BDGP Sequence Production Resources |
Search the DGRC for RE32166
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 321 |
Well: | 66 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Bug22-RA |
Protein status: | RE32166.pep: gold |
Preliminary Size: | 772 |
Sequenced Size: | 955 |
Gene | Date | Evidence |
---|---|---|
CG5343 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5343 | 2002-02-22 | Blastp of sequenced clone |
CG5343 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5343 | 2008-04-29 | Release 5.5 accounting |
CG5343 | 2008-08-15 | Release 5.9 accounting |
CG5343 | 2008-12-18 | 5.12 accounting |
955 bp (955 high quality bases) assembled on 2002-02-22
GenBank Submission: AY084152
> RE32166.complete ATTGTTATGGCAACAACAGGATGCCGTGCTAAACAAACTCATTGACATGA GAAAATAATCAAGTTCCGCATTGATGTTCGTAGTTTGTACGAGTTTCGGC TGTGCGAAAAATTTACGGCCAACCTTAACTGGCCCTATATAAATTTCGAA GAGACTATACTCTCCGTGGGGCGAACCGGTCACTGCACAGCAGTCGCGAA ATGTTCAAAAACACTTTCCAATCGGGATTCCTATCAATTCTGTACAGTAT TGGCTCAAAGCCACTGCAGCTGTGGGATAAGAAGGTGCGCAATGGACACA TCAAGCGGATCACCGACAACGACATACAAAGCCTCGTGTTGGAAATAGTC GGCACCAATGTCAGCACCACGTTCATAACATGTCCGGCAGATCCGAAGAA GACGCTGGGCATCAAGCTGCCCTTCCTGGTGATGATCATCAAGAACATGA AGAAGTACTTCACCTTCGAGGTTCAGGTTCTCGATGACAAGAACGTGCGG CGAAGGTTTAGGGCCAGTAACTACCAGTCGACAACTCGTGTCAAGCCTTT CATTTGCACCATGCCCATGCGATTGGACGAGGGATGGAACCAGATCCAGT TCAACCTGTCCGACTTCACGCGTCGCGCATACGGCACCAATTATGTGGAG ACACTCCGTGTACAGATTCATGCAAATTGCCGCATCAGACGCGTCTACTT CTCCGATCGTCTCTACTCGGAGGACGAGCTGCCGCCGGAGTTTAAGCTCT TCCTTCCCATTCAGAAGCCGGTGCAGAAGTCCAATGCGATTTGTAGCTAA ATTCTGTATGCATCATCAATCAATTAGAGCACCTAACCAGACGGAGTCGA CGATTAAAACGGCACAAAATGCACAAGACTGCCATCCAGCACTCATTCAA CACTTTATGGGAATCACGAATAAAAATTGCATCATGTACAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5343-RA | 1064 | CG5343-RA | 108..1052 | 1..945 | 4710 | 99.8 | Plus |
CG5188-RA | 1135 | CG5188-RA | 1029..1135 | 945..839 | 520 | 99 | Minus |
CG17118-RA | 987 | CG17118-RA | 425..496 | 581..652 | 225 | 87.5 | Plus |
CG17118-RA | 987 | CG17118-RA | 248..324 | 404..480 | 175 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10429271..10429748 | 478..1 | 2375 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 10428754..10429220 | 939..473 | 2335 | 100 | Minus |
chr2L | 23010047 | chr2L | 10729571..10729642 | 581..652 | 225 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10430437..10430914 | 478..1 | 2390 | 100 | Minus |
2L | 23513712 | 2L | 10429914..10430386 | 945..473 | 2350 | 99.8 | Minus |
2L | 23513712 | 2L | 10730802..10730873 | 581..652 | 225 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10430437..10430914 | 478..1 | 2390 | 100 | Minus |
2L | 23513712 | 2L | 10429914..10430386 | 945..473 | 2350 | 99.7 | Minus |
2L | 23513712 | 2L | 10730802..10730873 | 581..652 | 225 | 87.5 | Plus |
2L | 23513712 | 2L | 10730559..10730633 | 404..478 | 180 | 82.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10428754..10429216 | 477..939 | 100 | <- | Minus |
chr2L | 10429273..10429748 | 1..476 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5343-RA | 1..600 | 201..800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5343-RA | 1..600 | 201..800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5343-RA | 1..600 | 201..800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5343-RA | 1..600 | 201..800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bug22-RA | 1..600 | 201..800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5343-RA | 1..939 | 1..939 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5343-RA | 1..939 | 1..939 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5343-RA | 5..943 | 1..939 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5343-RA | 1..939 | 1..939 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bug22-RA | 5..943 | 1..939 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10429920..10430382 | 477..939 | 100 | <- | Minus |
2L | 10430439..10430914 | 1..476 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10429920..10430382 | 477..939 | 100 | <- | Minus |
2L | 10430439..10430914 | 1..476 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10429920..10430382 | 477..939 | 100 | <- | Minus |
2L | 10430439..10430914 | 1..476 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10429920..10430382 | 477..939 | 100 | <- | Minus |
arm_2L | 10430439..10430914 | 1..476 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10429920..10430382 | 477..939 | 100 | <- | Minus |
2L | 10430439..10430914 | 1..476 | 100 | Minus |
Translation from 200 to 799
> RE32166.pep MFKNTFQSGFLSILYSIGSKPLQLWDKKVRNGHIKRITDNDIQSLVLEIV GTNVSTTFITCPADPKKTLGIKLPFLVMIIKNMKKYFTFEVQVLDDKNVR RRFRASNYQSTTRVKPFICTMPMRLDEGWNQIQFNLSDFTRRAYGTNYVE TLRVQIHANCRIRRVYFSDRLYSEDELPPEFKLFLPIQKPVQKSNAICS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14097-PA | 199 | GF14097-PA | 1..199 | 1..199 | 1061 | 100 | Plus |
Dana\GF15822-PA | 272 | GF15822-PA | 1..183 | 1..183 | 674 | 63.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23930-PA | 199 | GG23930-PA | 1..199 | 1..199 | 1061 | 100 | Plus |
Dere\GG23671-PA | 277 | GG23671-PA | 1..184 | 1..184 | 669 | 62.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13299-PA | 199 | GH13299-PA | 1..199 | 1..199 | 1061 | 100 | Plus |
Dgri\GH10426-PA | 269 | GH10426-PA | 1..184 | 1..184 | 671 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Bug22-PA | 199 | CG5343-PA | 1..199 | 1..199 | 1042 | 100 | Plus |
CG17118-PA | 281 | CG17118-PA | 1..183 | 1..183 | 642 | 62.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18163-PA | 199 | GI18163-PA | 1..199 | 1..199 | 1061 | 100 | Plus |
Dmoj\GI23484-PA | 271 | GI23484-PA | 1..184 | 1..184 | 675 | 62.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18997-PA | 199 | GL18997-PA | 1..199 | 1..199 | 1024 | 97 | Plus |
Dper\GL26630-PA | 274 | GL26630-PA | 1..184 | 1..184 | 680 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14331-PA | 274 | GA14331-PA | 1..184 | 1..184 | 680 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11664-PA | 199 | GM11664-PA | 1..199 | 1..199 | 1061 | 100 | Plus |
Dsec\GM18720-PA | 281 | GM18720-PA | 1..184 | 1..184 | 664 | 62.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22257-PA | 199 | GD22257-PA | 1..199 | 1..199 | 1061 | 100 | Plus |
Dsim\GD23728-PA | 232 | GD23728-PA | 1..135 | 50..184 | 501 | 64.4 | Plus |
Dsim\GD11616-PA | 246 | GD11616-PA | 1..192 | 1..191 | 501 | 50.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14593-PA | 199 | GJ14593-PA | 1..199 | 1..199 | 1055 | 99.5 | Plus |
Dvir\GJ20690-PA | 273 | GJ20690-PA | 1..184 | 1..184 | 678 | 64.7 | Plus |
Translation from 200 to 799
> RE32166.hyp MFKNTFQSGFLSILYSIGSKPLQLWDKKVRNGHIKRITDNDIQSLVLEIV GTNVSTTFITCPADPKKTLGIKLPFLVMIIKNMKKYFTFEVQVLDDKNVR RRFRASNYQSTTRVKPFICTMPMRLDEGWNQIQFNLSDFTRRAYGTNYVE TLRVQIHANCRIRRVYFSDRLYSEDELPPEFKLFLPIQKPVQKSNAICS*