Clone RE33604 Report

Search the DGRC for RE33604

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:336
Well:4
Vector:pFlc-1
Associated Gene/Transcriptcomt-RA
Protein status:RE33604.pep: gold
Preliminary Size:3047
Sequenced Size:3128

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1618 2002-01-01 Sim4 clustering to Release 2
CG1618 2003-01-01 Sim4 clustering to Release 3
CG1618 2003-08-11 Blastp of sequenced clone
comt 2008-04-29 Release 5.5 accounting
comt 2008-08-15 Release 5.9 accounting
comt 2008-12-18 5.12 accounting

Clone Sequence Records

RE33604.complete Sequence

3128 bp (3128 high quality bases) assembled on 2003-08-11

GenBank Submission: BT010259

> RE33604.complete
GATGTGCTGAATAAAATTTTAGATCACATCTTCCTTGAAAGTTCAGAAAG
GATATAGTTCACAATTCGTTCAAAAATTAATATATATATATATAGTTATG
CTGTTTCAGTGATACTGTAAACAAATATCAAACGTTAATTCGCACACAAA
GCTGCGTTTTCTGACCATTAAAGTACTTCCATTGGATTATAATTATTGAT
TTTTGTCAAATTCTAAACAACCCCGTGAAAATCAGCAAGAATCTAAAGAA
ATGGCTTATATTTTGAAGGCCACCAAATGTCCCACGGACGAGCTTTCGCT
GACCAATCGGGCTATAGTGAATGTTGGTGATTTTCCGGAGGAAATCAAAT
ATGCGGACATATCGCCGGCTCCGGGTCAGCACTTCATCTTTGCGCTGGAG
AAAACGGTGGAGGTGCCCAGCGGCTATGTTGGCTTCTCCCTGGTCCAACG
AAAGTGGGCCATGGTGTCCATTAATCAGGAACTGGAGGTTCGTCCCTATC
GCTTTGATGCCAGCTCGGATGTCATCACTTGTGTGTCCTTTGAGACGGAC
TTTCTGCAGAAGAAGACTGTCTCCCAGGAACCCTATGACTCCGATCAAAT
GGCCAAGGAGTTCATCATGCAATTCGCCGGAATGGCACTCACCGTTGGCC
AATCACTGGTCTTCAATTTCAAGGACAAGAAACTTCTCGGCCTGGCCGTC
AAATCCCTAGAGGCCATCGATCCCAAGAGCTTGGGCGAGGGCAAGGACAC
CGCGATGCGTAATGTCCGCTTCGGCCGCATCCTTGGCAACACCGTGGTGC
AGTTCGAGAAGGCCGAGAACAGTTCGCTGAATCTGCAGGGCAAGAGCAAG
GGCAAGGTGGTCCGCCAGTCCATTATAAACCCGGATTGGGACTTTGGCAA
AATGGGCATCGGTGGCCTGGACAAGGAATTCAATTCGATATTTCGACGAG
CCTTCGCATCCCGTGTCTTCCCACCGGAACTGGTCGAGCAGCTGGGCTGC
AAGCATGTCAAGGGCATTCTACTTTATGGTCCACCGGGTACGGGCAAAAC
TCTGATGGCTCGCCAAATCGGAACTATGTTAAACGCCCGGGAGCCGAAAA
TCGTCAACGGTCCACAGATCCTGGACAAGTACGTGGGCGAATCGGAGGCC
AATGTCCGGCGTCTGTTTGCCGAGGCGGAGGAGGAGGAGAAACGCCTAGG
TCCCAACAGTGGACTACATATCATCATCTTCGACGAGATCGATGCCATTT
GCAAGCAGCGTGGCTCCGTGGCCGGAAATAGTGGTGTCCACGACACCGTC
GTCAATCAGTTGCTAACCAAAATCGATGGCGTTGATCAGCTGAACAACAT
TCTCGTTATCGGCATGACCAATCGCAGGGACATGATCGATGAGGCTTTGC
TGCGACCGGGTCGCCTCGAGGTCCAAATGGAGATCAGCCTGCCCAACGAG
CAGGGTCGCGTCCAGATTCTCAATATCCACACCAAGCGGATGCGTGAATT
CAACAAGATTAACGACGATGTGGACAACAAGGAGATCGCTGCGCTGACCA
AGAATTTCAGCGGTGCCGAGCTGGAGGGTTTGGTCCGTGCCGCCCAGTCG
AGTGCCATGAACCGACTGATCAAGGCCGATGCCAAGGTGACCGTTGATCC
TGAGGCCATGGAAAAGTTAAAGGTCAATCGAGATGATTTCCTGCACTCGC
TGGAGCATGACATTAAGCCGGCATTCGGTACGGCCCAGGAGATTCTCGAC
AATATGCTGGCCCGCGGTGTTATCAACTGGGGAGCACCGGTTAGCAATCT
CCTCGAGGACGGCATGCTGTATGTGCAGCAGGCCAAGGCTCCAGAATCTA
GCGGCTTGGTCTCCGTACTCGTGGCCGGAGCACCCAACTCTGGCAAGACG
GCACTGGCCGCTCAGCTTGCCAAGATGTCAGACTTTCCGTTCGTGAAGGT
CTGCTCGCCAGAGGACATGGTCGGCTACACTGAATCGGCCAAGTGCCTGC
ACATTCGTAAGATCTTCGACGACGCGTATCGTTCCATGCTTAGCTGCATT
GTGGTGGACAATGTGGAGCGTCTGCTGGACTACGGATCGATTGGGCCGCG
ATATTCCAATATGACGCTACAGGCACTGCTGGTGCTGCTCAAGAAACAGC
CGCCAAAGGGCCGCAAATTGCTCATATTGTGCACATCTAGCAGGAGGGAG
GTCCTGGAAGAGATGGAGATGCTGACGGCCTTCACCTCGGTGCTCCACGT
GCCCAATCTTTCCAAGCCCGACCACGTTCTGGCCGTGCTGGAGAACACGG
ATATCTTTAGCAAGGGCGAAATCCAGGCGATTGGCAAGAAGATGGCCGGA
AAACGTGTGTTTATTGGCATCAAGAAGCTGCTGGGTCTCATTGACATGGC
TAGGCAAACGGAGCAATCACAGCGGGCCATAAAGTTCCTGTCCAAGATGG
AAGAGGAGGGTGGTCTCGACATGGTGGCGCGGCAGTAAGGCATCTTAAAC
TGCATGTGCCCAAATGGAGTCTCAATTATTAGCTTCTAAGTGCTAAGGAC
GGGCGATGAATAGCGATGAAACCAAATCAGAATCTCAATGTACACGTACA
TATACACCGCTAAACATATACACAGATATATAGAGTTATATATATATATA
CGATCCAGGCTTCGCGATGTTTGTTCGGTCCCAAAGCCCAGATAAAAATC
ACAATCCACATCCCGGAGGAGTTTCGTGTGCTTCTGAGTTCCCCCACAGA
GCTCAATCAAATCAGACAGATATGTGAGACCCGTGACCTGAAGATGATGG
CATATAAATGACATAATATATGGCTTAAATGGACAGATACTCAATTACAT
TTATAAATAATTAACACGCGTAGCCACTAACTCGTTAAAGGCATGATAAT
CTTTCTCGTTACCTTTTAATTTTAGGACTTTTGCTTCAGTAAATTCTCAA
TAGGAAACGAAAAAACGGGAGAAAACACCAAAGTATTTGCCTTTGGGCAT
TGTGAACGTTGTTTATCGGTAACTAAACTAATTAAATATTTATTAAATCA
AATATTGTTAACCGCCAATGTTATAATTATATCTTGAATAAAGTAAAACA
AACTTAAATTCCAAAAAAAAAAAAAAAA

RE33604.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:34:36
Subject Length Description Subject Range Query Range Score Percent Strand
comt-RA 3136 comt-RA 3..3115 2..3114 15535 99.9 Plus
Nsf2-RA 2907 Nsf2-RA 774..1592 847..1665 1890 82 Plus
Nsf2.a 3477 Nsf2.a 686..1504 847..1665 1890 82 Plus
Nsf2-RA 2907 Nsf2-RA 1804..2219 1877..2292 670 77.4 Plus
Nsf2.a 3477 Nsf2.a 1716..2131 1877..2292 670 77.4 Plus
Nsf2-RA 2907 Nsf2-RA 351..654 421..724 530 78.2 Plus
Nsf2.a 3477 Nsf2.a 263..566 421..724 530 78.2 Plus
Nsf2-RA 2907 Nsf2-RA 198..326 274..402 240 79 Plus
Nsf2.a 3477 Nsf2.a 110..238 274..402 240 79 Plus
Nsf2-RA 2907 Nsf2-RA 1636..1766 1709..1839 235 78.6 Plus
Nsf2.a 3477 Nsf2.a 1548..1678 1709..1839 235 78.6 Plus
Nsf2-RA 2907 Nsf2-RA 697..767 770..840 220 87.3 Plus
Nsf2.a 3477 Nsf2.a 609..679 770..840 220 87.3 Plus
Nsf2-RA 2907 Nsf2-RA 2257..2401 2330..2474 215 76.5 Plus
Nsf2.a 3477 Nsf2.a 2169..2313 2330..2474 215 76.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:15:10
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 13150606..13152235 568..2197 8030 99.5 Plus
chrX 22417052 chrX 13152545..13153300 2357..3112 3780 100 Plus
chr3R 27901430 chr3R 9660730..9661598 1638..770 2005 82 Minus
chrX 22417052 chrX 13149808..13150065 2..259 1290 100 Plus
chrX 22417052 chrX 13150314..13150532 349..567 1080 99.5 Plus
chr3R 27901430 chr3R 9659655..9660420 2474..1709 905 74.5 Minus
chrX 22417052 chrX 13152315..13152475 2195..2355 805 100 Plus
chr3R 27901430 chr3R 9662325..9662645 663..349 475 77.3 Minus
chrX 22417052 chrX 13150147..13150240 260..353 455 98.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:50:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:15:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13259795..13261424 568..2197 8135 99.9 Plus
X 23542271 X 13261733..13262490 2357..3114 3790 100 Plus
3R 32079331 3R 13835775..13836643 1638..770 2020 82.2 Minus
X 23542271 X 13258997..13259254 2..259 1290 100 Plus
X 23542271 X 13259503..13259721 349..567 1095 100 Plus
3R 32079331 3R 13834700..13835465 2474..1709 935 74.8 Minus
X 23542271 X 13261503..13261663 2195..2355 805 100 Plus
3R 32079331 3R 13837382..13837702 663..349 490 77.6 Minus
X 23542271 X 13259336..13259429 260..353 455 98.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:02:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 13267893..13269522 568..2197 8135 99.9 Plus
X 23527363 X 13269831..13270588 2357..3114 3790 100 Plus
3R 31820162 3R 13576606..13577397 1638..847 1860 82.3 Minus
X 23527363 X 13267095..13267352 2..259 1290 100 Plus
X 23527363 X 13267601..13267819 349..567 1095 100 Plus
X 23527363 X 13269601..13269761 2195..2355 805 100 Plus
3R 31820162 3R 13575713..13576128 2292..1877 670 77.4 Minus
3R 31820162 3R 13578213..13578455 663..421 465 79.4 Minus
X 23527363 X 13267434..13267527 260..353 455 98.9 Plus
3R 31820162 3R 13576166..13576296 1839..1709 235 78.6 Minus
3R 31820162 3R 13577404..13577474 840..770 220 87.3 Minus
3R 31820162 3R 13575531..13575675 2474..2330 215 76.5 Minus
3R 31820162 3R 13578480..13578533 402..349 150 85.1 Minus
Blast to na_te.dros performed 2019-03-15 20:15:08
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker4 7359 Stalker4 STALKER4 7359bp 255..330 2859..2783 130 64.9 Minus
Stalker4 7359 Stalker4 STALKER4 7359bp 7211..7286 2859..2783 130 64.9 Minus
Stalker 7256 Stalker STALKER 7256bp 255..330 2859..2783 130 64.9 Minus
Stalker 7256 Stalker STALKER 7256bp 7104..7179 2859..2783 130 64.9 Minus

RE33604.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:16:16 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 13149806..13150065 1..259 99 -> Plus
chrX 13150147..13150235 260..348 100 -> Plus
chrX 13150314..13150532 349..567 99 -> Plus
chrX 13150606..13152234 568..2196 99 -> Plus
chrX 13152317..13152475 2197..2355 100 -> Plus
chrX 13152544..13153300 2356..3112 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:10:28 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
comt-RA 1..2238 251..2488 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:56:59 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
comt-RA 1..2238 251..2488 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:09:42 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
comt-RA 1..2238 251..2488 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:21:46 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
comt-RA 1..2238 251..2488 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:18:44 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
comt-RA 1..2238 251..2488 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:21:25 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
comt-RA 1..3113 1..3112 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:56:59 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
comt-RA 1..3111 2..3112 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:09:42 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
comt-RA 1..3087 26..3112 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:21:46 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
comt-RA 1..3113 1..3112 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:18:44 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
comt-RA 1..3087 26..3112 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:16:16 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
X 13258995..13259254 1..259 99 -> Plus
X 13259336..13259424 260..348 100 -> Plus
X 13259503..13259721 349..567 100 -> Plus
X 13259795..13261423 568..2196 99 -> Plus
X 13261505..13261663 2197..2355 100 -> Plus
X 13261732..13262488 2356..3112 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:16:16 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
X 13258995..13259254 1..259 99 -> Plus
X 13259336..13259424 260..348 100 -> Plus
X 13259503..13259721 349..567 100 -> Plus
X 13259795..13261423 568..2196 99 -> Plus
X 13261505..13261663 2197..2355 100 -> Plus
X 13261732..13262488 2356..3112 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:16:16 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
X 13258995..13259254 1..259 99 -> Plus
X 13259336..13259424 260..348 100 -> Plus
X 13259503..13259721 349..567 100 -> Plus
X 13259795..13261423 568..2196 99 -> Plus
X 13261505..13261663 2197..2355 100 -> Plus
X 13261732..13262488 2356..3112 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:09:42 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13153369..13153457 260..348 100 -> Plus
arm_X 13153536..13153754 349..567 100 -> Plus
arm_X 13153028..13153287 1..259 99 -> Plus
arm_X 13153828..13155456 568..2196 99 -> Plus
arm_X 13155538..13155696 2197..2355 100 -> Plus
arm_X 13155765..13156521 2356..3112 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:56:37 Download gff for RE33604.complete
Subject Subject Range Query Range Percent Splice Strand
X 13267093..13267352 1..259 99 -> Plus
X 13267434..13267522 260..348 100 -> Plus
X 13267601..13267819 349..567 100 -> Plus
X 13267893..13269521 568..2196 99 -> Plus
X 13269603..13269761 2197..2355 100 -> Plus
X 13269830..13270586 2356..3112 99   Plus

RE33604.pep Sequence

Translation from 250 to 2487

> RE33604.pep
MAYILKATKCPTDELSLTNRAIVNVGDFPEEIKYADISPAPGQHFIFALE
KTVEVPSGYVGFSLVQRKWAMVSINQELEVRPYRFDASSDVITCVSFETD
FLQKKTVSQEPYDSDQMAKEFIMQFAGMALTVGQSLVFNFKDKKLLGLAV
KSLEAIDPKSLGEGKDTAMRNVRFGRILGNTVVQFEKAENSSLNLQGKSK
GKVVRQSIINPDWDFGKMGIGGLDKEFNSIFRRAFASRVFPPELVEQLGC
KHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEA
NVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDTV
VNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNE
QGRVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEGLVRAAQS
SAMNRLIKADAKVTVDPEAMEKLKVNRDDFLHSLEHDIKPAFGTAQEILD
NMLARGVINWGAPVSNLLEDGMLYVQQAKAPESSGLVSVLVAGAPNSGKT
ALAAQLAKMSDFPFVKVCSPEDMVGYTESAKCLHIRKIFDDAYRSMLSCI
VVDNVERLLDYGSIGPRYSNMTLQALLVLLKKQPPKGRKLLILCTSSRRE
VLEEMEMLTAFTSVLHVPNLSKPDHVLAVLENTDIFSKGEIQAIGKKMAG
KRVFIGIKKLLGLIDMARQTEQSQRAIKFLSKMEEEGGLDMVARQ*

RE33604.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:59:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21411-PA 745 GF21411-PA 1..745 1..745 3870 97.6 Plus
Dana\GF16398-PA 747 GF16398-PA 1..745 1..744 3370 85.3 Plus
Dana\GF11135-PA 801 GF11135-PA 137..571 153..601 425 31 Plus
Dana\GF10639-PA 972 GF10639-PA 682..947 208..493 393 37.4 Plus
Dana\GF11135-PA 801 GF11135-PA 455..705 198..462 379 35.2 Plus
Dana\GF21021-PA 397 GF21021-PA 137..396 214..490 379 36.2 Plus
Dana\GF10639-PA 972 GF10639-PA 262..483 220..455 247 32.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:59:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17764-PA 745 GG17764-PA 1..745 1..745 3900 98.3 Plus
Dere\GG17019-PA 751 GG17019-PA 5..749 1..744 3317 84.3 Plus
Dere\TER94-PA 801 GG24127-PA 137..571 153..601 415 30.9 Plus
Dere\GG14421-PA 935 GG14421-PA 648..872 211..448 403 41.1 Plus
Dere\TER94-PA 801 GG24127-PA 455..705 198..462 381 35.2 Plus
Dere\GG17681-PA 397 GG17681-PA 137..396 214..490 379 36.2 Plus
Dere\GG14421-PA 935 GG14421-PA 249..470 220..455 241 31.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:59:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24638-PA 745 GH24638-PA 1..745 1..745 3702 93.8 Plus
Dgri\GH14042-PA 750 GH14042-PA 5..748 1..744 3431 85.9 Plus
Dgri\GH20288-PA 802 GH20288-PA 138..572 153..601 424 31 Plus
Dgri\GH14878-PA 957 GH14878-PA 667..894 208..448 401 41 Plus
Dgri\GH20288-PA 802 GH20288-PA 456..706 198..462 379 35.2 Plus
Dgri\GH17814-PA 397 GH17814-PA 137..396 214..490 378 36.2 Plus
Dgri\GH14878-PA 957 GH14878-PA 265..486 220..455 251 32.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:24:28
Subject Length Description Subject Range Query Range Score Percent Strand
comt-PB 745 CG1618-PB 1..745 1..745 3766 100 Plus
comt-PA 745 CG1618-PA 1..745 1..745 3766 100 Plus
Nsf2-PC 752 CG33101-PC 6..746 2..741 3208 84.5 Plus
Nsf2-PB 752 CG33101-PB 6..746 2..741 3208 84.5 Plus
Nsf2-PA 752 CG33101-PA 6..746 2..741 3208 84.5 Plus
CG31495-PB 341 CG31495-PB 2..327 393..738 522 38.6 Plus
CG31495-PA 341 CG31495-PA 2..327 393..738 522 38.6 Plus
TER94-PD 759 CG2331-PD 95..529 153..601 431 30.9 Plus
TER94-PA 801 CG2331-PA 137..571 153..601 431 30.9 Plus
TER94-PE 825 CG2331-PE 162..596 153..601 431 30.9 Plus
TER94-PC 826 CG2331-PC 162..596 153..601 431 30.9 Plus
smid-PI 910 CG8571-PI 627..854 213..455 389 39.8 Plus
smid-PG 910 CG8571-PG 627..854 213..455 389 39.8 Plus
smid-PH 927 CG8571-PH 644..871 213..455 389 39.8 Plus
smid-PC 943 CG8571-PC 660..887 213..455 389 39.8 Plus
smid-PA 944 CG8571-PA 661..888 213..455 389 39.8 Plus
TER94-PD 759 CG2331-PD 413..663 198..462 377 35.2 Plus
TER94-PA 801 CG2331-PA 455..705 198..462 377 35.2 Plus
TER94-PE 825 CG2331-PE 480..730 198..462 377 35.2 Plus
TER94-PC 826 CG2331-PC 480..730 198..462 377 35.2 Plus
Rpt4-PB 397 CG3455-PB 143..396 220..490 377 36.3 Plus
Rpt6-PA 405 CG1489-PA 150..393 220..479 364 37.4 Plus
CG5776-PB 799 CG5776-PB 537..766 220..460 364 36.5 Plus
CG5776-PA 799 CG5776-PA 537..766 220..460 364 36.5 Plus
Rpt4R-PB 398 CG7257-PB 144..397 220..490 359 34.4 Plus
Rpt4R-PA 398 CG7257-PA 144..397 220..490 359 34.4 Plus
Rpt6R-PA 399 CG2241-PA 145..364 220..453 355 38.3 Plus
Rpt2-PB 439 CG5289-PB 186..423 220..485 345 33 Plus
Rpt2-PA 439 CG5289-PA 186..423 220..485 345 33 Plus
Pex1-PA 1006 CG6760-PA 743..943 242..457 343 36.1 Plus
Rpt5-PA 428 CG10370-PA 177..399 220..455 339 36.6 Plus
Rpt1-PA 433 CG1341-PA 177..414 220..474 338 35 Plus
YME1L-PB 736 CG3499-PB 322..547 242..473 331 35.5 Plus
YME1L-PD 739 CG3499-PD 325..550 242..473 331 35.5 Plus
YME1L-PC 740 CG3499-PC 326..551 242..473 331 35.5 Plus
Pex6-PC 897 CG11919-PC 569..893 166..504 322 30.5 Plus
Pex6-PD 899 CG11919-PD 571..895 166..504 322 30.5 Plus
Rpt3R-PD 405 CG9475-PD 139..401 207..482 321 33.8 Plus
Rpt3R-PC 405 CG9475-PC 139..401 207..482 321 33.8 Plus
Rpt3-PB 413 CG16916-PB 147..388 207..457 318 34.4 Plus
Rpt3-PA 413 CG16916-PA 147..388 207..457 318 34.4 Plus
CG6512-PB 697 CG6512-PB 151..417 177..448 308 31.8 Plus
CG6512-PA 826 CG6512-PA 280..546 177..448 308 31.8 Plus
Spg7-PC 819 CG2658-PC 354..625 233..518 296 31.5 Plus
Spg7-PA 819 CG2658-PA 354..625 233..518 296 31.5 Plus
CG12010-PB 717 CG12010-PB 478..682 247..459 276 34.2 Plus
Kat60-PA 572 CG10229-PA 327..543 254..480 267 34.8 Plus
Kat60-PB 605 CG10229-PB 360..576 254..480 267 34.8 Plus
Fign-PB 523 CG3326-PB 252..497 220..484 243 30 Plus
Fign-PA 523 CG3326-PA 252..497 220..484 243 30 Plus
smid-PI 910 CG8571-PI 219..440 220..455 239 31.4 Plus
smid-PG 910 CG8571-PG 219..440 220..455 239 31.4 Plus
smid-PH 927 CG8571-PH 236..457 220..455 239 31.4 Plus
smid-PC 943 CG8571-PC 252..473 220..455 239 31.4 Plus
smid-PA 944 CG8571-PA 253..474 220..455 239 31.4 Plus
Vps4-PB 442 CG6842-PB 166..346 254..448 236 33.2 Plus
Vps4-PA 442 CG6842-PA 166..346 254..448 236 33.2 Plus
spas-PF 489 CG5977-PF 237..457 242..460 230 32.3 Plus
spas-PE 551 CG5977-PE 299..519 242..460 230 32.3 Plus
CG4701-PA 384 CG4701-PA 33..320 153..458 225 28.1 Plus
CG5776-PB 799 CG5776-PB 271..640 217..608 192 23.3 Plus
CG5776-PA 799 CG5776-PA 271..640 217..608 192 23.3 Plus
CG12010-PB 717 CG12010-PB 251..623 285..668 162 22.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:59:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21685-PA 745 GI21685-PA 1..745 1..745 3716 94.4 Plus
Dmoj\GI24416-PA 750 GI24416-PA 5..748 1..744 3410 85.1 Plus
Dmoj\GI19458-PA 801 GI19458-PA 137..571 153..601 427 31 Plus
Dmoj\GI12852-PA 307 GI12852-PA 48..261 242..466 382 40.3 Plus
Dmoj\GI19458-PA 801 GI19458-PA 455..705 198..462 380 35.2 Plus
Dmoj\GI16424-PA 397 GI16424-PA 137..396 214..490 379 36.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:59:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13314-PA 745 GL13314-PA 1..745 1..745 3822 95.6 Plus
Dper\GL24082-PA 742 GL24082-PA 1..740 5..744 3395 85.7 Plus
Dper\GL11509-PA 626 GL11509-PA 137..571 153..601 418 31.2 Plus
Dper\GL20276-PA 397 GL20276-PA 137..396 214..490 375 37.1 Plus
Dper\GL16409-PA 269 GL16409-PA 14..234 220..453 365 39 Plus
Dper\GL11509-PA 626 GL11509-PA 455..601 198..354 190 32.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:59:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22832-PA 745 GA22832-PA 1..745 1..745 3822 95.6 Plus
Dpse\GA17281-PA 742 GA17281-PA 1..740 5..744 3394 85.7 Plus
Dpse\GA15351-PA 801 GA15351-PA 137..571 153..601 425 31 Plus
Dpse\GA15351-PA 801 GA15351-PA 455..705 198..462 380 35.2 Plus
Dpse\GA17461-PA 397 GA17461-PA 137..396 214..490 375 37.1 Plus
Dpse\GA13327-PA 405 GA13327-PA 150..370 220..453 364 39 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:59:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25905-PA 752 GM25905-PA 6..746 2..741 3323 84.5 Plus
Dsec\GM11611-PA 149 GM11611-PA 1..107 1..107 578 98.1 Plus
Dsec\GM25904-PA 341 GM25904-PA 4..327 395..738 536 38.7 Plus
Dsec\GM21173-PA 801 GM21173-PA 137..571 153..601 426 31 Plus
Dsec\GM14837-PA 944 GM14837-PA 654..881 208..448 400 41 Plus
Dsec\GM21173-PA 801 GM21173-PA 455..705 198..462 380 35.2 Plus
Dsec\GM14837-PA 944 GM14837-PA 251..472 220..455 240 31.2 Plus
Dsec\GM11611-PA 149 GM11611-PA 105..149 701..745 220 97.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:59:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17110-PA 707 GD17110-PA 1..697 9..705 3683 99 Plus
Dsim\GD20473-PA 669 GD20473-PA 6..663 2..741 2666 71.4 Plus
Dsim\GD20472-PA 282 GD20472-PA 4..270 395..681 451 38.2 Plus
Dsim\GD10706-PA 801 GD10706-PA 137..571 153..601 426 31 Plus
Dsim\GD10706-PA 801 GD10706-PA 455..705 198..462 380 35.2 Plus
Dsim\GD16958-PA 400 GD16958-PA 146..365 220..453 365 39.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:59:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15864-PA 745 GJ15864-PA 1..745 1..745 3673 93 Plus
Dvir\GJ14275-PA 750 GJ14275-PA 5..748 1..744 3369 84.1 Plus
Dvir\GJ21209-PA 801 GJ21209-PA 137..571 153..601 425 31 Plus
Dvir\GJ12996-PA 933 GJ12996-PA 643..870 208..448 399 41.4 Plus
Dvir\GJ21209-PA 801 GJ21209-PA 455..705 198..462 379 35.2 Plus
Dvir\GJ15827-PA 397 GJ15827-PA 137..396 214..490 376 35.8 Plus
Dvir\GJ12996-PA 933 GJ12996-PA 253..474 220..455 249 32.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18341-PA 745 GK18341-PA 1..745 1..745 3742 95.4 Plus
Dwil\GK13058-PA 750 GK13058-PA 5..748 1..744 3427 85.9 Plus
Dwil\GK21952-PA 801 GK21952-PA 137..571 153..601 426 31 Plus
Dwil\GK21952-PA 801 GK21952-PA 455..705 198..462 380 35.2 Plus
Dwil\GK25687-PA 397 GK25687-PA 137..396 214..490 374 36.2 Plus
Dwil\GK12331-PA 403 GK12331-PA 149..357 220..441 370 40.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17054-PA 745 GE17054-PA 1..745 1..745 3909 98.5 Plus
Dyak\GE24413-PA 751 GE24413-PA 5..749 1..744 3346 85 Plus
Dyak\GE24412-PA 338 GE24412-PA 2..332 393..738 553 39.2 Plus
Dyak\GE19324-PA 801 GE19324-PA 137..571 153..601 417 30.9 Plus
Dyak\GE21612-PA 931 GE21612-PA 645..869 211..448 400 41.1 Plus
Dyak\GE19324-PA 801 GE19324-PA 455..705 198..462 380 35.2 Plus
Dyak\GE21612-PA 931 GE21612-PA 247..468 220..455 241 31.2 Plus

RE33604.hyp Sequence

Translation from 250 to 2487

> RE33604.hyp
MAYILKATKCPTDELSLTNRAIVNVGDFPEEIKYADISPAPGQHFIFALE
KTVEVPSGYVGFSLVQRKWAMVSINQELEVRPYRFDASSDVITCVSFETD
FLQKKTVSQEPYDSDQMAKEFIMQFAGMALTVGQSLVFNFKDKKLLGLAV
KSLEAIDPKSLGEGKDTAMRNVRFGRILGNTVVQFEKAENSSLNLQGKSK
GKVVRQSIINPDWDFGKMGIGGLDKEFNSIFRRAFASRVFPPELVEQLGC
KHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEA
NVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDTV
VNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNE
QGRVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEGLVRAAQS
SAMNRLIKADAKVTVDPEAMEKLKVNRDDFLHSLEHDIKPAFGTAQEILD
NMLARGVINWGAPVSNLLEDGMLYVQQAKAPESSGLVSVLVAGAPNSGKT
ALAAQLAKMSDFPFVKVCSPEDMVGYTESAKCLHIRKIFDDAYRSMLSCI
VVDNVERLLDYGSIGPRYSNMTLQALLVLLKKQPPKGRKLLILCTSSRRE
VLEEMEMLTAFTSVLHVPNLSKPDHVLAVLENTDIFSKGEIQAIGKKMAG
KRVFIGIKKLLGLIDMARQTEQSQRAIKFLSKMEEEGGLDMVARQ*

RE33604.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:43:41
Subject Length Description Subject Range Query Range Score Percent Strand
comt-PB 745 CG1618-PB 1..745 1..745 3766 100 Plus
comt-PA 745 CG1618-PA 1..745 1..745 3766 100 Plus
Nsf2-PC 752 CG33101-PC 6..746 2..741 3208 84.5 Plus
Nsf2-PB 752 CG33101-PB 6..746 2..741 3208 84.5 Plus
Nsf2-PA 752 CG33101-PA 6..746 2..741 3208 84.5 Plus