Clone RE32343 Report

Search the DGRC for RE32343

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:323
Well:43
Vector:pFlc-1
Associated Gene/Transcriptcsw-RB
Protein status:RE32343.pep: gold
Sequenced Size:5453

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
csw-RB 2012-09-07 Manual selection by Sue Celniker

Clone Sequence Records

RE32343.complete Sequence

5453 bp assembled on 2013-01-26

GenBank Submission: BT149891.1

> RE32343.complete
ATTCTCGAGTTGTGATCCAACGGGTTAGCAGCTCAGCTCGCAAGCAGTCG
CCGTTCGTCGTCGAGCGGCAAGCAGTTCGTTTCATTTCTACTGGGCGCCA
GTACAAGTTCCATCGAGTGTTTTTGTTATTCGAAGGCAAAGCGCGAAAAT
TATGCCTTCAGCCACATTTGTCCTGGAGCATTTGATGGCGGCACAATCGC
GACTCGACGAGCAGGCCGCATCCCCAGCAGAGGTCAAACCCACCAGCACC
ATCAACAGCAGCAGCACCACCGTGGCCAAGGCCATCAATGTCAAGTCGTA
CGAAAAGAAGCTGTTGCTGGCTCTCAAGAAGATTGTGCAATAATAAACGA
ATGCGGGGTAAACAGCACTCTATTTGACAAACTGTAGACATTTCCCCTAA
TCGAGCTGACTAAGATCAATAAAAAGCAAACAGAGAAGCACAACAAACAG
CGGCAAAAAACAAAAACCAAGAATTCTAGTTTTTGTGCTTTCAGTGTGTG
TTCGTGTGTGTGGGCAAGTTGTTACATAAAACAAAAACAATAACAAAATA
AAAAAAAAATAATAAAAAAACACCCCAGCCGAGACGCATTTTTCCGCAGT
GGAATACTACTATCTAAGCTTCTTTTTGTTTTGGTGTGTGCGAGAAAACG
AGTGTGAAGAAAATGCTGTTCAACAAATGTCTGGAAAAGTTGTCCAGCTC
GCTGGGCAATGTGGTCAATCACAAGCTGCAAGAGAAACAAGTCTACAACA
ACAACAATATCAACAATAACAATAACAATACGCTAAACAACAACAATGCC
TACAACAATCAGCGAAACTTTGAGTACGAAAGAGCCATACAGGCGCACTA
CGGAAGCAAGGGAAGACGCTCGGAGGAGCGCGAAAGGAGCGGCAAGTTCA
AGGCCAGCAAGGGTCGGAAAGCAAAGGTCACCCCACCAACGGAGACACCC
GAGGCCCAGGAGCCGGCCTGCAAGAACTGTATGACCCACGACGAGCTGGC
CCAGATCATAAAGGGCGTGGCCAAGGGCGCTGACGCGCAACGTAATCGAG
ACAACCGACTGCAGCGCAGACGTCGTCCTCTCTCCGCCCAACCCTCCGCC
GCTGCCTCCGCCTCCACATCGACGGAATCTCTGCACCGTCTTACACCCAG
CCCGCAGGCTTCCTACCCGGCCACGCCCACCTCCTGGACAGCCACACCGC
CCCAGTTCCCAGCCGCCTTCGGCGGCGCCAGCTGCTCCAACAGCACACTG
TCCCTCTTGGCCACCATGCGCGTCCAGCTCCATGGTTACACATGGTTTCA
TGGCAATCTTTCCGGAAAGGAAGCGGAAAAATTGATCCTGGAGCGGGGCA
AGAATGGTTCGTTTCTCGTCCGTGAATCTCAGAGCAAGCCTGGCGACTTC
GTCCTTTCCGTGCGCACGGACGACAAAGTAACGCATGTCATGATTCGATG
GCAGGACAAGAAGTACGACGTCGGCGGCGGGGAATCCTTTGGCACCTTGT
CGGAACTGATCGATCACTACAAGCGTAATCCCATGGTGGAGACGTGCGGA
ACCGTGGTGCATCTGCGACAGCCATTCAACGCCACACGAATCACGGCGGC
CGGCATCAATGCCCGGGTGGAACAGCTGGTCAAGGGAGGTTTCTGGGAGG
AATTCGAATCGCTGCAACAGGACAGTCGGGACACATTCTCGCGCAACGAG
GGCTACAAACAGGAGAACCGCCTCAAGAATCGCTACCGCAACATATTGCC
ATACGACCACACGCGCGTCAAGCTGCTGGACGTGGAGCATAGCGTGGCCG
GAGCCGAGTACATCAATGCCAACTACATACGGCTGCCCACCGACGGCGAC
CTGTACAACATGAGCAGCTCGTCGGAGAGCCTGAACAGCTCGGTGCCCTC
GTGCCCCGCCTGCACGGCTGCCCAGACACAGCGGAACTGCTCCAACTGCC
AGCTGCAAAACAAGACGTGCGTGCAGTGCGCCGTGAAGAGCGCCATTCTG
CCGTATAGCAACTGTGCCACCTGCAGCCGCAAGTCAGACTCCCTGAGCAA
GCACAAGCGGAGCGAATCCTCGGCCTCTTCATCGCCCTCCTCCGGCTCTG
GGTCCGGACCAGGATCGTCGGGCACCAGCGGAGTGAGCAGCGTCAATGGA
CCCGGCACACCCACCAATCTCACGAGCGGCACAGCCGGATGTCTGGTCGG
CCTGCTGAAGAGACACTCGAACGACTCGTCCGGAGCTGTTTCTATATCGA
TGGCCGAACGGGAACGCGAGAGGGAGCGCGAGATGTTTAAGACCTACATC
GCCACCCAGGGCTGTCTGCTCACCCAGCAAGTGAACACGGTGACGGACTT
CTGGAACATGGTCTGGCAGGAGAACACGCGGGTGATCGTCATGACCACCA
AGGAGTACGAGCGCGGCAAAGAAAAGTGCGCCCGCTACTGGCCGGACGAG
GGTAGATCGGAGCAGTTCGGCCACGCGCGGATACAGTGCGTCTCGGAGAA
CTCGACCAGTGACTATACGCTGCGCGAGTTCCTCGTCTCGTGGCGGGATC
AGCCGGCGCGCCGGATCTTTCACTACCATTTCCAGGTGTGGCCGGATCAC
GGAGTGCCCGCCGATCCGGGCTGTGTGCTCAACTTCCTGCAAGATGTCAA
CACGCGTCAGAGTCACCTGGCTCAAGCGGGCGAGAAGCCGGGTCCGATCT
GCGTGCACTGCTCTGCGGGCATCGGTCGCACTGGCACCTTTATTGTGATC
GATATGATTCTCGATCAGATTGTGCGCAATGGATTGGATACTGAAATCGA
CATCCAGCGCACCATTCAGATGGTCCGATCGCAGCGTTCCGGTCTTGTGC
AAACCGAGGCGCAATACAAGTTCGTCTACTATGCGGTGCAGCACTATATA
CAGACCCTGATCGCCCGGAAACGAGCTGAGGAGCAGAGCCTGCAGGTTGG
CCGCGAGTACACCAATATAAAGTACACGGGCGAAATTGGAAACGATTCAC
AAAGATCTCCATTACCACCAGCAATTTCTAGCATAAGTTTAGTTCCGAGT
AAGACGCCACTGACGCCGACATCGGCGGATTTGGGCACTGGGATGGGCCT
AAGCATGGGCGTGGGCATGGGCGTCGGCAACAAGCACGCATCGAAGCAGC
AGCCGCCGTTGCCGGTGGTCAACTGCAACAATAATAACAACGGCATTGGC
AATAGCGGCTGCAGCAACGGCGGCGGGAGCAGCACCACCAGCAGCAGCAA
CGGCAGCAGCAACGGTAACATCAACGCCCTACTGGGCGGCATCGGCTTGG
GGCTGGGCGGCAATATGCGCAAGTCGAACTTTTACAGCGACTCGCTGAAG
CAGCAACAGCAGCGCGAGGAGCAGGCTCCGGCGGGAGCAGGTAAGATGCA
GCAGCCGGCGCCGCCGCTGCGACCGCGTCCTGGAATACTCAAGTTGCTCA
CCAGTCCCGTCATCTTTCAGCAAAATTCAAAAACATTCCCAAAGACATGA
TCGGCTTGCGACCGCCAAGCCATGCGCCTGCGTTGCCGCCGCCACCGACA
CCGCCGCGCAAAACATGACAAATGAATTTCTAAGTCGCGACGCCCCCTTG
ACACGCCCCCTTGACACGCCCCCCTGACACCCACCTCCCTCCACACGCAC
ACAGACCACATATGGTTTTCATTTTAAATGTCACCCAGCCGCCGCCCCAA
ACCCAAAACCCAATCCCTCGACTATGTTTTACTGTTGTACCACGTTCTAC
GTTTTTTTTTTTTTTTTATAATTGTAATCTATATACTTTTTTGTAATTGT
GTGTAATGTAATGTTTAGTTTTATGTTATTGTCTCGCTTTATGTTGTAAG
TGTTCCCTGCACACGAAAAGCAGTAACCCCACCACCACCCCAAAACCCAA
AACCCAGCATATTTATGTAGTAGTATTGTAAGAATCCCCGAACCGGTAGT
TGAGGATACAATCTGGGCGGAACTGCAGCAGATCCGCCAAAAAACAAAAA
CACATTTTTAAGCAGAATCGCAGCAACAAAATATAACACCCGTTCCCTGT
TCCAAACCGCTTGAATTTGGTGGAATCGGCCTTGATAGTATTTCACTTTC
TTGAAAATATTCGCTTTAGATAAGAAAATTGACTTGTGACAAATATTTAC
ATGTATTGCGCTGGTTACAAACCACAAAAGTTGCTTAACTTTAAATTTTA
CGAATCGACATTTATGATATTTCGCATGCTTGAAAATAGTTGTAGTTTCC
TATTTGGGAATCATTGAAAAATCCATTTATAAAGCGAAATCCAGTTCTGG
CACGTTCAATTTGAATCGGTTAATTTCTAATCTAGTTGGCGAAAAAGTGA
AGAAAAGTGAAGTCCACCTCCTCCAAATTCAACTTGAAACGGAAACGGGT
TACCGGTTGGAGTGCAAATAAAGTTTTTAGTGTAGTAAGTGTTGACAAAA
TCGATAGAGAAGAAATTAGAGGAGTAACTGAGGCAGTAAGCACGTAACGA
TAATGATACAAAAAGCGTTGATTGTGATTCGAGTGACAGCGAGAACAGAA
ACTGAAACAGTAACAGTAACAGTAACAGATGAGAACAGATGCGAATGGGA
TCAGTACAGAACAGAACAGAACAGCGGAGACGCCAACCGAACAGAACAGA
AATGAACAGAAGAGAAGAGAACAGATTAGAGGTAAAAGAAAAAGCTAAGA
AGCGCTTAAGCGTGTCGTCCCTAGAATAAGAAAACTAATATTACAGCTCC
ACAGATCCAGATTCAGATCCAGATCTATATCTCTAGCAGCCAATTTCTGA
TTTCCCCTTCCCTCTTAGTTTTCCCATTAATTTAGTGATTGTGTGTATAT
TTTTAATTGTATATTGAAGATTATTTATAGCGATTGTCCATTGTGTTACA
TTTCAAATGTTCGAAAGAATTGTATTTAGAAAGTTTGTACTTTAGAAATT
ATGCATTAATTGTGTGTCTGTGTCTCTCTACCCAGTCTCCCTATCTCTGT
CTCTCTCTCTCTCTCTCCCTCACTGTCTATGCACGAGTGTTTTCTTAACT
AAGTTTATTATTTCAACGCTGAAGCGTAATCAAACTATATATGCAATATT
TAAGCACAGTACCTTGGGCGCTGCAAAGAAATTAAAAAATTTTAAAATAA
AAACAAACTGCTAAATCATAAATACAAAATATATACAGGAAGGAATAATA
GCAGCGAAATGTAAATCAATTAGATTATTGTGCAAATTTGAGTAATATAT
TTAAAACATACCCTTATTTTATCTTATTTAACTTTATGCTTTTGTAAGTG
CTTTAAATTGTTATTCATCTTGATCTTGCAAAAAAATGAAAAAACCACAA
AACTGAAAAACGAATACAAAACTAAAAAACAACACAAATTATATTTGTAT
TTATACAGAAAAATAAAACATTTTATATGCGATACACGAAAAAAAAAAAA
AAA

RE32343.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:06:18
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 2005131..2007597 2972..5438 12335 100 Plus
chrX 22417052 chrX 1996399..1997689 1..1291 6455 100 Plus
chrX 22417052 chrX 2003651..2004593 1749..2691 4700 99.9 Plus
chrX 22417052 chrX 2004875..2005067 2781..2973 965 100 Plus
chrX 22417052 chrX 2003153..2003341 1447..1635 930 99.5 Plus
chrX 22417052 chrX 2002306..2002469 1292..1455 820 100 Plus
chrX 22417052 chrX 2003407..2003526 1633..1752 600 100 Plus
chrX 22417052 chrX 2004670..2004762 2690..2782 465 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:06:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2111205..2113672 2972..5439 12340 100 Plus
X 23542271 X 2102485..2103775 1..1291 6455 100 Plus
X 23542271 X 2109725..2110667 1749..2691 4700 99.9 Plus
X 23542271 X 2110949..2111141 2781..2973 965 100 Plus
X 23542271 X 2109227..2109415 1447..1635 930 99.5 Plus
X 23542271 X 2108380..2108543 1292..1455 820 100 Plus
X 23542271 X 2109481..2109600 1633..1752 600 100 Plus
X 23542271 X 2110744..2110836 2690..2782 465 100 Plus
Blast to na_te.dros performed 2019-03-15 14:06:16
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy7 5486 gypsy7 GYPSY7 5486bp 4944..5119 5126..5297 160 57.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6758 3237..3275 141 84.6 Plus
roo 9092 roo DM_ROO 9092bp 1050..1151 175..271 137 63.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6824 188..271 135 66.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2458..2611 210..367 131 56.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6712..6749 234..271 127 81.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2786..2860 215..293 124 65.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6798..6860 210..271 123 70.3 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3252..3382 3144..3274 123 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..6857 215..317 122 60.2 Plus
roo 9092 roo DM_ROO 9092bp 1046..1130 194..271 121 64.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2275..2382 159..271 120 61.4 Plus

RE32343.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:07:18 Download gff for RE32343.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 1996399..1997689 1..1291 93 -> Plus
chrX 2002306..2002468 1292..1454 100 -> Plus
chrX 2003161..2003340 1455..1634 100 -> Plus
chrX 2003409..2003526 1635..1752 100 -> Plus
chrX 2003655..2004592 1753..2690 100 -> Plus
chrX 2004671..2004761 2691..2781 100 -> Plus
chrX 2004876..2005065 2782..2971 100 -> Plus
chrX 2005131..2005333 2972..3174 100 == Plus
chrX 2005435..2006760 3276..4601 98 == Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-01-26 11:31:08 Download gff for RE32343.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RB 1..2838 663..3500 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:18:34 Download gff for RE32343.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RB 1..2838 663..3500 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:50:26 Download gff for RE32343.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RB 1..2838 663..3500 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-26 11:31:08 Download gff for RE32343.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RB 1..4769 663..5431 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:18:34 Download gff for RE32343.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RB 197..5634 1..5438 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:50:26 Download gff for RE32343.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RB 197..5634 1..5438 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:18 Download gff for RE32343.complete
Subject Subject Range Query Range Percent Splice Strand
X 2102485..2103775 1..1291 100 -> Plus
X 2108380..2108542 1292..1454 100 -> Plus
X 2109235..2109414 1455..1634 100 -> Plus
X 2109483..2109600 1635..1752 100 -> Plus
X 2109729..2110666 1753..2690 100 -> Plus
X 2110745..2110835 2691..2781 100 -> Plus
X 2110950..2111139 2782..2971 100 -> Plus
X 2111205..2113671 2972..5438 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:18 Download gff for RE32343.complete
Subject Subject Range Query Range Percent Splice Strand
X 2102485..2103775 1..1291 100 -> Plus
X 2108380..2108542 1292..1454 100 -> Plus
X 2109235..2109414 1455..1634 100 -> Plus
X 2109483..2109600 1635..1752 100 -> Plus
X 2109729..2110666 1753..2690 100 -> Plus
X 2110745..2110835 2691..2781 100 -> Plus
X 2110950..2111139 2782..2971 100 -> Plus
X 2111205..2113671 2972..5438 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:18 Download gff for RE32343.complete
Subject Subject Range Query Range Percent Splice Strand
X 2102485..2103775 1..1291 100 -> Plus
X 2108380..2108542 1292..1454 100 -> Plus
X 2109235..2109414 1455..1634 100 -> Plus
X 2109483..2109600 1635..1752 100 -> Plus
X 2109729..2110666 1753..2690 100 -> Plus
X 2110745..2110835 2691..2781 100 -> Plus
X 2110950..2111139 2782..2971 100 -> Plus
X 2111205..2113671 2972..5438 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:18:34 Download gff for RE32343.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1996518..1997808 1..1291 100 -> Plus
arm_X 2002413..2002575 1292..1454 100 -> Plus
arm_X 2003268..2003447 1455..1634 100 -> Plus
arm_X 2003516..2003633 1635..1752 100 -> Plus
arm_X 2003762..2004699 1753..2690 100 -> Plus
arm_X 2004778..2004868 2691..2781 100 -> Plus
arm_X 2004983..2005172 2782..2971 100 -> Plus
arm_X 2005238..2007704 2972..5438 100   Plus

RE32343.pep Sequence

Translation from 662 to 3499

> RE32343.pep
MLFNKCLEKLSSSLGNVVNHKLQEKQVYNNNNINNNNNNTLNNNNAYNNQ
RNFEYERAIQAHYGSKGRRSEERERSGKFKASKGRKAKVTPPTETPEAQE
PACKNCMTHDELAQIIKGVAKGADAQRNRDNRLQRRRRPLSAQPSAAASA
STSTESLHRLTPSPQASYPATPTSWTATPPQFPAAFGGASCSNSTLSLLA
TMRVQLHGYTWFHGNLSGKEAEKLILERGKNGSFLVRESQSKPGDFVLSV
RTDDKVTHVMIRWQDKKYDVGGGESFGTLSELIDHYKRNPMVETCGTVVH
LRQPFNATRITAAGINARVEQLVKGGFWEEFESLQQDSRDTFSRNEGYKQ
ENRLKNRYRNILPYDHTRVKLLDVEHSVAGAEYINANYIRLPTDGDLYNM
SSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAILPYSN
CATCSRKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTP
TNLTSGTAGCLVGLLKRHSNDSSGAVSISMAEREREREREMFKTYIATQG
CLLTQQVNTVTDFWNMVWQENTRVIVMTTKEYERGKEKCARYWPDEGRSE
QFGHARIQCVSENSTSDYTLREFLVSWRDQPARRIFHYHFQVWPDHGVPA
DPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMIL
DQIVRNGLDTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQTLI
ARKRAEEQSLQVGREYTNIKYTGEIGNDSQRSPLPPAISSISLVPSKTPL
TPTSADLGTGMGLSMGVGMGVGNKHASKQQPPLPVVNCNNNNNGIGNSGC
SNGGGSSTTSSSNGSSNGNINALLGGIGLGLGGNMRKSNFYSDSLKQQQQ
REEQAPAGAGKMQQPAPPLRPRPGILKLLTSPVIFQQNSKTFPKT*

RE32343.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:09:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21460-PA 985 GF21460-PA 1..961 1..928 3247 73.8 Plus
Dana\GF14429-PA 2028 GF14429-PA 1802..2020 512..746 402 36.9 Plus
Dana\GF22421-PA 874 GF22421-PA 649..851 545..745 398 41 Plus
Dana\GF19443-PA 1997 GF19443-PA 1373..1587 543..777 390 36.4 Plus
Dana\GF23342-PA 1249 GF23342-PA 559..749 545..742 373 38 Plus
Dana\GF14429-PA 2028 GF14429-PA 1541..1729 545..746 350 38 Plus
Dana\GF23342-PA 1249 GF23342-PA 841..981 542..696 166 26.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:09:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12908-PA 965 GG12908-PA 1..937 1..913 3834 89.9 Plus
Dere\GG18966-PA 833 GG18966-PA 608..810 545..745 397 41 Plus
Dere\GG21203-PA 2028 GG21203-PA 1802..2020 512..746 394 36 Plus
Dere\GG18436-PA 1978 GG18436-PA 1339..1550 543..774 387 36.5 Plus
Dere\GG11662-PA 1234 GG11662-PA 517..760 502..757 373 34.6 Plus
Dere\GG21203-PA 2028 GG21203-PA 1541..1729 545..746 349 38 Plus
Dere\GG11662-PA 1234 GG11662-PA 834..974 542..696 164 26.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24579-PA 1030 GH24579-PA 1..879 1..828 2893 67.5 Plus
Dgri\GH13826-PA 2039 GH13826-PA 1813..2031 512..746 399 36.4 Plus
Dgri\GH12435-PA 837 GH12435-PA 612..814 545..745 395 40.5 Plus
Dgri\GH12596-PA 1990 GH12596-PA 1355..1533 543..735 381 39.4 Plus
Dgri\GH14309-PA 1250 GH14309-PA 552..742 545..742 373 38.5 Plus
Dgri\GH13826-PA 2039 GH13826-PA 1552..1736 545..742 351 38.7 Plus
Dgri\GH14309-PA 1250 GH14309-PA 834..974 542..696 159 26.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:32
Subject Length Description Subject Range Query Range Score Percent Strand
csw-PB 945 CG3954-PB 1..945 1..945 4968 100 Plus
csw-PD 894 CG3954-PD 164..892 211..922 3687 96.7 Plus
csw-PA 841 CG3954-PA 111..839 211..922 3687 96.7 Plus
csw-PC 682 CG3954-PC 1..680 260..922 3432 96.5 Plus
Ptp10D-PG 1990 CG1817-PG 1339..1688 543..910 383 30 Plus
Ptp10D-PF 1990 CG1817-PF 1339..1688 543..910 383 30 Plus
Ptpmeg2-PH 498 CG32697-PH 273..475 545..745 381 41 Plus
Ptpmeg2-PI 498 CG32697-PI 273..475 545..745 381 41 Plus
Ptpmeg2-PE 498 CG32697-PE 273..475 545..745 381 41 Plus
Ptpmeg2-PD 498 CG32697-PD 273..475 545..745 381 41 Plus
Ptpmeg2-PF 597 CG32697-PF 372..574 545..745 381 41 Plus
Ptpmeg2-PG 790 CG32697-PG 565..767 545..745 381 41 Plus
Ptpmeg2-PC 797 CG32697-PC 572..774 545..745 381 41 Plus
Ptpmeg2-PB 802 CG32697-PB 577..779 545..745 381 41 Plus
Ptpmeg2-PA 827 CG32697-PA 602..804 545..745 381 41 Plus
Lar-PD 1912 CG10443-PD 1692..1904 518..746 372 36.1 Plus
Lar-PH 1927 CG10443-PH 1707..1919 518..746 372 36.1 Plus
Lar-PG 1935 CG10443-PG 1715..1927 518..746 372 36.1 Plus
Lar-PI 1941 CG10443-PI 1721..1933 518..746 372 36.1 Plus
Lar-PB 2011 CG10443-PB 1791..2003 518..746 372 36.1 Plus
Lar-PA 2029 CG10443-PA 1809..2021 518..746 372 36.1 Plus
Lar-PF 2032 CG10443-PF 1812..2024 518..746 372 36.1 Plus
Ptp10D-PB 1631 CG1817-PB 1339..1550 543..774 364 35.6 Plus
Ptp10D-PH 1653 CG1817-PH 1361..1572 543..774 364 35.6 Plus
Ptp10D-PI 1558 CG1817-PI 1339..1540 543..765 360 35.9 Plus
Ptp10D-PE 1558 CG1817-PE 1339..1540 543..765 360 35.9 Plus
Ptp99A-PG 922 CG11516-PG 173..424 545..802 356 32.7 Plus
Ptp99A-PA 1226 CG11516-PA 548..799 545..802 356 32.7 Plus
Ptp99A-PC 1241 CG11516-PC 563..814 545..802 356 32.7 Plus
Ptp99A-PB 1297 CG11516-PB 548..799 545..802 356 32.7 Plus
Ptp99A-PF 1397 CG11516-PF 719..970 545..802 356 32.7 Plus
Ptp61F-PC 530 CG9181-PC 73..361 514..829 343 31.1 Plus
Ptp61F-PB 535 CG9181-PB 78..366 514..829 343 31.1 Plus
Ptp61F-PA 548 CG9181-PA 78..366 514..829 343 31.1 Plus
Ptp4E-PB 1607 CG6899-PB 1396..1578 543..739 343 37.1 Plus
Ptp4E-PG 1615 CG6899-PG 1396..1578 543..739 343 37.1 Plus
Ptp4E-PH 1761 CG6899-PH 1396..1578 543..739 343 37.1 Plus
Ptp4E-PF 1767 CG6899-PF 1396..1578 543..739 343 37.1 Plus
Ptp4E-PD 1767 CG6899-PD 1396..1578 543..739 343 37.1 Plus
Ptp4E-PC 1767 CG6899-PC 1396..1578 543..739 343 37.1 Plus
Ptp4E-PA 1767 CG6899-PA 1396..1578 543..739 343 37.1 Plus
IA-2-PD 1306 CG31795-PD 1018..1213 545..750 338 37 Plus
IA-2-PE 1318 CG31795-PE 1030..1225 545..750 338 37 Plus
IA-2-PC 1319 CG31795-PC 1031..1226 545..750 338 37 Plus
Lar-PD 1912 CG10443-PD 1425..1609 545..742 329 38.7 Plus
Lar-PH 1927 CG10443-PH 1440..1624 545..742 329 38.7 Plus
Lar-PG 1935 CG10443-PG 1448..1632 545..742 329 38.7 Plus
Lar-PI 1941 CG10443-PI 1454..1638 545..742 329 38.7 Plus
Lar-PB 2011 CG10443-PB 1524..1708 545..742 329 38.7 Plus
Lar-PA 2029 CG10443-PA 1542..1726 545..742 329 38.7 Plus
Lar-PF 2032 CG10443-PF 1545..1729 545..742 329 38.7 Plus
Ptp69D-PB 1461 CG10975-PB 959..1152 543..742 329 34.8 Plus
Ptp69D-PA 1462 CG10975-PA 960..1153 543..742 329 34.8 Plus
Ptp52F-PB 1433 CG18243-PB 1164..1356 543..752 308 36 Plus
Ptp61F-PE 431 CG9181-PE 1..249 566..829 295 30 Plus
Ptp61F-PD 431 CG9181-PD 1..249 566..829 295 30 Plus
Ptpmeg-PK 974 CG1228-PK 711..951 545..738 292 32.5 Plus
Ptpmeg-PJ 974 CG1228-PJ 711..951 545..738 292 32.5 Plus
Ptp69D-PB 1461 CG10975-PB 1266..1449 558..745 230 29.3 Plus
Ptp69D-PA 1462 CG10975-PA 1267..1450 558..745 230 29.3 Plus
csw-PD 894 CG3954-PD 59..153 211..304 222 48.4 Plus
csw-PA 841 CG3954-PA 6..100 211..304 222 48.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:09:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15283-PA 952 GI15283-PA 161..895 166..894 2746 72.2 Plus
Dmoj\GI14758-PA 799 GI14758-PA 574..776 545..745 403 41.4 Plus
Dmoj\GI20182-PA 2025 GI20182-PA 1799..2017 512..746 402 36.9 Plus
Dmoj\GI16226-PA 1656 GI16226-PA 1358..1536 543..735 380 39.4 Plus
Dmoj\GI10407-PA 1342 GI10407-PA 573..781 545..757 371 36.8 Plus
Dmoj\GI20182-PA 2025 GI20182-PA 1538..1726 545..746 350 38 Plus
Dmoj\GI15283-PA 952 GI15283-PA 6..114 211..318 218 42.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:09:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18228-PA 995 GL18228-PA 1..949 1..913 3373 75.2 Plus
Dper\GL26255-PA 2029 GL26255-PA 1802..2020 512..746 404 36.9 Plus
Dper\GL13110-PA 906 GL13110-PA 260..471 543..774 385 36.5 Plus
Dper\GL13888-PA 1213 GL13888-PA 540..748 545..757 376 37.2 Plus
Dper\GL15029-PA 915 GL15029-PA 553..764 543..774 370 34.5 Plus
Dper\GL26255-PA 2029 GL26255-PA 1541..1725 545..742 351 38.7 Plus
Dper\GL13888-PA 1213 GL13888-PA 794..962 509..696 166 25.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:09:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27851-PA 981 GA27851-PA 1..935 1..913 3269 73.5 Plus
Dpse\GA28096-PA 2029 GA28096-PA 1802..2020 512..746 404 36.9 Plus
Dpse\GA22312-PA 850 GA22312-PA 625..827 545..745 396 41 Plus
Dpse\GA14821-PA 1955 GA14821-PA 1312..1523 543..774 386 36.5 Plus
Dpse\GA30065-PC 1248 GA30065-PC 542..750 545..757 377 37.2 Plus
Dpse\GA28096-PA 2029 GA28096-PA 1541..1725 545..742 351 38.7 Plus
Dpse\GA30065-PC 1248 GA30065-PC 796..964 509..696 166 25.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:09:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19198-PA 939 GM19198-PA 1..937 1..922 4846 96.3 Plus
Dsec\GM11354-PA 802 GM11354-PA 577..779 545..745 396 41 Plus
Dsec\GM17375-PA 598 GM17375-PA 372..593 512..749 395 35.6 Plus
Dsec\GM13099-PA 1977 GM13099-PA 1340..1551 543..774 388 36.5 Plus
Dsec\GM12786-PA 1230 GM12786-PA 548..756 545..757 372 36.8 Plus
Dsec\GM12786-PA 1230 GM12786-PA 830..970 542..696 165 26.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:09:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24731-PA 366 GD24731-PA 1..362 1..364 1937 98.9 Plus
Dsim\csw-PA 248 GD16586-PA 1..248 698..945 1295 99.2 Plus
Dsim\GD24230-PA 2043 GD24230-PA 1817..2035 512..746 393 36 Plus
Dsim\GD21436-PA 878 GD21436-PA 548..738 545..742 372 38 Plus
Dsim\GD16715-PA 1759 GD16715-PA 1401..1597 543..760 370 35.8 Plus
Dsim\GD24230-PA 2043 GD24230-PA 1556..1744 545..746 349 38 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:09:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\csw-PA 994 GJ16938-PA 1..837 1..834 2935 70.4 Plus
Dvir\GJ13567-PA 2025 GJ13567-PA 1799..2017 512..746 402 36.9 Plus
Dvir\GJ19159-PA 858 GJ19159-PA 633..835 545..745 398 40.5 Plus
Dvir\GJ15918-PA 1825 GJ15918-PA 1351..1529 543..735 381 39.4 Plus
Dvir\GJ14521-PA 1162 GJ14521-PA 455..645 545..742 374 38.5 Plus
Dvir\GJ13567-PA 2025 GJ13567-PA 1538..1726 545..746 349 38 Plus
Dvir\GJ14521-PA 1162 GJ14521-PA 737..877 542..696 160 26.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:09:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25739-PA 983 GK25739-PA 1..864 1..834 3126 77.3 Plus
Dwil\GK14922-PA 2033 GK14922-PA 1807..2025 512..746 399 36.4 Plus
Dwil\GK25577-PA 828 GK25577-PA 603..805 545..745 395 41 Plus
Dwil\GK25195-PA 1635 GK25195-PA 1338..1539 543..765 384 36.8 Plus
Dwil\GK19778-PA 1725 GK19778-PA 1389..1585 543..760 372 36.7 Plus
Dwil\GK14922-PA 2033 GK14922-PA 1546..1734 545..746 350 38 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:09:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16236-PA 966 GE16236-PA 1..938 1..913 3797 89.1 Plus
Dyak\GE15440-PA 830 GE15440-PA 605..807 545..745 397 41 Plus
Dyak\GE13277-PA 2028 GE13277-PA 1802..2020 512..746 394 36 Plus
Dyak\GE15658-PA 1970 GE15658-PA 1339..1550 543..774 388 36.5 Plus
Dyak\GE23851-PA 1245 GE23851-PA 560..750 545..742 373 38 Plus
Dyak\GE13277-PA 2028 GE13277-PA 1541..1729 545..746 350 38 Plus
Dyak\GE23851-PA 1245 GE23851-PA 842..982 542..696 164 26.3 Plus

RE32343.hyp Sequence

Translation from 662 to 3499

> RE32343.hyp
MLFNKCLEKLSSSLGNVVNHKLQEKQVYNNNNINNNNNNTLNNNNAYNNQ
RNFEYERAIQAHYGSKGRRSEERERSGKFKASKGRKAKVTPPTETPEAQE
PACKNCMTHDELAQIIKGVAKGADAQRNRDNRLQRRRRPLSAQPSAAASA
STSTESLHRLTPSPQASYPATPTSWTATPPQFPAAFGGASCSNSTLSLLA
TMRVQLHGYTWFHGNLSGKEAEKLILERGKNGSFLVRESQSKPGDFVLSV
RTDDKVTHVMIRWQDKKYDVGGGESFGTLSELIDHYKRNPMVETCGTVVH
LRQPFNATRITAAGINARVEQLVKGGFWEEFESLQQDSRDTFSRNEGYKQ
ENRLKNRYRNILPYDHTRVKLLDVEHSVAGAEYINANYIRLPTDGDLYNM
SSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAILPYSN
CATCSRKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTP
TNLTSGTAGCLVGLLKRHSNDSSGAVSISMAEREREREREMFKTYIATQG
CLLTQQVNTVTDFWNMVWQENTRVIVMTTKEYERGKEKCARYWPDEGRSE
QFGHARIQCVSENSTSDYTLREFLVSWRDQPARRIFHYHFQVWPDHGVPA
DPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMIL
DQIVRNGLDTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQTLI
ARKRAEEQSLQVGREYTNIKYTGEIGNDSQRSPLPPAISSISLVPSKTPL
TPTSADLGTGMGLSMGVGMGVGNKHASKQQPPLPVVNCNNNNNGIGNSGC
SNGGGSSTTSSSNGSSNGNINALLGGIGLGLGGNMRKSNFYSDSLKQQQQ
REEQAPAGAGKMQQPAPPLRPRPGILKLLTSPVIFQQNSKTFPKT*

RE32343.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:40:38
Subject Length Description Subject Range Query Range Score Percent Strand
csw-PB 945 CG3954-PB 1..945 1..945 4968 100 Plus
csw-PD 894 CG3954-PD 164..892 211..922 3687 96.7 Plus
csw-PA 841 CG3954-PA 111..839 211..922 3687 96.7 Plus
csw-PC 682 CG3954-PC 1..680 260..922 3432 96.5 Plus
l(1)G0232-PH 498 CG32697-PH 273..475 545..745 381 41 Plus
csw-PD 894 CG3954-PD 59..153 211..304 222 48.4 Plus
csw-PA 841 CG3954-PA 6..100 211..304 222 48.4 Plus