCTGGAGATTGCCATTAGCTATC
GTGAGGCCTTCCACAGCCTCGACTGCACCATGGTGCGTGCGCGGGATCTG
CCCGCCATGGATGCGGCCGGATTGGCGGACCCGTACTGCAAGCTCAACAT
CATTACGCCGGAGGCGCACACCAAGTACACGCGATGGCAGCGCACAAAGA
CGGTGCACAAGACCCGCAATCCGGAGTTCAACGAAACGCTGCAGTTCGTC
GGCGTGGAGCCCGAGGAGCTGGGTAACTCGCTGATTTACGTGGCCCTTTT
CGACGACGACAAGTACGGCCACGACTTTCTCGGCGCGGCCAAGGTCTGCC
TTTCCACGGTGCACAGCACGTCGCAGTACCGGATTTCGGTGCCACTCGGC
GTGGAGGACCAGTACAGCAACGCGGCGGAGATGGCCCAGAACTGGCCCAA
TGGCAAGATGCTTCTCTCGCTCTGCTACAACACCAAGCGAAGGGCGTTGG
TGGTGAATGTGAAACAGTGCATCAACCTGATGGCCATGGACAACAACGGC
AGCTCCGATCCCTTCGTCAAGATCCAACTCAAGCCGGATGCGCACAAGAA
CAAGAAGCACAAGACCAGCGTCAAATGGCGCACGCTCAATCCCATCTACA
ACGAGGAGTTCTACTTCGAGGCAAGTCCGCACGACCTCAACAAGGAGATG
CTCATCCTGACCGTGTGGGACAAGGATCTCGGCAAGAGCAACGACTTCCT
GGGCAGCCTGCAATTGGGCGCCCAAAGCAAAGGCGAACGCCTGCAGCAGT
GGCTCGACTGCATCCGATTGCCCGATCACTTCCACGAGAAATGGCATTGC
CTCGCCCCCGACAATCCCGCCCACTGAGTAGCCCCATCCGATCCCAACGC
CAACCGATCCCCAGTCCAATCGATTCGATCTTATCTCTACCGATATGGAT
GTTTTTCCTGTAGGACACATTTGAACGAACTGATTTCTCAGCGCAGTCAA
GGAAATATGAACCATATCTTTTACGTTAAGTAGTTCAGGAACATATTAAT
GCTAATGCTTTTTTCATTTCTATAACTTTTTTAACTTTAAACAGTTAATA
ATTGAATACTTTGTAATTTTAAAGATATAAACTGCATGCTTTGCTAGATC
GAATCAACACTAATTGGTAGCTCAAAGGACGATTTGCATTAGACTAAGCT
GAGAAATCAGGTCGTGGAAATGAGGCTTTAGCTCCAAATATACACATATA
TATATATACTTACATATACATACATATATATTATATACATATATTTTTGA
TAAGCCTGAATGGGTGTGAGCAAGCAAGAAGAAGCTAAAAAGAGCGAGAA
ATATTGTGTGTTTTTGAGTGAATGCTTTCCAAAAATCTCGTACGTAACCC
CAATTTTCTATGTCTATACTTTGGCTCTTATCGGCATTTTTGTACACTGT
ATATAGCTTGTTTAAGTGTCCTTACCAAGGGTTAACCAACATCAAAATCT
TTTCGATTCATTGCTAAATTCAATCTTTAATCAAACGTATACTTATGTAC
TTCAATATATCGAAATATATACATCTATATTCTCAAAAGATAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAA

RE32027.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:59:42

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Rph-RB	3341	Rph-RB	1..3341	1..3341	16690	99.9	Plus
Rph-RA	2894	Rph-RA	803..2894	1250..3341	10460	100	Plus
Rph-RA	2894	Rph-RA	69..805	1..737	3670	99.8	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:42:33

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chrX	22417052	chrX	10640450..10641467	3341..2324	5090	100	Minus
chrX	22417052	chrX	10642296..10643157	2111..1250	4310	100	Minus
chrX	22417052	chrX	10644585..10645049	737..273	2310	99.8	Minus
chrX	22417052	chrX	10643275..10643623	1252..904	1730	99.7	Minus
chrX	22417052	chrX	10648756..10649027	272..1	1360	100	Minus
chrX	22417052	chrX	10641529..10641744	2323..2108	1065	99.5	Minus
chrX	22417052	chrX	10643701..10643871	904..734	855	100	Minus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:49:30 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:42:31

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23542271	X	10749075..10750094	3343..2324	5100	100	Minus
X	23542271	X	10750923..10751784	2111..1250	4310	100	Minus
X	23542271	X	10753212..10753676	737..273	2310	99.8	Minus
X	23542271	X	10751902..10752250	1252..904	1745	100	Minus
X	23542271	X	10757395..10757666	272..1	1360	100	Minus
X	23542271	X	10750156..10750371	2323..2108	1080	100	Minus
X	23542271	X	10752328..10752498	904..734	855	100	Minus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:48:16

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23527363	X	10757173..10758192	3343..2324	5100	100	Minus
X	23527363	X	10759021..10759882	2111..1250	4310	100	Minus
X	23527363	X	10761310..10761774	737..273	2310	99.7	Minus
X	23527363	X	10760000..10760348	1252..904	1745	100	Minus
X	23527363	X	10765493..10765764	272..1	1360	100	Minus
X	23527363	X	10758254..10758477	2323..2099	1085	99.5	Minus
X	23527363	X	10760426..10760596	904..734	855	100	Minus

Blast to na_te.dros performed on 2019-03-15 22:42:31 has no hits.

RE32027.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:43:12 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chrX	10640450..10640746	3045..3341	100	==	Minus
chrX	10640804..10641467	2324..2987	100	<-	Minus
chrX	10641529..10641743	2109..2323	99	<-	Minus
chrX	10642299..10643155	1252..2108	95	<-	Minus
chrX	10643276..10643622	905..1251	99	<-	Minus
chrX	10643701..10643868	737..904	100	<-	Minus
chrX	10644586..10645049	273..736	99	<-	Minus
chrX	10648756..10649027	1..272	100		Minus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:09:32 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rph-RA	1..535	196..730	99	==	Plus
Rph-RA	536..1917	1245..2627	99		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:34:09 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rph-RA	1..535	196..730	99	==	Plus
Rph-RA	536..1917	1245..2627	99		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:30:26 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rph-RC	104..1563	1245..2713	99		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:18:03 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rph-RA	1..535	196..730	99	==	Plus
Rph-RA	536..1917	1245..2627	99		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:32:53 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rph-RC	104..1563	1245..2713	99		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:40:17 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rph-RA	1..730	1..730	99	==	Plus
Rph-RA	731..2826	1245..3341	99		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:34:09 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rph-RB	1..3341	1..3341	99		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:30:26 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rph-RB	1..3341	1..3341	99		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:18:03 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rph-RA	1..730	1..730	99	==	Plus
Rph-RA	731..2826	1245..3341	99		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:32:53 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rph-RB	1..3341	1..3341	99		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:43:12 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	10749077..10750094	2324..3341	100	<-	Minus
X	10750156..10750370	2109..2323	100	<-	Minus
X	10750926..10751782	1252..2108	100	<-	Minus
X	10751903..10752249	905..1251	100	<-	Minus
X	10752328..10752495	737..904	100	<-	Minus
X	10753213..10753676	273..736	99	<-	Minus
X	10757395..10757666	1..272	100		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:43:12 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	10749077..10750094	2324..3341	100	<-	Minus
X	10750156..10750370	2109..2323	100	<-	Minus
X	10750926..10751782	1252..2108	100	<-	Minus
X	10751903..10752249	905..1251	100	<-	Minus
X	10752328..10752495	737..904	100	<-	Minus
X	10753213..10753676	273..736	99	<-	Minus
X	10757395..10757666	1..272	100		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:43:12 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	10749077..10750094	2324..3341	100	<-	Minus
X	10750156..10750370	2109..2323	100	<-	Minus
X	10750926..10751782	1252..2108	100	<-	Minus
X	10751903..10752249	905..1251	100	<-	Minus
X	10752328..10752495	737..904	100	<-	Minus
X	10753213..10753676	273..736	99	<-	Minus
X	10757395..10757666	1..272	100		Minus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:30:26 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_X	10643110..10644127	2324..3341	100	<-	Minus
arm_X	10644189..10644403	2109..2323	100	<-	Minus
arm_X	10644959..10645815	1252..2108	100	<-	Minus
arm_X	10645936..10646282	905..1251	100	<-	Minus
arm_X	10646361..10646528	737..904	100	<-	Minus
arm_X	10647246..10647709	273..736	99	<-	Minus
arm_X	10651428..10651699	1..272	100		Minus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:55:09 Download gff for RE32027.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	10760001..10760347	905..1251	100	<-	Minus
X	10760426..10760593	737..904	100	<-	Minus
X	10761311..10761774	273..736	99	<-	Minus
X	10759024..10759880	1252..2108	100	<-	Minus
X	10765493..10765764	1..272	100		Minus
X	10757175..10758192	2324..3341	100	<-	Minus
X	10758254..10758468	2109..2323	100	<-	Minus

RE32027.hyp Sequence

Translation from 1421 to 2626

> RE32027.hyp
MAKGIASTRLQREDSFRLRAYGSIRSFIDGGERKLSNSFFFNRQQSQRPS
ECPEYDSVSMSKLRRESSFLRRGSVSSSWSISDSSGSGSNNSGNSQTQSQ
YQQHQQQLQQHCRDPLLGWLEIAISYREAFHSLDCTMVRARDLPAMDAAG
LADPYCKLNIITPEAHTKYTRWQRTKTVHKTRNPEFNETLQFVGVEPEEL
GNSLIYVALFDDDKYGHDFLGAAKVCLSTVHSTSQYRISVPLGVEDQYSN
AAEMAQNWPNGKMLLSLCYNTKRRALVVNVKQCINLMAMDNNGSSDPFVK
IQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLNKEMLILTVWD
KDLGKSNDFLGSLQLGAQSKGERLQQWLDCIRLPDHFHEKWHCLAPDNPA
H*

RE32027.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:14:51

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Rph-PD	401	CG11556-PD	1..401	1..401	2139	100	Plus
Rph-PB	401	CG11556-PB	1..401	1..401	2139	100	Plus
Rph-PA	638	CG11556-PA	238..638	1..401	2139	100	Plus
Rph-PC	520	CG11556-PC	94..358	1..265	1204	88.7	Plus
Syt1-PE	472	CG3139-PE	193..458	117..394	354	33.3	Plus

RE32027.pep Sequence

Translation from 1421 to 2626

> RE32027.pep
MAKGIASTRLQREDSFRLRAYGSIRSFIDGGERKLSNSFFFNRQQSQRPS
ECPEYDSVSMSKLRRESSFLRRGSVSSSWSISDSSGSGSNNSGNSQTQSQ
YQQHQQQLQQHCRDPLLGWLEIAISYREAFHSLDCTMVRARDLPAMDAAG
LADPYCKLNIITPEAHTKYTRWQRTKTVHKTRNPEFNETLQFVGVEPEEL
GNSLIYVALFDDDKYGHDFLGAAKVCLSTVHSTSQYRISVPLGVEDQYSN
AAEMAQNWPNGKMLLSLCYNTKRRALVVNVKQCINLMAMDNNGSSDPFVK
IQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLNKEMLILTVWD
KDLGKSNDFLGSLQLGAQSKGERLQQWLDCIRLPDHFHEKWHCLAPDNPA
H*

RE32027.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:34:58

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF20826-PA	659	GF20826-PA	253..659	9..401	1830	88.9	Plus
Dana\GF13871-PA	474	GF13871-PA	193..460	117..394	322	34	Plus
Dana\GF20608-PA	416	GF20608-PA	148..416	117..397	288	27.5	Plus
Dana\GF17667-PA	481	GF17667-PA	187..479	117..394	275	28	Plus
Dana\GF14804-PA	498	GF14804-PA	193..451	101..366	251	30.3	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:34:59

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG18904-PA	638	GG18904-PA	238..638	1..401	2153	98.3	Plus
Dere\GG24490-PA	474	GG24490-PA	193..460	117..394	323	34	Plus
Dere\GG16453-PA	416	GG16453-PA	148..416	117..397	285	27.1	Plus
Dere\GG13974-PA	474	GG13974-PA	180..472	117..394	277	28	Plus
Dere\GG21095-PA	496	GG21095-PA	193..451	101..366	248	30.3	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 19:35:00

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH12108-PA	542	GH12108-PA	263..520	9..230	788	66.7	Plus
Dgri\GH13767-PA	467	GH13767-PA	186..453	117..394	322	34	Plus
Dgri\GH23960-PA	417	GH23960-PA	93..417	63..397	300	25.6	Plus
Dgri\GH18298-PA	473	GH18298-PA	179..471	117..394	286	28.7	Plus
Dgri\GH11627-PA	506	GH11627-PA	219..464	116..370	252	31	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:58

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Rph-PD	401	CG11556-PD	1..401	1..401	2139	100	Plus
Rph-PB	401	CG11556-PB	1..401	1..401	2139	100	Plus
Rph-PA	638	CG11556-PA	238..638	1..401	2139	100	Plus
Rph-PC	520	CG11556-PC	94..358	1..265	1204	88.7	Plus
Syt1-PE	472	CG3139-PE	193..458	117..394	354	33.3	Plus
Syt1-PH	473	CG3139-PH	193..459	117..394	351	34	Plus
Syt1-PI	472	CG3139-PI	191..458	117..394	350	34	Plus
Syt1-PC	472	CG3139-PC	191..458	117..394	350	34	Plus
Syt1-PB	472	CG3139-PB	191..458	117..394	350	34	Plus
Syt1-PA	474	CG3139-PA	193..460	117..394	350	34	Plus
Syt7-PM	416	CG2381-PM	102..416	73..397	296	25.2	Plus
Syt7-PA	416	CG2381-PA	102..416	73..397	296	25.2	Plus
Syt7-PF	283	CG2381-PF	15..283	117..397	292	26.5	Plus
Syt4-PA	474	CG10047-PA	180..472	117..394	277	28	Plus
Sytalpha-PC	494	CG5559-PC	191..449	101..366	242	29.2	Plus
Sytalpha-PA	494	CG5559-PA	191..449	101..366	242	29.2	Plus
Sytalpha-PD	494	CG5559-PD	191..449	101..366	242	29.2	Plus
Sytalpha-PB	504	CG5559-PB	201..459	101..366	242	29.2	Plus
btsz-PF	600	CG44012-PF	264..562	118..379	238	27.7	Plus
btsz-PE	708	CG44012-PE	372..670	118..379	238	27.7	Plus
btsz-PB	1102	CG44012-PB	766..1064	118..379	238	27.7	Plus
btsz-PH	1137	CG44012-PH	801..1099	118..379	238	27.7	Plus
btsz-PD	1517	CG44012-PD	1181..1479	118..379	238	27.7	Plus
btsz-PJ	1567	CG44012-PJ	1231..1529	118..379	238	27.7	Plus
btsz-PG	1567	CG44012-PG	1231..1529	118..379	238	27.7	Plus
btsz-PC	2645	CG44012-PC	2309..2607	118..379	238	27.7	Plus
btsz-PI	3734	CG44012-PI	3398..3696	118..379	238	27.7	Plus
inaC-PA	700	CG6518-PA	195..326	261..394	216	36.3	Plus
Syt7-PB	327	CG2381-PB	102..321	73..304	200	23.9	Plus
Pkc53E-PD	525	CG6622-PD	24..126	261..366	200	40.6	Plus
Pkc53E-PF	670	CG6622-PF	169..271	261..366	200	40.6	Plus
Pkc53E-PA	670	CG6622-PA	169..271	261..366	200	40.6	Plus
Pkc53E-PE	678	CG6622-PE	177..279	261..366	200	40.6	Plus
Pkc53E-PC	678	CG6622-PC	177..279	261..366	200	40.6	Plus
Pkc53E-PB	679	CG6622-PB	178..280	261..366	200	40.6	Plus
Syt14-PC	586	CG9778-PC	294..583	120..394	187	21.5	Plus
Syt14-PA	586	CG9778-PA	294..583	120..394	187	21.5	Plus
Syt14-PD	648	CG9778-PD	294..583	120..394	187	21.5	Plus
Syt1-PG	331	CG3139-PG	162..315	234..381	179	30.8	Plus
Syt7-PB	327	CG2381-PB	132..252	242..365	177	37	Plus
Syt7-PI	345	CG2381-PI	132..252	242..365	177	37	Plus
Sytbeta-PC	546	CG42333-PC	285..543	117..392	177	24.3	Plus
Sytbeta-PD	602	CG3020-PA	341..599	117..392	177	24.3	Plus
Syt7-PI	345	CG2381-PI	102..344	73..324	171	22.2	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 19:35:01

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI15164-PA	724	GI15164-PA	319..724	9..401	1670	82.3	Plus
Dmoj\GI17907-PA	468	GI17907-PA	187..454	117..394	323	34	Plus
Dmoj\GI14040-PA	415	GI14040-PA	101..415	73..397	299	25.2	Plus
Dmoj\GI24109-PA	471	GI24109-PA	177..469	117..394	287	29	Plus
Dmoj\GI17929-PA	503	GI17929-PA	197..456	98..366	244	29.4	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 19:35:02

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL26904-PA	623	GL26904-PA	259..623	45..401	1612	87.1	Plus
Dper\GL26438-PA	473	GL26438-PA	192..459	117..394	323	34	Plus
Dper\GL18166-PA	414	GL18166-PA	100..414	73..397	287	25.2	Plus
Dper\GL12434-PA	482	GL12434-PA	188..480	117..394	283	28.7	Plus
Dper\GL23667-PA	3443	GL23667-PA	3107..3407	118..381	247	29.2	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 19:35:02

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA11064-PA	642	GA11064-PA	244..642	9..401	1811	89	Plus
Dpse\GA16224-PA	473	GA16224-PA	192..459	117..394	323	34	Plus
Dpse\GA22513-PA	288	GA22513-PA	20..288	117..397	285	26.5	Plus
Dpse\GA27501-PA	482	GA27501-PA	188..480	117..394	283	28.7	Plus
Dpse\GA26691-PE	593	GA26691-PE	257..556	118..380	252	29.3	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:35:03

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM11290-PA	638	GM11290-PA	238..638	1..401	2176	99.5	Plus
Dsec\GM18197-PA	474	GM18197-PA	193..460	117..394	323	34	Plus
Dsec\GM26786-PA	416	GM26786-PA	114..416	85..397	283	25.8	Plus
Dsec\GM10947-PA	470	GM10947-PA	176..468	117..394	278	28	Plus
Dsec\GM17249-PA	496	GM17249-PA	193..451	101..366	245	29.9	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 19:35:04

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD16016-PA	494	GD16016-PA	94..494	1..401	2164	99	Plus
Dsim\GD22802-PA	474	GD22802-PA	193..460	117..394	323	34	Plus
Dsim\GD19926-PA	474	GD19926-PA	180..472	117..394	277	28	Plus
Dsim\GD20399-PA	1467	GD20399-PA	1131..1431	118..381	240	28.2	Plus
Dsim\GD20399-PA	1467	GD20399-PA	1131..1253	261..394	210	37.8	Plus
Dsim\GD11233-PA	589	GD11233-PA	178..280	261..366	202	40.6	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 19:35:04

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ14870-PA	664	GJ14870-PA	258..664	6..401	1717	84.5	Plus
Dvir\GJ17415-PA	467	GJ17415-PA	186..453	117..394	323	34	Plus
Dvir\GJ12969-PA	415	GJ12969-PA	114..415	84..397	292	25.9	Plus
Dvir\GJ10932-PA	471	GJ10932-PA	177..469	117..394	287	29	Plus
Dvir\GJ22970-PA	2720	GJ22970-PA	2384..2684	118..381	245	29.2	Plus
Dvir\GJ22970-PA	2720	GJ22970-PA	2384..2506	261..394	210	37.8	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 19:35:05

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK10340-PA	652	GK10340-PA	242..652	9..401	1744	85.2	Plus
Dwil\GK18145-PA	474	GK18145-PA	193..460	117..394	324	34	Plus
Dwil\GK13680-PA	416	GK13680-PA	94..416	63..397	292	24.3	Plus
Dwil\GK12005-PA	978	GK12005-PA	196..480	117..386	267	28.1	Plus
Dwil\GK18165-PA	494	GK18165-PA	206..445	118..366	247	31.3	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:35:06

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE15375-PA	640	GE15375-PA	238..640	1..401	2137	97.5	Plus
Dyak\GE15027-PA	474	GE15027-PA	193..460	117..394	323	34	Plus
Dyak\GE14519-PA	416	GE14519-PA	102..416	75..397	288	26.4	Plus
Dyak\GE24918-PA	826	GE24918-PA	41..331	117..392	271	27.9	Plus
Dyak\GE12800-PA	496	GE12800-PA	193..451	101..366	243	29.9	Plus

Library:	RE
Tissue Source:	Drosophila melanogaster embryo
Created by:	Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:	2000-10-23
Comments:	Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:	320
Well:	27
Vector:	pFlc-1
Associated Gene/Transcript	Rph-RB
Protein status:	RE32027.pep: gold
Sequenced Size:	3410

Clone RE32027 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

RE32027.complete Sequence

RE32027.complete Blast Records

RE32027.complete Sim4 Records

RE32027.hyp Sequence

RE32027.hyp Blast Records

RE32027.pep Sequence

RE32027.pep Blast Records