BDGP Sequence Production Resources |
Search the DGRC for RE32990
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 329 |
Well: | 90 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Rbf2-RA |
Protein status: | RE32990.pep: gold |
Preliminary Size: | 2448 |
Sequenced Size: | 2713 |
Gene | Date | Evidence |
---|---|---|
CG5083 | 2001-12-14 | Blastp of sequenced clone |
CG5083 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5083 | 2003-01-01 | Sim4 clustering to Release 3 |
Rbf2 | 2008-04-29 | Release 5.5 accounting |
Rbf2 | 2008-08-15 | Release 5.9 accounting |
Rbf2 | 2008-12-18 | 5.12 accounting |
2713 bp (2713 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071301
> RE32990.complete GATAACAATGGCGGTGAGGCAGGCAGCAATCGAAATCATTCGCGCCTTTC TGAAATTTGCATTTTGTACAGTCTAAACGGGGATTCGCGTAAACTACGCA GAAATATAAACAAACAAAAACTAGTAGACTATAGAATATAAACAGTTTCC TACCAATGGAGACTTGTGAAGTGGAGGGAGAGGCGGAGACGCTGGTGAGA CGCTTCTCCGTCAGCTGCGAGCAATTGGAGCTGGAAGCGAGAATTCAGCA AAGCGCTCTGTCCACCTACCATCGCTTGGATGCGGTCAACGGGCTGTCCA CCAGCGAGGCAGATGCCCAGGAGTGGCTGTGTTGCGCCGTCTACAGCGAA CTGCAGCGCTCGAAGATGCGCGATATTAGGGAGTCCATCAACGAGGCAAA CGATTCGGTGGCCAAGAACTGCTGCTGGAACGTGTCACTAACCCGTCTGC TGCGCAGCTTTAAGATGAACGTGTCCCAGTTTCTACGCCGCATGGAGCAC TGGAATTGGCTGACCCAAAACGAGAACACTTTCCAGCTGGAGGTTGAGGA ACTGCGTTGTCGACTTGGTATTACTTCGACGCTGCTGCGGCATTATAAGC ACATCTTTCGGAGCCTGTTCGTTCACCCCGGCAAGGGTGCGGACCCGGGT GCCGCGAATCACTACCAAGCGCTGTATGAGTTCGGTTGGTTGCTCTTCCT GGTCATTCGCAACGAGTTACCCGGTTTTGCGATTACAAACCTGATCAACG GCTGTCAGGTGCTCGTTTGCACAATGGATCTCCTTTTCGTGAACGCCTTA GAGGTGCCCCGATCCGTAGTTATCCGCCGGGAGTTCTCTGGAGTGCCCAA GAATTGGGACACCGAAGACTTCAATCCTATTTTGCTAAATAAATATAGCG TGCTAGAAGCACTGGGAGAACTGATTCCCGAGCTACCAGCGAAGGGAGTG GTGCAAATGAAGAACGCCTTTTTCCACAAAGCCTTAATAATGCTCTATAT GGACCATAGTCTAGTTGGAGACGACACCCATATGCGGGAGATCATTAAGG AGGGTATGCTAGATATCAATCTGGAAAACTTAAATCGCAAATACACCAAT CAAGTAGCCGACATTAGTGAGATGGACGAGCGTGTGCTGCTCAGCGTCCA GGGGGCGATAGAGACCAAAGGGGACTCTCCTAAAAGCCCACAGCTCGCCT TCCAAACAAGCTCGTCACCTTCGCATAGGAAGCTGTCCACCCATGATCTA CCAGCAAGTCTTCCCCTAAGCATTATAAAAGCATTCCCCAAGAAGGAAGA CGCAGATAAAATTGTAAATTATTTAGATCAAACTCTGGAAGAAATGAATC GGACCTTTACCATGGCCGTGAAAGATTTTTTGGATGCTGAGTTGTCTGGA AAACGATTCCGCCAGGCCAGAGGCCTTTACTACAAATATTTGCAGAAAAT TTTGGGACCGGAGCTGGTTCAAAAACCACAGCTGAAGATTGGTCAGTTAA TGAAGCAGCGCAAGCTTACCGCCGCCCTGTTAGCTTGCTGCCTGGAACTG GCACTTCACGTCCACCACAAACTAGTGGAAGGCCTAAGGTTTCCCTTTGT CCTGCACTGCTTTTCACTGGACGCCTACGACTTTCAAAAGATTCTAGAGT TGGTGGTGCGCTACGATCATGGTTTTCTGGGCAGAGAGCTGATCAAGCAC CTGGATGTGGTGGAGGAAATGTGCCTGGACTCGTTGATTTTCCGCAAGAG CTCACAGCTGTGGTGGGAGCTAAATCAAAGACTTCCCCGCTACAAGGAAG TCGATGCAGAAACAGAAGACAAGGAGAACTTTTCAACAGGCTCAAGCATC TGCCTTCGAAAGTTCTACGGACTGGCCAACCGGCGGCTGCTCCTTCTGTG TAAGAGTCTTTGCCTCGTGGATTCCTTTCCCCAAATATGGCACCTGGCCG AGCACTCTTTCACCTTAGAGAGTAGCCGTCTGCTCCGCAATCGACACCTG GACCAACTGCTGTTGTGCGCCATACATCTTCATGTTCGGCTCGAGAAGCT TCACCTCACTTTCAGCATGATTATCCAGCACTATCGCCGACAGCCGCACT TTCGGAGAAGCGCTTACCGAGAGGTTAGCTTGGGCAATGGTCAGACCGCT GATATTATCACTTTCTACAACAGTGTGTATGTCCAAAGTATGGGCAACTA TGGCCGCCACCTGGAGTGTGCGCAAACACGCAAGTCACTGGAAGAATCAC AGAGTAACGTTGGTATTCTGACGGAAACAACTTCCAACGAATTGAGCATG AGAGCCAACATCAGCATATCTTCACCGCCCCCTCCCAGGGTATGCCAAAG TGGCTCCTGCTCCAGTCATCCACCTTCATCTCCCGCCGCATCACCACTTT CCTTGCAAAGCTCGCCCAACGTAAAGCGTGCTGCTTCGAGTAACGACTTG ATGAGAGAGATCAAGCGACCAAACATCCTGCGGCGTCGCCAGCTTTCAGT GATCTAATAACCAATCAAAAAAGGCTTAAATACTTGGCTGCATTTTACGC AGCTAGCTTAGTATATTTCTTAAACTAAAAAATGGTAATTAAATAATGTT TAAATTATAGATATTTTATTAACTTGTTCAAGTAAGTTAAAAGCTTTTGC TTTTGTAAAAATAAAGGAATAACTGCCACTCGTAGTTTAAAAAAAATAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11790049..11792755 | 1..2695 | 13140 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15965451..15968145 | 1..2695 | 13445 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 15706282..15708976 | 1..2695 | 13445 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11790049..11792756 | 1..2697 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbf2-RA | 1..2352 | 156..2507 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbf2-RA | 1..2352 | 156..2507 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbf2-RA | 1..2352 | 156..2507 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbf2-RA | 1..2352 | 156..2507 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbf2-RA | 1..2352 | 156..2507 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbf2-RA | 1..2690 | 1..2690 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbf2-RA | 1..2688 | 1..2688 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbf2-RA | 1..2688 | 1..2688 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbf2-RA | 1..2690 | 1..2690 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rbf2-RA | 6..2693 | 1..2688 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15965451..15968146 | 1..2697 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15965451..15968146 | 1..2697 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15965451..15968146 | 1..2697 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11791173..11793868 | 1..2697 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15706282..15708977 | 1..2697 | 99 | Plus |
Translation from 155 to 2506
> RE32990.pep METCEVEGEAETLVRRFSVSCEQLELEARIQQSALSTYHRLDAVNGLSTS EADAQEWLCCAVYSELQRSKMRDIRESINEANDSVAKNCCWNVSLTRLLR SFKMNVSQFLRRMEHWNWLTQNENTFQLEVEELRCRLGITSTLLRHYKHI FRSLFVHPGKGADPGAANHYQALYEFGWLLFLVIRNELPGFAITNLINGC QVLVCTMDLLFVNALEVPRSVVIRREFSGVPKNWDTEDFNPILLNKYSVL EALGELIPELPAKGVVQMKNAFFHKALIMLYMDHSLVGDDTHMREIIKEG MLDINLENLNRKYTNQVADISEMDERVLLSVQGAIETKGDSPKSPQLAFQ TSSSPSHRKLSTHDLPASLPLSIIKAFPKKEDADKIVNYLDQTLEEMNRT FTMAVKDFLDAELSGKRFRQARGLYYKYLQKILGPELVQKPQLKIGQLMK QRKLTAALLACCLELALHVHHKLVEGLRFPFVLHCFSLDAYDFQKILELV VRYDHGFLGRELIKHLDVVEEMCLDSLIFRKSSQLWWELNQRLPRYKEVD AETEDKENFSTGSSICLRKFYGLANRRLLLLCKSLCLVDSFPQIWHLAEH SFTLESSRLLRNRHLDQLLLCAIHLHVRLEKLHLTFSMIIQHYRRQPHFR RSAYREVSLGNGQTADIITFYNSVYVQSMGNYGRHLECAQTRKSLEESQS NVGILTETTSNELSMRANISISSPPPPRVCQSGSCSSHPPSSPAASPLSL QSSPNVKRAASSNDLMREIKRPNILRRRQLSVI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18553-PA | 786 | GF18553-PA | 1..782 | 1..778 | 2312 | 57.5 | Plus |
Dana\GF22059-PA | 854 | GF22059-PA | 21..706 | 6..683 | 728 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16967-PA | 780 | GG16967-PA | 1..780 | 1..783 | 3315 | 84.7 | Plus |
Dere\GG12742-PA | 843 | GG12742-PA | 36..699 | 21..676 | 736 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23495-PA | 769 | GH23495-PA | 4..765 | 11..778 | 1467 | 41.7 | Plus |
Dgri\GH12452-PA | 818 | GH12452-PA | 22..699 | 6..682 | 710 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rbf2-PA | 783 | CG5083-PA | 1..783 | 1..783 | 4059 | 100 | Plus |
Rbf-PA | 845 | CG7413-PA | 26..707 | 11..682 | 690 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22956-PA | 792 | GI22956-PA | 10..788 | 13..778 | 1738 | 45.4 | Plus |
Dmoj\GI14825-PA | 802 | GI14825-PA | 6..682 | 11..682 | 739 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22085-PA | 781 | GL22085-PA | 1..778 | 1..778 | 1746 | 46.4 | Plus |
Dper\GL14434-PA | 833 | GL14434-PA | 31..708 | 16..683 | 750 | 30.4 | Plus |
Dper\GL22656-PA | 387 | GL22656-PA | 166..375 | 365..567 | 470 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18648-PA | 781 | GA18648-PA | 1..778 | 1..778 | 1741 | 46.6 | Plus |
Dpse\GA20332-PA | 833 | GA20332-PA | 31..708 | 16..683 | 750 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24273-PA | 782 | GM24273-PA | 1..782 | 1..783 | 3539 | 90 | Plus |
Dsec\GM19021-PA | 799 | GM19021-PA | 26..677 | 11..657 | 660 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19061-PA | 779 | GD19061-PA | 1..779 | 1..783 | 3509 | 89.1 | Plus |
Dsim\GD16459-PA | 845 | GD16459-PA | 26..707 | 11..682 | 706 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23772-PA | 792 | GJ23772-PA | 8..788 | 12..778 | 1741 | 46.7 | Plus |
Dvir\GJ19490-PA | 815 | GJ19490-PA | 22..721 | 6..715 | 778 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14024-PA | 807 | GK14024-PA | 16..802 | 14..777 | 1691 | 44.7 | Plus |
Dwil\GK19998-PA | 833 | GK19998-PA | 59..731 | 21..683 | 678 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24354-PA | 783 | GE24354-PA | 1..783 | 1..783 | 3370 | 85.7 | Plus |
Dyak\GE16567-PA | 635 | GE16567-PA | 1..491 | 203..683 | 554 | 30.3 | Plus |
Dyak\GE16566-PA | 216 | GE16566-PA | 31..209 | 16..193 | 158 | 24.3 | Plus |
Translation from 155 to 2506
> RE32990.hyp METCEVEGEAETLVRRFSVSCEQLELEARIQQSALSTYHRLDAVNGLSTS EADAQEWLCCAVYSELQRSKMRDIRESINEANDSVAKNCCWNVSLTRLLR SFKMNVSQFLRRMEHWNWLTQNENTFQLEVEELRCRLGITSTLLRHYKHI FRSLFVHPGKGADPGAANHYQALYEFGWLLFLVIRNELPGFAITNLINGC QVLVCTMDLLFVNALEVPRSVVIRREFSGVPKNWDTEDFNPILLNKYSVL EALGELIPELPAKGVVQMKNAFFHKALIMLYMDHSLVGDDTHMREIIKEG MLDINLENLNRKYTNQVADISEMDERVLLSVQGAIETKGDSPKSPQLAFQ TSSSPSHRKLSTHDLPASLPLSIIKAFPKKEDADKIVNYLDQTLEEMNRT FTMAVKDFLDAELSGKRFRQARGLYYKYLQKILGPELVQKPQLKIGQLMK QRKLTAALLACCLELALHVHHKLVEGLRFPFVLHCFSLDAYDFQKILELV VRYDHGFLGRELIKHLDVVEEMCLDSLIFRKSSQLWWELNQRLPRYKEVD AETEDKENFSTGSSICLRKFYGLANRRLLLLCKSLCLVDSFPQIWHLAEH SFTLESSRLLRNRHLDQLLLCAIHLHVRLEKLHLTFSMIIQHYRRQPHFR RSAYREVSLGNGQTADIITFYNSVYVQSMGNYGRHLECAQTRKSLEESQS NVGILTETTSNELSMRANISISSPPPPRVCQSGSCSSHPPSSPAASPLSL QSSPNVKRAASSNDLMREIKRPNILRRRQLSVI*