BDGP Sequence Production Resources |
Search the DGRC for RE33762
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 337 |
Well: | 62 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG10086-RA |
Protein status: | RE33762.pep: gold |
Preliminary Size: | 1410 |
Sequenced Size: | 1872 |
Gene | Date | Evidence |
---|---|---|
CG10086 | 2001-12-14 | Blastp of sequenced clone |
CG10086 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10086 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10086 | 2008-04-29 | Release 5.5 accounting |
CG10086 | 2008-08-15 | Release 5.9 accounting |
CG10086 | 2008-12-18 | 5.12 accounting |
1872 bp (1872 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071310
> RE33762.complete AGTTCGTGTTTAGCAGCGGGCGCGTTAGGATCGCTCGCAAATCTAAAAGC TCTGGAGAGGCATAAGCCCATTACCTATTCGCCAACATGTCGAAGAACTG CATGATAACGTTCGACCAGAATGAGCACGGCACCTACTTCACCGGCCAGG TGATAACCGGCAAGGTGATTGTCAATCTGAACAAGACCAAGAAACTGCGA GGAATAAAACTGCAAATAAGTGGCTATGCGCAAGCCCAGTGGCGCATCCG CAGACATGGTAAGGCGGTGGCAATCCAAAACCCCAAGAAGCGATCAAAGC ACCAGTACAGCGGGCGGGAGGACTATATAGCCTCCACCACTTACCTCATG GGTTCCGAGCAGGGCAGCAACTTTAACATGGACGCCGGCACGTACACCTA CACTTTTGCTTGCCCCATTCCCAGCCACTGCCCCTCGTCCTTCGAGGGTG CCTATGGACACATCCGGTATCTGGCCAAGGTCACCTTTTTGAAGCCAGGA GCTTCCAATCGCACCCACAACGTGGGCTTCACTGTGCTAAAGCTGCTGGA CTTGAACCAGGAGACCAAGATGCTCCGGGAACCGGCGAGCAATGAAGCCG TGGAACACTTTTGCCTGATGCACACGAAGCCCGTGCAGTTGAAGGTCACT CTCCAGCAGCAGGGCTATGTTCCGGGTCAGTTCATGTTGATCCACGCCCA TGTGCGTAATGACTCCAGCTCCGATTGTCGGAAGCTACTGATCATGCTGC ATTTGAGAGCCACATACACGGCGGATACGCCCTCGCTACGCACCACATCC GAGAAGATAATGCTGGTGAAGCGCGAGTGCGGTCCGGTGGCTCATAATGC GCAGAGGACTTACACGGAAACCCTGAGGATTCCGGCAACGGCGCCCACCT GCGAGCACCTAAGCAAGGTGGTGCGCGTATCTTACGAAGTGCGTGTGGTG GCTGTTATGAACTGGCTTATGGCTAATCCCCGGCTCATAATCCCTGTGAC TATTGGCAACGTGCCCCTGGCAACTGCGGTGTCCGGACCGGACTTCCTGC CAACTAACGCCTTCCCATCTGGAAGTTCGCTGCCTGCCGACTTGCCATGC ACCTCTACAAGGGCCATGGAACTGGCTCAGATGGCCGCAAGCGGGGTCAG CAACTCCGGCTACGAGATGGCCGAGGATCTAGAGGACTTCGAGCTTCCAG AGGATGGAGATGATGAGTTGGAGGCTGCCGACGATTTCGTACCAGATTTA CCTCCTCCTACCTACGAGCAGGCCATGTTCATGACCACTGATATTGCGGA CACGGACGCGAACACGGTCAGCGAGGCCTCCCGATTTACTCCACGCTATC CGGTCTTCGATGTGGACACCTTCCAGAGCCCGCCGCCAAATCCTCCCCAG AAGAAAAGGCGCCGCCGACGCAGACGTCCTGCCGATCCTGGACAGTCGAA GCAACAACCGGAGAAACAACCAGTGGAGTCACCCGTGCAGATCTGAGGGC AGTTATCGCGAAAAATCACGACTATATCTTATCTCGGCAGTATTTATTTC TTTTACGGTTCGCCAGTGTACTTACCAAAATGTTTACTATATATGTATGT ATATCGGAATGATAAACAACCCAGAATATAAAAGTGTCTACTGGGTGATA CGCGATAAATTGCGACTATAGCCTAGACAACCAAGTCCATGAAGGCATTG AACTACAAATTTATTTATTCATTTATAAATTAAATTGAGTGGAGGACTTC TAGCTCAGTCCGTGAGTTTAAATACTTATGAGAGCTAGAAATTTTGATTT ACGCATACATGCTCCCAATTTCTAATTCTATTGCTTGACAATTTCCATTA AAATGCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10086-RA | 2020 | CG10086-RA | 149..2014 | 1..1866 | 9315 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 3617729..3618780 | 200..1251 | 5245 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 3618939..3619543 | 1252..1856 | 3025 | 100 | Plus |
chr3R | 27901430 | chr3R | 3616701..3616902 | 1..202 | 1010 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 7791669..7792720 | 200..1251 | 5245 | 99.9 | Plus |
3R | 32079331 | 3R | 7792879..7793493 | 1252..1866 | 3075 | 100 | Plus |
3R | 32079331 | 3R | 7790641..7790842 | 1..202 | 1010 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 7532500..7533551 | 200..1251 | 5245 | 99.9 | Plus |
3R | 31820162 | 3R | 7533710..7534324 | 1252..1866 | 3075 | 100 | Plus |
3R | 31820162 | 3R | 7531472..7531673 | 1..202 | 1010 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 4142..4171 | 1738..1709 | 114 | 86.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 3616701..3616901 | 1..201 | 100 | -> | Plus |
chr3R | 3617731..3618780 | 202..1251 | 99 | -> | Plus |
chr3R | 3618939..3619543 | 1252..1856 | 95 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10086-RA | 1..1410 | 87..1496 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10086-RA | 1..1410 | 87..1496 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10086-RA | 1..1410 | 87..1496 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10086-RA | 1..1410 | 87..1496 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10086-RA | 1..1410 | 87..1496 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10086-RA | 1..1856 | 1..1856 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10086-RA | 1..1856 | 1..1856 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10086-RA | 9..1864 | 1..1856 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10086-RA | 1..1856 | 1..1856 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10086-RA | 9..1864 | 1..1856 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7790641..7790841 | 1..201 | 100 | -> | Plus |
3R | 7791671..7792720 | 202..1251 | 99 | -> | Plus |
3R | 7792879..7793483 | 1252..1856 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7790641..7790841 | 1..201 | 100 | -> | Plus |
3R | 7791671..7792720 | 202..1251 | 99 | -> | Plus |
3R | 7792879..7793483 | 1252..1856 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7790641..7790841 | 1..201 | 100 | -> | Plus |
3R | 7791671..7792720 | 202..1251 | 99 | -> | Plus |
3R | 7792879..7793483 | 1252..1856 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 3616363..3616563 | 1..201 | 100 | -> | Plus |
arm_3R | 3617393..3618442 | 202..1251 | 99 | -> | Plus |
arm_3R | 3618601..3619205 | 1252..1856 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7532502..7533551 | 202..1251 | 99 | -> | Plus |
3R | 7533710..7534314 | 1252..1856 | 100 | Plus | |
3R | 7531472..7531672 | 1..201 | 100 | -> | Plus |
Translation from 86 to 1495
> RE33762.pep MSKNCMITFDQNEHGTYFTGQVITGKVIVNLNKTKKLRGIKLQISGYAQA QWRIRRHGKAVAIQNPKKRSKHQYSGREDYIASTTYLMGSEQGSNFNMDA GTYTYTFACPIPSHCPSSFEGAYGHIRYLAKVTFLKPGASNRTHNVGFTV LKLLDLNQETKMLREPASNEAVEHFCLMHTKPVQLKVTLQQQGYVPGQFM LIHAHVRNDSSSDCRKLLIMLHLRATYTADTPSLRTTSEKIMLVKRECGP VAHNAQRTYTETLRIPATAPTCEHLSKVVRVSYEVRVVAVMNWLMANPRL IIPVTIGNVPLATAVSGPDFLPTNAFPSGSSLPADLPCTSTRAMELAQMA ASGVSNSGYEMAEDLEDFELPEDGDDELEAADDFVPDLPPPTYEQAMFMT TDIADTDANTVSEASRFTPRYPVFDVDTFQSPPPNPPQKKRRRRRRRPAD PGQSKQQPEKQPVESPVQI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17683-PA | 477 | GF17683-PA | 1..477 | 1..469 | 2210 | 87.2 | Plus |
Dana\GF17285-PA | 436 | GF17285-PA | 1..408 | 1..434 | 631 | 32.8 | Plus |
Dana\GF17286-PA | 440 | GF17286-PA | 1..306 | 1..317 | 560 | 37.8 | Plus |
Dana\GF17283-PA | 439 | GF17283-PA | 4..310 | 5..313 | 543 | 35 | Plus |
Dana\GF17284-PA | 415 | GF17284-PA | 1..395 | 1..426 | 532 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14185-PA | 469 | GG14185-PA | 1..469 | 1..469 | 2454 | 96.2 | Plus |
Dere\GG24984-PA | 435 | GG24984-PA | 1..407 | 1..434 | 671 | 35.3 | Plus |
Dere\GG24962-PA | 438 | GG24962-PA | 4..306 | 5..311 | 528 | 33.9 | Plus |
Dere\GG24973-PA | 403 | GG24973-PA | 1..386 | 1..428 | 524 | 29.5 | Plus |
Dere\GG24995-PA | 416 | GG24995-PA | 24..308 | 21..314 | 467 | 34.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18318-PA | 461 | GH18318-PA | 1..461 | 1..469 | 1782 | 72.9 | Plus |
Dgri\GH19257-PA | 430 | GH19257-PA | 1..408 | 1..432 | 637 | 34.3 | Plus |
Dgri\GH19258-PA | 404 | GH19258-PA | 1..303 | 1..312 | 527 | 34.3 | Plus |
Dgri\GH19256-PA | 433 | GH19256-PA | 1..306 | 1..311 | 502 | 33.9 | Plus |
Dgri\GH17389-PA | 407 | GH17389-PA | 4..407 | 3..436 | 437 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10086-PA | 469 | CG10086-PA | 1..469 | 1..469 | 2465 | 100 | Plus |
CG18745-PA | 433 | CG18745-PA | 1..405 | 1..434 | 659 | 33.9 | Plus |
CG18747-PB | 418 | CG18747-PB | 1..399 | 1..392 | 541 | 31 | Plus |
CG18746-PA | 438 | CG18746-PA | 4..306 | 5..311 | 521 | 33.9 | Plus |
CG18748-PC | 409 | CG18748-PC | 5..392 | 5..428 | 517 | 28.3 | Plus |
CG1105-PA | 422 | CG1105-PA | 4..419 | 3..433 | 448 | 26.8 | Plus |
CG2993-PA | 511 | CG2993-PA | 1..312 | 1..321 | 377 | 27.5 | Plus |
CG2993-PB | 524 | CG2993-PB | 1..312 | 1..321 | 377 | 27.5 | Plus |
CG2993-PC | 545 | CG2993-PC | 1..312 | 1..321 | 377 | 27.5 | Plus |
CG18748-PB | 359 | CG18748-PB | 42..342 | 98..428 | 373 | 28.1 | Plus |
Leash-PA | 520 | CG4674-PA | 3..303 | 2..306 | 331 | 29.5 | Plus |
CG14696-PA | 457 | CG14696-PA | 1..338 | 1..333 | 329 | 27.4 | Plus |
CG2641-PA | 429 | CG2641-PA | 1..390 | 1..439 | 320 | 24.9 | Plus |
CG18744-PB | 410 | CG18744-PB | 1..318 | 1..309 | 279 | 28.7 | Plus |
Vdup1-PE | 342 | CG7047-PE | 9..298 | 6..310 | 240 | 25.8 | Plus |
Vdup1-PD | 342 | CG7047-PD | 9..298 | 6..310 | 240 | 25.8 | Plus |
Vdup1-PA | 342 | CG7047-PA | 9..298 | 6..310 | 240 | 25.8 | Plus |
Vdup1-PC | 342 | CG7047-PC | 9..298 | 6..310 | 240 | 25.8 | Plus |
Vdup1-PB | 342 | CG7047-PB | 9..298 | 6..310 | 240 | 25.8 | Plus |
CG3014-PC | 488 | CG3014-PC | 1..297 | 1..311 | 213 | 21.9 | Plus |
CG3014-PA | 488 | CG3014-PA | 1..297 | 1..311 | 213 | 21.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24129-PA | 464 | GI24129-PA | 1..464 | 1..469 | 1761 | 73.5 | Plus |
Dmoj\GI23467-PA | 430 | GI23467-PA | 1..419 | 1..435 | 656 | 35.2 | Plus |
Dmoj\GI23468-PA | 405 | GI23468-PA | 1..392 | 1..437 | 553 | 31.7 | Plus |
Dmoj\GI23466-PA | 427 | GI23466-PA | 1..305 | 1..311 | 521 | 36.4 | Plus |
Dmoj\GI23546-PA | 409 | GI23546-PA | 4..405 | 3..432 | 449 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12155-PA | 435 | GL12155-PA | 1..408 | 1..435 | 656 | 34.1 | Plus |
Dper\GL12153-PA | 403 | GL12153-PA | 4..306 | 5..311 | 558 | 35.6 | Plus |
Dper\GL12154-PA | 435 | GL12154-PA | 1..406 | 1..428 | 505 | 31.1 | Plus |
Dper\GL22035-PA | 420 | GL22035-PA | 4..419 | 3..435 | 449 | 26.7 | Plus |
Dper\GL12456-PA | 108 | GL12456-PA | 1..107 | 346..451 | 424 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10062-PA | 466 | GA10062-PA | 1..466 | 1..469 | 2125 | 85.1 | Plus |
Dpse\GA15063-PA | 435 | GA15063-PA | 1..408 | 1..435 | 662 | 34.4 | Plus |
Dpse\GA15064-PA | 431 | GA15064-PA | 4..306 | 5..311 | 558 | 35.6 | Plus |
Dpse\GA15065-PA | 407 | GA15065-PA | 1..390 | 1..435 | 550 | 33.6 | Plus |
Dpse\GA26206-PC | 435 | GA26206-PC | 1..406 | 1..428 | 515 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10973-PA | 469 | GM10973-PA | 1..469 | 1..469 | 2507 | 97.9 | Plus |
Dsec\GM10459-PA | 435 | GM10459-PA | 1..407 | 1..434 | 667 | 35 | Plus |
Dsec\GM10457-PA | 438 | GM10457-PA | 4..306 | 5..311 | 526 | 33.9 | Plus |
Dsec\GM10458-PA | 406 | GM10458-PA | 1..387 | 1..426 | 522 | 28.8 | Plus |
Dsec\GM10460-PA | 417 | GM10460-PA | 26..310 | 22..317 | 491 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19947-PA | 469 | GD19947-PA | 1..469 | 1..469 | 2506 | 98.1 | Plus |
Dsim\GD19463-PA | 435 | GD19463-PA | 1..407 | 1..434 | 668 | 35.3 | Plus |
Dsim\GD19461-PA | 438 | GD19461-PA | 4..407 | 5..426 | 532 | 30.2 | Plus |
Dsim\GD19464-PA | 417 | GD19464-PA | 26..310 | 22..317 | 476 | 35.1 | Plus |
Dsim\GD19457-PA | 511 | GD19457-PA | 1..312 | 1..321 | 386 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10952-PA | 464 | GJ10952-PA | 1..464 | 1..469 | 1903 | 74.3 | Plus |
Dvir\GJ10222-PA | 426 | GJ10222-PA | 1..403 | 1..432 | 610 | 34.4 | Plus |
Dvir\GJ10221-PA | 431 | GJ10221-PA | 1..305 | 1..311 | 538 | 36.7 | Plus |
Dvir\GJ10223-PA | 406 | GJ10223-PA | 1..312 | 1..321 | 536 | 33.6 | Plus |
Dvir\GJ24027-PA | 410 | GJ24027-PA | 4..410 | 3..436 | 415 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12019-PA | 469 | GK12019-PA | 1..469 | 1..469 | 1961 | 77.8 | Plus |
Dwil\GK11060-PA | 431 | GK11060-PA | 1..407 | 1..432 | 664 | 34.5 | Plus |
Dwil\GK11059-PA | 430 | GK11059-PA | 5..400 | 5..428 | 576 | 30.6 | Plus |
Dwil\GK11061-PA | 412 | GK11061-PA | 1..394 | 1..437 | 544 | 31.8 | Plus |
Dwil\GK10823-PA | 425 | GK10823-PA | 4..421 | 3..432 | 453 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24941-PA | 469 | GE24941-PA | 1..469 | 1..469 | 2489 | 97.4 | Plus |
Dyak\GE25773-PA | 435 | GE25773-PA | 1..407 | 1..434 | 670 | 35.7 | Plus |
Dyak\GE25774-PA | 413 | GE25774-PA | 1..386 | 1..389 | 555 | 33.5 | Plus |
Dyak\GE25771-PA | 438 | GE25771-PA | 4..306 | 5..311 | 530 | 34.2 | Plus |
Dyak\GE25772-PA | 388 | GE25772-PA | 1..371 | 22..428 | 488 | 29 | Plus |
Translation from 86 to 1495
> RE33762.hyp MSKNCMITFDQNEHGTYFTGQVITGKVIVNLNKTKKLRGIKLQISGYAQA QWRIRRHGKAVAIQNPKKRSKHQYSGREDYIASTTYLMGSEQGSNFNMDA GTYTYTFACPIPSHCPSSFEGAYGHIRYLAKVTFLKPGASNRTHNVGFTV LKLLDLNQETKMLREPASNEAVEHFCLMHTKPVQLKVTLQQQGYVPGQFM LIHAHVRNDSSSDCRKLLIMLHLRATYTADTPSLRTTSEKIMLVKRECGP VAHNAQRTYTETLRIPATAPTCEHLSKVVRVSYEVRVVAVMNWLMANPRL IIPVTIGNVPLATAVSGPDFLPTNAFPSGSSLPADLPCTSTRAMELAQMA ASGVSNSGYEMAEDLEDFELPEDGDDELEAADDFVPDLPPPTYEQAMFMT TDIADTDANTVSEASRFTPRYPVFDVDTFQSPPPNPPQKKRRRRRRRPAD PGQSKQQPEKQPVESPVQI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10086-PA | 469 | CG10086-PA | 1..469 | 1..469 | 2465 | 100 | Plus |
CG18745-PA | 433 | CG18745-PA | 1..405 | 1..434 | 659 | 33.9 | Plus |
CG18747-PB | 418 | CG18747-PB | 1..399 | 1..392 | 541 | 31 | Plus |
CG18746-PA | 438 | CG18746-PA | 4..306 | 5..311 | 521 | 33.9 | Plus |
CG18748-PC | 409 | CG18748-PC | 5..392 | 5..428 | 517 | 28.3 | Plus |