BDGP Sequence Production Resources |
Search the DGRC for RE32624
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 326 |
Well: | 24 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG5861-RA |
Protein status: | RE32624.pep: gold |
Preliminary Size: | 765 |
Sequenced Size: | 1118 |
Gene | Date | Evidence |
---|---|---|
CG5861 | 2001-12-14 | Blastp of sequenced clone |
CG5861 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5861 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5861 | 2008-04-29 | Release 5.5 accounting |
CG5861 | 2008-08-15 | Release 5.9 accounting |
CG5861 | 2008-12-18 | 5.12 accounting |
1118 bp (1118 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071295
> RE32624.complete AGTGGCTACTTCTTTTCGTTCGGAAAGACACACGTTTTCCAATATTTCAA AATATTTATTTATAATAGTTATTATTAAAATATTTATTGTAAAATATTGT CTGCAAAACTAGCTTGTTTTTTATAGTCTGCCTGACATGCCGTCAGCCCT GTTAAGCACATATCGATAACCCACGGCAAGCAACGCTAGTTTTTTTCTTT TCAACTTTTAATTCTTCTCTTAATTAAGCCAAAATAAAATAGCCATAATT TATCAAAGAAAATGACACTGTATCACTTTGGAAATTGTGTGGCCCTGCTG ACGCCGTACTACTTCACCTATAAATACTCCGGCCTATCAGAATATGGAGC CTTCTGGAAGTGCGTGCAGGCGGGAGGCATTTATATATTCACACAGCTCG TCAAGATGCTGGTGCTGGCCACATTCTTCTACTCGGACGCTCCATCCTCC AGCGGCGAGTTCAACTTCTTTGCGGAGATTCTTCGCTGCAGCATGGACAT CGCCGATCTGCTTGGATTCGCCCTAATCTTGAGTCGCATACCCGGCAAGG GCCACTCAAAGCTCATAACGGCTGGACTTGGATGGGCCACCGCCGAAGTG ATTCTTTCCCGAGGTATCATGCTGTGGGTGGGTGCCCGAGGCACCGAGTT CAGTTGGATCTACATCCTCAAGTGTCTGGAATCGAACGTGCTTCTGGTGC AGCACATCACTACGGCCACCCTGATCTGGCTCTTCACCCGTCACGATTTG AACAAGGCATTAAAGCCGCTGGTTAGTCTACTTCTGGCGGTGACTGTCTT CAAAGGCGTCTGGCTGGAGGGCATGCTCCACATTCTGACCATTGGACCTT GGCTAACGGTGGCTGTTAAAGCGCTGGTGGCGGCCGTCATTGGATTCTGC ACGCTGCACATCTATTCGGGTCTGGCCCAGCAGATCGGAATTTAAGCAAT TGTGCCAAACACTCTGTATTCCTTTGTTTTTGTAACTTGTTTATTTTTTG GTGTTGTCAGAGAAATTGAGATTTTGTAACAAAGACAACAATTACGGTTT AGAGAATTACTCCAAATGTTAATGAATTATAGCTACGATAACGTAATAGT AACAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 16304663..16305182 | 1103..584 | 2600 | 100 | Minus |
chr2L | 23010047 | chr2L | 16305803..16306137 | 335..1 | 1645 | 99.4 | Minus |
chr2L | 23010047 | chr2L | 16305555..16305694 | 475..336 | 700 | 100 | Minus |
chr2L | 23010047 | chr2L | 16305376..16305486 | 584..474 | 555 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16305798..16306320 | 1106..584 | 2615 | 100 | Minus |
2L | 23513712 | 2L | 16306941..16307275 | 335..1 | 1660 | 99.7 | Minus |
2L | 23513712 | 2L | 16306693..16306832 | 475..336 | 700 | 100 | Minus |
2L | 23513712 | 2L | 16306514..16306624 | 584..474 | 555 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16305798..16306320 | 1106..584 | 2615 | 100 | Minus |
2L | 23513712 | 2L | 16306941..16307275 | 335..1 | 1660 | 99.7 | Minus |
2L | 23513712 | 2L | 16306693..16306832 | 475..336 | 700 | 100 | Minus |
2L | 23513712 | 2L | 16306514..16306624 | 584..474 | 555 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 16304663..16305182 | 584..1103 | 100 | <- | Minus |
chr2L | 16305377..16305485 | 475..583 | 100 | <- | Minus |
chr2L | 16305556..16305694 | 336..474 | 100 | <- | Minus |
chr2L | 16305803..16306039 | 99..335 | 100 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5861-RA | 1..684 | 262..945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5861-RA | 1..684 | 262..945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5861-RA | 1..684 | 262..945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5861-RA | 1..684 | 262..945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5861-RA | 1..684 | 262..945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5861-RA | 1..1103 | 1..1103 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5861-RA | 1..1103 | 1..1103 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5861-RA | 24..1126 | 1..1103 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5861-RA | 1..1103 | 1..1103 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5861-RA | 24..1126 | 1..1103 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16305801..16306320 | 584..1103 | 100 | <- | Minus |
2L | 16306515..16306623 | 475..583 | 100 | <- | Minus |
2L | 16306694..16306832 | 336..474 | 100 | <- | Minus |
2L | 16306941..16307275 | 1..335 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16305801..16306320 | 584..1103 | 100 | <- | Minus |
2L | 16306515..16306623 | 475..583 | 100 | <- | Minus |
2L | 16306694..16306832 | 336..474 | 100 | <- | Minus |
2L | 16306941..16307275 | 1..335 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16305801..16306320 | 584..1103 | 100 | <- | Minus |
2L | 16306515..16306623 | 475..583 | 100 | <- | Minus |
2L | 16306694..16306832 | 336..474 | 100 | <- | Minus |
2L | 16306941..16307275 | 1..335 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 16305801..16306320 | 584..1103 | 100 | <- | Minus |
arm_2L | 16306515..16306623 | 475..583 | 100 | <- | Minus |
arm_2L | 16306694..16306832 | 336..474 | 100 | <- | Minus |
arm_2L | 16306941..16307275 | 1..335 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16305801..16306320 | 584..1103 | 100 | <- | Minus |
2L | 16306515..16306623 | 475..583 | 100 | <- | Minus |
2L | 16306694..16306832 | 336..474 | 100 | <- | Minus |
2L | 16306941..16307275 | 1..335 | 99 | Minus |
Translation from 261 to 944
> RE32624.pep MTLYHFGNCVALLTPYYFTYKYSGLSEYGAFWKCVQAGGIYIFTQLVKML VLATFFYSDAPSSSGEFNFFAEILRCSMDIADLLGFALILSRIPGKGHSK LITAGLGWATAEVILSRGIMLWVGARGTEFSWIYILKCLESNVLLVQHIT TATLIWLFTRHDLNKALKPLVSLLLAVTVFKGVWLEGMLHILTIGPWLTV AVKALVAAVIGFCTLHIYSGLAQQIGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15326-PA | 228 | GF15326-PA | 1..228 | 1..227 | 1132 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24174-PA | 227 | GG24174-PA | 1..227 | 1..227 | 1170 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11431-PA | 227 | GH11431-PA | 1..227 | 1..227 | 1092 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5861-PA | 227 | CG5861-PA | 1..227 | 1..227 | 1183 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14704-PA | 227 | GI14704-PA | 1..227 | 1..227 | 1081 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14091-PA | 228 | GL14091-PA | 1..228 | 1..227 | 1112 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19185-PA | 228 | GA19185-PA | 1..228 | 1..227 | 1112 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17912-PA | 227 | GM17912-PA | 1..227 | 1..227 | 1177 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21922-PA | 202 | GD21922-PA | 1..202 | 1..227 | 1015 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17164-PA | 227 | GJ17164-PA | 1..227 | 1..227 | 1093 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23717-PA | 228 | GK23717-PA | 1..228 | 1..227 | 1085 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19368-PA | 227 | GE19368-PA | 1..227 | 1..227 | 1168 | 99.1 | Plus |
Translation from 261 to 944
> RE32624.hyp MTLYHFGNCVALLTPYYFTYKYSGLSEYGAFWKCVQAGGIYIFTQLVKML VLATFFYSDAPSSSGEFNFFAEILRCSMDIADLLGFALILSRIPGKGHSK LITAGLGWATAEVILSRGIMLWVGARGTEFSWIYILKCLESNVLLVQHIT TATLIWLFTRHDLNKALKPLVSLLLAVTVFKGVWLEGMLHILTIGPWLTV AVKALVAAVIGFCTLHIYSGLAQQIGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5861-PA | 227 | CG5861-PA | 1..227 | 1..227 | 1183 | 100 | Plus |