BDGP Sequence Production Resources |
Search the DGRC for RE32514
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 325 |
Well: | 14 |
Vector: | pFlc-1 |
Associated Gene/Transcript | galectin-RA |
Protein status: | RE32514.pep: gold |
Preliminary Size: | 1517 |
Sequenced Size: | 1851 |
Gene | Date | Evidence |
---|---|---|
CG11372 | 2001-12-16 | Blastp of sequenced clone |
CG11372 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11372 | 2003-01-01 | Sim4 clustering to Release 3 |
galectin | 2008-04-29 | Release 5.5 accounting |
galectin | 2008-08-15 | Release 5.9 accounting |
galectin | 2008-12-18 | 5.12 accounting |
1851 bp (1851 high quality bases) assembled on 2001-12-16
GenBank Submission: AY071294
> RE32514.complete AGTCCGCTCACAAACCGCTGCTAAAGGCACACGTATTTTGGCTTTCAGAT GCATACATACATACATGTGTATGTATATATGTATTCAGCCAAAAAAAATC TCGTACATTAAAGCGCGCTGAATTGCACCAAAAGAGCGAGAGAGCGTATA AGCTCCGTGCTCAAAACCGCATTTGCATCGGGTAAAATCGGTAACCCCAT CTTTGCATAGTCAGTATGACGGCAATAATACTCCTGGCTTGCCACTCGGT TCGCGAACTCGTCGATCTGTCAGATGCTCTGTGGCAGAACACTTTTAATA TCGAACGAAGTTTAAACTATTATCGCATCAAGCGCCGTTTGGAACTGTTT CGATTTCATTGCCGCGAGCTTTGGTTGCGTCAGGTGTCAAAAACATCCGA TCCAATGCATCGGAAGGCAGGCATAGATTTTGCAGCCATTGAGGCGGGTG CAGACTGTGTCCTAAATATGGATGCCTTTGACGATACGACAACGGAACTA CACAAGAGGTTTTTACAGGCGGAGGGCACAAGACCCTTTCCTTCGGATTG CATCAGCGGCATCGAGGTGGTGGATGGAAATGAATTTAAAGCCTCATTTT ACGAATATGCAGATGCTGTGCCAAAATATTTTAACGACCAAATAGGGAAA TTGAGCGAAGGGATAAGTTTCACGGTGACTGGGAATCTCTCTGTAAACTG CGAGAGGTTTTCCATCAATCTGGTTTATAACAATGACTCTCGAGATGTGG CGCTCCACATTAATCCACGGTTGCCACAAAACTATATTGTCCGCAACACC AAAGTACAGGACATTTGGGGAAACGAGGAAGTGTCCTCGGCATTGCCGTT TCTACTAAGTCGAGGCGAGGAGTTTTCCATTCAAGTGCTAGTTACTGAGG CATGCTATATGATATCGGTAAACGGACAACACTTTGCAGCGTACACTCAT CGAATCCCTTATAGGGATGTTCGCATTCTGGAAGTGAAGGGAGATGTAAG TAACGTGGAAATGAAGCGAACTTTGGTCTTAAAATATCCTGAGCGATTAC CCCAGTCAGAGGCTAATAACATTGAGCTTCACATAGATGATGGGATTAAT GAAATTGATGCCAGCGTTGAGGAGACTGTTAAAATACCTCATGAGTGGTG CATTATTAGCGCCCCGAACACACAGTCGGACAGTTCGCCTAAGCGTAACA ATAGTTCGAATGATCTTGGCCTTACTTTGCCTTATTATGGAGCATTGCCA CCAAATTCGTTGGTCGATGGTCGATGCTTGAAGATTGAAGGGAGAGTGCG ATTACTTCCCCACTCGTTTTATATAAACCTGCAACAGGGGCAGGACATAT GGCCACATCCAGTAATTGCATTCCACTTAAACCCACGTTTTTCGAAAGCA AGCAGCGGCGCTATTGGAAAGGCGGTGGTGTGTAGGAATGCCTGGCTTAA TGGAGCTTGGGCACAAGAAGAGCGTTCGGAGTTTGACACAAACTTTCGCC CTGGTCGGTCTTTTTGTTTAGCCATTGTTTGTACCAAAACATCCTTTGAG GTGTATGTCAATCGGCAGTTTATGACTGATTTTAAATATAAGGTTAGCCC TGAGGTGGTGGACACTGTCTACATACAAGGAGATGTTAAACTTTGGAATG TAACGCTGGAAAAAAATCAGATGATTAAAGGCAAAAATATGCGAGTCTAT CAGAATCCGTGGTTCTTTAGTGAGTAGTAGCTGTTCATGTTTTTATTTTT TAGTAGTTTAGCGACAATAAAAAAGTGATACGCTCGTGTTTCATTATACA ATATTTTTGTTAATAAATAAAATTATGGTAACGTCAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
galectin.g | 2651 | galectin.g | 1153..2586 | 403..1836 | 6810 | 98.3 | Plus |
galectin.d | 2693 | galectin.d | 1195..2628 | 403..1836 | 6810 | 98.3 | Plus |
galectin.f | 3672 | galectin.f | 2423..3668 | 591..1836 | 6230 | 100 | Plus |
galectin.f | 3672 | galectin.f | 238..828 | 1..591 | 2955 | 100 | Plus |
galectin.g | 2651 | galectin.g | 36..626 | 1..591 | 2955 | 100 | Plus |
galectin.d | 2693 | galectin.d | 78..668 | 1..591 | 2955 | 100 | Plus |
galectin.f | 3672 | galectin.f | 1355..1543 | 403..591 | 585 | 87.3 | Plus |
galectin.f | 3672 | galectin.f | 1260..1320 | 255..315 | 185 | 86.8 | Plus |
galectin.g | 2651 | galectin.g | 1058..1118 | 255..315 | 185 | 86.8 | Plus |
galectin.d | 2693 | galectin.d | 1100..1160 | 255..315 | 185 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 75090..76220 | 705..1835 | 5655 | 100 | Plus |
chr2L | 23010047 | chr2L | 72402..72992 | 1..591 | 2940 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 74917..75034 | 591..708 | 590 | 100 | Plus |
chr2L | 23010047 | chr2L | 73519..73707 | 403..591 | 585 | 87.3 | Plus |
chr2L | 23010047 | chr2L | 73424..73484 | 255..315 | 185 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 75076..76207 | 705..1836 | 5660 | 100 | Plus |
2L | 23513712 | 2L | 72388..72978 | 1..591 | 2955 | 100 | Plus |
2L | 23513712 | 2L | 74903..75020 | 591..708 | 590 | 100 | Plus |
2L | 23513712 | 2L | 73505..73693 | 403..591 | 585 | 87.3 | Plus |
2L | 23513712 | 2L | 73410..73470 | 255..315 | 185 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 75076..76207 | 705..1836 | 5660 | 100 | Plus |
2L | 23513712 | 2L | 72388..72978 | 1..591 | 2955 | 100 | Plus |
2L | 23513712 | 2L | 74903..75020 | 591..708 | 590 | 100 | Plus |
2L | 23513712 | 2L | 73505..73693 | 403..591 | 585 | 87.3 | Plus |
2L | 23513712 | 2L | 73410..73470 | 255..315 | 185 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
1731 | 4648 | 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). | 66..129 | 94..32 | 155 | 73.4 | Minus |
1731 | 4648 | 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). | 4378..4441 | 94..32 | 146 | 71.9 | Minus |
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 712..765 | 25..78 | 117 | 73.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 72402..72991 | 1..590 | 99 | -> | Plus |
chr2L | 74917..75032 | 591..706 | 100 | -> | Plus |
chr2L | 75092..76220 | 707..1835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
galectin-RA | 1..1512 | 216..1727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
galectin-RA | 1..1512 | 216..1727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
galectin-RA | 1..1512 | 216..1727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
galectin-RA | 1..1512 | 216..1727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
galectin-RA | 1..1512 | 216..1727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
galectin-RA | 1..1832 | 1..1832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
galectin-RA | 1..1835 | 1..1835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
galectin-RA | 2..1836 | 1..1835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
galectin-RA | 1..1832 | 1..1832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
galectin-RA | 2..1836 | 1..1835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 72388..72977 | 1..590 | 100 | -> | Plus |
2L | 74903..75018 | 591..706 | 100 | -> | Plus |
2L | 75078..76206 | 707..1835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 72388..72977 | 1..590 | 100 | -> | Plus |
2L | 74903..75018 | 591..706 | 100 | -> | Plus |
2L | 75078..76206 | 707..1835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 72388..72977 | 1..590 | 100 | -> | Plus |
2L | 74903..75018 | 591..706 | 100 | -> | Plus |
2L | 75078..76206 | 707..1835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 72388..72977 | 1..590 | 100 | -> | Plus |
arm_2L | 74903..75018 | 591..706 | 100 | -> | Plus |
arm_2L | 75078..76206 | 707..1835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 72388..72977 | 1..590 | 100 | -> | Plus |
2L | 74903..75018 | 591..706 | 100 | -> | Plus |
2L | 75078..76206 | 707..1835 | 100 | Plus |
Translation from 215 to 1726
> RE32514.pep MTAIILLACHSVRELVDLSDALWQNTFNIERSLNYYRIKRRLELFRFHCR ELWLRQVSKTSDPMHRKAGIDFAAIEAGADCVLNMDAFDDTTTELHKRFL QAEGTRPFPSDCISGIEVVDGNEFKASFYEYADAVPKYFNDQIGKLSEGI SFTVTGNLSVNCERFSINLVYNNDSRDVALHINPRLPQNYIVRNTKVQDI WGNEEVSSALPFLLSRGEEFSIQVLVTEACYMISVNGQHFAAYTHRIPYR DVRILEVKGDVSNVEMKRTLVLKYPERLPQSEANNIELHIDDGINEIDAS VEETVKIPHEWCIISAPNTQSDSSPKRNNSSNDLGLTLPYYGALPPNSLV DGRCLKIEGRVRLLPHSFYINLQQGQDIWPHPVIAFHLNPRFSKASSGAI GKAVVCRNAWLNGAWAQEERSEFDTNFRPGRSFCLAIVCTKTSFEVYVNR QFMTDFKYKVSPEVVDTVYIQGDVKLWNVTLEKNQMIKGKNMRVYQNPWF FSE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15050-PA | 497 | GF15050-PA | 1..496 | 1..503 | 1930 | 70.2 | Plus |
Dana\GF15051-PA | 389 | GF15051-PA | 33..367 | 149..484 | 657 | 38 | Plus |
Dana\GF11976-PA | 321 | GF11976-PA | 14..159 | 142..285 | 152 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24692-PA | 503 | GG24692-PA | 1..503 | 1..503 | 2463 | 90.5 | Plus |
Dere\GG13329-PA | 1348 | GG13329-PA | 813..950 | 339..479 | 155 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11722-PA | 495 | GH11722-PA | 1..494 | 1..503 | 1677 | 61.9 | Plus |
Dgri\GH11723-PA | 386 | GH11723-PA | 44..374 | 149..486 | 673 | 39.4 | Plus |
Dgri\GH14254-PA | 2613 | GH14254-PA | 215..380 | 113..278 | 457 | 50 | Plus |
Dgri\GH20302-PA | 321 | GH20302-PA | 14..157 | 142..283 | 157 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
galectin-PA | 503 | CG11372-PA | 1..503 | 1..503 | 2664 | 100 | Plus |
galectin-PE | 419 | CG11372-PE | 1..419 | 85..503 | 2150 | 97.1 | Plus |
galectin-PB | 402 | CG11372-PB | 24..402 | 125..503 | 2006 | 99.7 | Plus |
galectin-PD | 401 | CG11372-PD | 24..401 | 126..503 | 2005 | 100 | Plus |
galectin-PF | 272 | CG11372-PF | 1..272 | 232..503 | 1454 | 100 | Plus |
CG11374-PC | 401 | CG11374-PC | 44..381 | 149..493 | 640 | 39.6 | Plus |
Pex23-PA | 1350 | CG32226-PA | 815..952 | 339..479 | 165 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16246-PA | 488 | GI16246-PA | 1..482 | 1..498 | 1635 | 60.2 | Plus |
Dmoj\GI23146-PA | 672 | GI23146-PA | 329..654 | 93..476 | 329 | 28.6 | Plus |
Dmoj\GI23146-PA | 672 | GI23146-PA | 426..664 | 48..276 | 278 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16594-PA | 503 | GL16594-PA | 1..502 | 1..503 | 2091 | 74.8 | Plus |
Dper\GL25042-PA | 1348 | GL25042-PA | 814..951 | 339..479 | 159 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10954-PB | 503 | GA10954-PB | 1..502 | 1..503 | 2091 | 74.8 | Plus |
Dpse\GA10955-PB | 392 | GA10955-PB | 44..380 | 149..486 | 695 | 39.5 | Plus |
Dpse\GA16767-PA | 1348 | GA16767-PA | 814..951 | 339..479 | 158 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16712-PA | 503 | GM16712-PA | 1..503 | 1..503 | 2596 | 95.2 | Plus |
Dsec\GM22231-PA | 1348 | GM22231-PA | 813..950 | 339..479 | 164 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22998-PA | 503 | GD22998-PA | 1..503 | 1..503 | 2579 | 94.8 | Plus |
Dsim\GD12202-PA | 1350 | GD12202-PA | 815..952 | 339..479 | 164 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16209-PA | 489 | GJ16209-PA | 1..488 | 1..503 | 1719 | 63.1 | Plus |
Dvir\GJ16210-PA | 390 | GJ16210-PA | 22..379 | 128..486 | 687 | 40.1 | Plus |
Dvir\GJ10448-PA | 665 | GJ10448-PA | 355..652 | 134..486 | 400 | 30.3 | Plus |
Dvir\GJ10448-PA | 665 | GJ10448-PA | 518..663 | 138..282 | 347 | 42.6 | Plus |
Dvir\GJ13532-PA | 1349 | GJ13532-PA | 815..960 | 339..487 | 167 | 31.4 | Plus |
Dvir\GJ21223-PA | 321 | GJ21223-PA | 14..140 | 142..265 | 152 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21075-PA | 513 | GK21075-PA | 1..512 | 1..503 | 1769 | 64.1 | Plus |
Dwil\GK18874-PA | 427 | GK18874-PA | 44..392 | 149..491 | 657 | 38.2 | Plus |
Dwil\GK17237-PA | 1357 | GK17237-PA | 855..960 | 355..479 | 156 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16549-PA | 502 | GE16549-PA | 1..502 | 1..503 | 2437 | 90.1 | Plus |
Dyak\GE22947-PA | 1286 | GE22947-PA | 425..562 | 339..479 | 162 | 32.4 | Plus |
Dyak\GE22418-PA | 1348 | GE22418-PA | 813..950 | 339..479 | 160 | 32.4 | Plus |
Translation from 215 to 1726
> RE32514.hyp MTAIILLACHSVRELVDLSDALWQNTFNIERSLNYYRIKRRLELFRFHCR ELWLRQVSKTSDPMHRKAGIDFAAIEAGADCVLNMDAFDDTTTELHKRFL QAEGTRPFPSDCISGIEVVDGNEFKASFYEYADAVPKYFNDQIGKLSEGI SFTVTGNLSVNCERFSINLVYNNDSRDVALHINPRLPQNYIVRNTKVQDI WGNEEVSSALPFLLSRGEEFSIQVLVTEACYMISVNGQHFAAYTHRIPYR DVRILEVKGDVSNVEMKRTLVLKYPERLPQSEANNIELHIDDGINEIDAS VEETVKIPHEWCIISAPNTQSDSSPKRNNSSNDLGLTLPYYGALPPNSLV DGRCLKIEGRVRLLPHSFYINLQQGQDIWPHPVIAFHLNPRFSKASSGAI GKAVVCRNAWLNGAWAQEERSEFDTNFRPGRSFCLAIVCTKTSFEVYVNR QFMTDFKYKVSPEVVDTVYIQGDVKLWNVTLEKNQMIKGKNMRVYQNPWF FSE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
galectin-PA | 503 | CG11372-PA | 1..503 | 1..503 | 2664 | 100 | Plus |
galectin-PE | 419 | CG11372-PE | 1..419 | 85..503 | 2150 | 97.1 | Plus |
galectin-PB | 402 | CG11372-PB | 24..402 | 125..503 | 2006 | 99.7 | Plus |
galectin-PD | 401 | CG11372-PD | 24..401 | 126..503 | 2005 | 100 | Plus |
galectin-PF | 272 | CG11372-PF | 1..272 | 232..503 | 1454 | 100 | Plus |