BDGP Sequence Production Resources |
Search the DGRC for RE33114
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 331 |
Well: | 14 |
Vector: | pFlc-1 |
Associated Gene/Transcript | RpL5-RA |
Protein status: | RE33114.pep: gold |
Sequenced Size: | 1077 |
Gene | Date | Evidence |
---|---|---|
CG17489 | 2001-12-14 | Blastp of sequenced clone |
CG17489 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17489 | 2003-01-01 | Sim4 clustering to Release 3 |
RpL5 | 2008-04-29 | Release 5.5 accounting |
RpL5 | 2008-08-15 | Release 5.9 accounting |
RpL5 | 2008-12-18 | 5.12 accounting |
1077 bp (1077 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071305
> RE33114.complete ACGTTTGTTTCTTGGATCCAATAAGGCCGCACTATTTTCCTTCTTTTTGC TAGCAATTTCCGGCGAGCGGTTATATTGTTATCAAATTTTAAAATGGGTT TCGTTAAGGTAGTCAAGAACAAGCAGTACTTTAAGAGGTACCAAGTCAAG TTCCGAAGGCGTCGCGAAGGAAAGACCGATTACTATGCCAGGAAACGCCT AACATTTCAGGACAAGAACAAGTACAACACTCCCAAGTACCGTTTGATCG TACGTTTGTCCAACAAGGACATCACAGTACAGATCGCCTATGCTCGCATC GAGGGTGATCGCGTGGTGTGCGCTGCTTATTCCCATGAGCTTCCCAAATA CGGGATCCAGGTTGGATTGACCAACTACGCTGCTGCTTACTGCACAGGCC TGCTGGTCGCCCGTCGTGTCCTTAACAAGTTGGGACTGGACTCCCTATAT GCAGGATGCACTGAAGTGACTGGTGAGGAGTTCAACGTCGAGCCTGTTGA TGACGGCCCAGGGGCATTCCGTTGCTTCTTGGATGTTGGACTCGCTCGTA CTACAACTGGTGCCCGTGTGTTTGGCGCTATGAAGGGAGCAGTTGATGGT GGTCTAAACATACCTCACTCTGTGAAACGCTTTCCTGGATACTCTGCTGA AACCAAGAGCTTTAATGCCGATGTGCATCGCGCTCATATATTTGGCCAGC ACGTTGCAGACTATATGCGTTCTTTGGAGGAGGAGGATGAGGAGAGCTTC AAAAGGCAGTTTAGCCGATACATCAAGTTGGGCATTCGTGCTGATGATCT TGAGGATATCTATAAAAAAGCCCACCAGGCAATTCGTAACGACCCTACAC ACAAGGTCACCGCTAAGAAGTCTTCTGCCGTTACGAAGAAAAGGTGGAAT GCTAAGAAACTCACAAACGAGCAACGGAAGACTAAGATTGCAGCTCATAA GGCAGCATATGTTGCCAAGCTGCAGTCTGAAACTGAGGCTTAAAAGTGTT CGTCACCAGCTTCAGTTTATATTGGTGTAAAAATAAATAAACAGTTCTAA TGACACCAAAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL5-RB | 1411 | RpL5-RB | 4..1058 | 4..1058 | 5275 | 100 | Plus |
RpL5-RA | 1479 | RpL5-RA | 134..1126 | 66..1058 | 4965 | 100 | Plus |
RpL5.b | 1757 | RpL5.b | 98..1090 | 66..1058 | 4965 | 100 | Plus |
RpL5-RA | 1479 | RpL5-RA | 17..80 | 4..67 | 320 | 100 | Plus |
RpL5.b | 1757 | RpL5.b | 1..44 | 24..67 | 220 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 22426858..22427297 | 798..359 | 2200 | 100 | Minus |
chr2L | 23010047 | chr2L | 22427354..22427620 | 362..96 | 1335 | 100 | Minus |
chr2L | 23010047 | chr2L | 22426045..22426304 | 1058..799 | 1300 | 100 | Minus |
chr2L | 23010047 | chr2L | 22427862..22427925 | 67..4 | 320 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 22535617..22536056 | 798..359 | 2200 | 100 | Minus |
2L | 23513712 | 2L | 22536113..22536379 | 362..96 | 1335 | 100 | Minus |
2L | 23513712 | 2L | 22534804..22535063 | 1058..799 | 1300 | 100 | Minus |
2L | 23513712 | 2L | 22536621..22536684 | 67..4 | 320 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 22535617..22536056 | 798..359 | 2200 | 100 | Minus |
2L | 23513712 | 2L | 22536113..22536379 | 362..96 | 1335 | 100 | Minus |
2L | 23513712 | 2L | 22534804..22535063 | 1058..799 | 1300 | 100 | Minus |
2L | 23513712 | 2L | 22536621..22536684 | 67..4 | 320 | 100 | Minus |
2L | 23513712 | 2L | 22536536..22536567 | 97..66 | 160 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
G3 | 4605 | G3 G3 4605bp | 2982..3090 | 1018..908 | 117 | 63.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 22426042..22426304 | 799..1061 | 99 | <- | Minus |
chr2L | 22426858..22427295 | 361..798 | 100 | <- | Minus |
chr2L | 22427356..22427619 | 97..360 | 100 | <- | Minus |
chr2L | 22427778..22427806 | 68..96 | 100 | <- | Minus |
chr2L | 22427862..22427928 | 1..67 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL5-RB | 1..900 | 94..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL5-RB | 1..900 | 94..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL5-RA | 1..900 | 94..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL5-RB | 1..900 | 94..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL5-RB | 1..900 | 94..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL5-RB | 1..1059 | 1..1061 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL5-RB | 1..1059 | 1..1061 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL5-RG | 1..1059 | 1..1061 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL5-RB | 1..1059 | 1..1061 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL5-RG | 1..1059 | 1..1061 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22534801..22535063 | 799..1061 | 99 | <- | Minus |
2L | 22535617..22536054 | 361..798 | 100 | <- | Minus |
2L | 22536115..22536378 | 97..360 | 100 | <- | Minus |
2L | 22536537..22536565 | 68..96 | 100 | <- | Minus |
2L | 22536621..22536687 | 1..67 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22534801..22535063 | 799..1061 | 99 | <- | Minus |
2L | 22535617..22536054 | 361..798 | 100 | <- | Minus |
2L | 22536115..22536378 | 97..360 | 100 | <- | Minus |
2L | 22536537..22536565 | 68..96 | 100 | <- | Minus |
2L | 22536621..22536687 | 1..67 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22534801..22535063 | 799..1061 | 99 | <- | Minus |
2L | 22535617..22536054 | 361..798 | 100 | <- | Minus |
2L | 22536115..22536378 | 97..360 | 100 | <- | Minus |
2L | 22536537..22536565 | 68..96 | 100 | <- | Minus |
2L | 22536621..22536687 | 1..67 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 22427533..22427795 | 799..1061 | 99 | <- | Minus |
arm_2L | 22428349..22428786 | 361..798 | 100 | <- | Minus |
arm_2L | 22428847..22429110 | 97..360 | 100 | <- | Minus |
arm_2L | 22429269..22429297 | 68..96 | 100 | <- | Minus |
arm_2L | 22429353..22429419 | 1..67 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22534801..22535063 | 799..1061 | 99 | <- | Minus |
2L | 22535617..22536054 | 361..798 | 100 | <- | Minus |
2L | 22536115..22536378 | 97..360 | 100 | <- | Minus |
2L | 22536537..22536565 | 68..96 | 100 | <- | Minus |
2L | 22536621..22536687 | 1..67 | 98 | Minus |
Translation from 93 to 992
> RE33114.pep MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYR LIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYC TGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGL ARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIF GQHVADYMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRND PTHKVTAKKSSAVTKKRWNAKKLTNEQRKTKIAAHKAAYVAKLQSETEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22760-PA | 308 | GF22760-PA | 11..308 | 2..299 | 1574 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21448-PA | 299 | GG21448-PA | 2..299 | 2..299 | 1590 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13292-PA | 858 | GH13292-PA | 560..858 | 1..299 | 1467 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL5-PG | 299 | CG17489-PG | 1..299 | 1..299 | 1553 | 100 | Plus |
RpL5-PH | 299 | CG17489-PH | 1..299 | 1..299 | 1553 | 100 | Plus |
RpL5-PB | 299 | CG17489-PB | 1..299 | 1..299 | 1553 | 100 | Plus |
RpL5-PA | 299 | CG17489-PA | 1..299 | 1..299 | 1553 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17484-PA | 756 | GI17484-PA | 460..756 | 2..299 | 1448 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21177-PA | 299 | GL21177-PA | 1..299 | 1..299 | 1575 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28757-PA | 299 | GA28757-PA | 1..299 | 1..299 | 1575 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26730-PA | 318 | GM26730-PA | 21..318 | 2..299 | 1593 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15046-PA | 992 | GJ15046-PA | 694..992 | 1..299 | 1494 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24660-PA | 299 | GK24660-PA | 1..299 | 1..299 | 1565 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\yip6-PA | 299 | GE15279-PA | 1..299 | 1..299 | 1598 | 100 | Plus |
Translation from 93 to 992
> RE33114.hyp MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYR LIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYC TGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGL ARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIF GQHVADYMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRND PTHKVTAKKSSAVTKKRWNAKKLTNEQRKTKIAAHKAAYVAKLQSETEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL5-PG | 299 | CG17489-PG | 1..299 | 1..299 | 1553 | 100 | Plus |
RpL5-PH | 299 | CG17489-PH | 1..299 | 1..299 | 1553 | 100 | Plus |
RpL5-PB | 299 | CG17489-PB | 1..299 | 1..299 | 1553 | 100 | Plus |
RpL5-PA | 299 | CG17489-PA | 1..299 | 1..299 | 1553 | 100 | Plus |