BDGP Sequence Production Resources |
Search the DGRC for RE34180
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 341 |
Well: | 80 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG13667-RA |
Protein status: | RE34180.pep: gold |
Sequenced Size: | 1855 |
Gene | Date | Evidence |
---|---|---|
CG13667 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13667 | 2008-04-29 | Release 5.5 accounting |
CG13667 | 2008-08-15 | Release 5.9 accounting |
CG13667 | 2008-12-18 | 5.12 accounting |
1855 bp (1855 high quality bases) assembled on 2004-12-16
GenBank Submission: BT021286
> RE34180.complete ATTCGAAAATTCTGAATTGTAGAAAATGCGGCTGTTAGTGCTCTACGGGA GTCAAACCGGCACCGCCCAGGATGTGGCGGAACAGATCTGGCGGGAGTCG CATCAACTGGGCTTCCAAGGACCCGTGCTGCCTTTCGACGAGTACGATAT GACCAAACTTATTGAGGAGCGCCTCGTGGTCTTTGTGGTGGCCACTACGG GTGACGGAGTGGAGCCGGATAACATGAAGCTGGCCTGGCGATTTCTCCTG AAGCGCAGCTTACCCGCCCAATCCTTGCAAGGCATGCAGTTCGCGTGCCT TGGACTCGGGGACTCCAGCTATCCGAAGTTTAACTATGCCGCCAAGAAAC TGAGCAAGAGACTACAGAATCTGGGAGCAAATAGCGTGTGTCCAGTGGGT CTGTGTGATGATCAGCATGACTACGGGCATTTGGGTGTATCCCTTAGCTG GACAAAGGATTTGTGGACAGCTCTGAAAGGCATCTCTGGTCTTGACGAAA GTAAACTTAGCAACAGCCACCAAACTACTGTAAAGTGGTCAGTAAAGGAG CTGCCTAAGGATTCCCAAATTGCTCCGATGGACAATCTGCTCTGGAGCCA AAAACAAACTGCCCACTCTTTCAAAATTCTGGATAACCAAAGAACAACGG CGGTGGATCACTTTCAGGATGTACGCTTCCTAAGGCTGCAGTGTCAGACT GAAGATCTTAGCTGGGAACCCGGCGATGTACTCGATGTTCAGCCGCAAAA CAGCGATGAAGCTGTCCAAACATTCTTCGACCTTATTCGCGAACACAGCC TGAACTTCGATGAGAGCACTATAGTGGAGGTATCCAGTGCACATCAGGAT ATGCCCCTTCCCATAGCCTATTCCAATCCCTTAAGCCTCCTCCAGGCCGC CAAATTCGTTTGGGACTTGAGTGCTAAGCCACGGCAACGTTTCCTCGAGG TACTAGCACAGAATTGCTGCGATGAAATGGAAAAGGAAAAGCTGCTCGAA TTCTCCTCCGCGGAGGGAATTGATGACTTAGTGGCTTATGTGAACAGGCC GCGTCGTAATCTTTTGGAGGTTCTGGAGGATTTCCGGCACGCCACCTCTA GCTTAACTCTGCAACAGCTCTTTGAGATGATGCCACTGATCCAGCCACGC AGTTTTTCCATTGCCTCGGATGTTTCCGCCTTAAGTTTGGACTTGCTGGT GGCCGTTGTGGAGTACAAAACCATAATGCATACTCCACGTCTGGGCTTAT GCTCCAACTGGCTGAAGACTTTGAAATCGGGTACTGAGTTGAGCGGAGTT GTCAAAAGAGGAACCATGGTCTGGCCAAAAGACTTAAGTATACCACTTAT AATGGTAGGACCTGGCACAGGCATCGCTCCATTCCGTAGCATTATCCAAA ACCGATTGTATGCTCAATCAAAAGGTGCCACAATTGGTCCCTTGGTTGTT TTCTTTGGCTGTCGGAACAAAGCTGCCGATTTCCACTTTGGAAATGACTT CTCCACCTGGACCGATGCGAAACAGGTAGAGGCCCATACTGCCTTCTCGA GGGATCAGGATCAGAAGGTCTATGTCCAGCATTTAATCGCCAAGAATGGT GCTCATCTGGCGAGGCTTATAAAAGACCTGAATGCCTATATCTACGTGGC TGGCAACTCCAATAATATGCCAAAGTCTGTCAAAGAGGCCTTTATCGAGA TACTAGATGGCGATGCCGATTACGTGGAACTAATGATAAAACAGCGACGA TATCAGGAGGAAACCTGGGCGTAACACCGTATTTATTTGCGTATAGTTCC TATTTGTACAGTTTTGGACGGAAATTATATATTTGCACACAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 8397521..8399360 | 1..1840 | 9005 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 8405515..8407355 | 1..1841 | 9205 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 8398615..8400455 | 1..1841 | 9205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 8397521..8399360 | 1..1840 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13667-RB | 1..1749 | 26..1774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13667-RB | 1..1749 | 26..1774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13667-RA | 1..1749 | 26..1774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13667-RB | 1..1749 | 26..1774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13667-RA | 1..1749 | 26..1774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13667-RA | 84..1923 | 1..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13667-RA | 84..1923 | 1..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13667-RA | 41..1880 | 1..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13667-RA | 84..1923 | 1..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13667-RA | 41..1880 | 1..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8405515..8407354 | 1..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8405515..8407354 | 1..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8405515..8407354 | 1..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 8398615..8400454 | 1..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8398615..8400454 | 1..1840 | 100 | Plus |
Translation from 25 to 1773
> RE34180.pep MRLLVLYGSQTGTAQDVAEQIWRESHQLGFQGPVLPFDEYDMTKLIEERL VVFVVATTGDGVEPDNMKLAWRFLLKRSLPAQSLQGMQFACLGLGDSSYP KFNYAAKKLSKRLQNLGANSVCPVGLCDDQHDYGHLGVSLSWTKDLWTAL KGISGLDESKLSNSHQTTVKWSVKELPKDSQIAPMDNLLWSQKQTAHSFK ILDNQRTTAVDHFQDVRFLRLQCQTEDLSWEPGDVLDVQPQNSDEAVQTF FDLIREHSLNFDESTIVEVSSAHQDMPLPIAYSNPLSLLQAAKFVWDLSA KPRQRFLEVLAQNCCDEMEKEKLLEFSSAEGIDDLVAYVNRPRRNLLEVL EDFRHATSSLTLQQLFEMMPLIQPRSFSIASDVSALSLDLLVAVVEYKTI MHTPRLGLCSNWLKTLKSGTELSGVVKRGTMVWPKDLSIPLIMVGPGTGI APFRSIIQNRLYAQSKGATIGPLVVFFGCRNKAADFHFGNDFSTWTDAKQ VEAHTAFSRDQDQKVYVQHLIAKNGAHLARLIKDLNAYIYVAGNSNNMPK SVKEAFIEILDGDADYVELMIKQRRYQEETWA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24397-PA | 582 | GF24397-PA | 1..582 | 1..582 | 2561 | 80.8 | Plus |
Dana\GF14516-PA | 678 | GF14516-PA | 83..678 | 3..582 | 619 | 28.5 | Plus |
Dana\GF14065-PA | 1356 | GF14065-PA | 814..1332 | 84..582 | 295 | 25.4 | Plus |
Dana\GF18497-PA | 466 | GF18497-PA | 88..465 | 217..581 | 176 | 21.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14311-PA | 582 | GG14311-PA | 1..582 | 1..582 | 2927 | 93.3 | Plus |
Dere\GG10405-PA | 679 | GG10405-PA | 84..679 | 3..582 | 620 | 28.2 | Plus |
Dere\GG10354-PA | 1341 | GG10354-PA | 661..1317 | 1..582 | 309 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15063-PA | 576 | GH15063-PA | 1..576 | 1..582 | 2182 | 68.4 | Plus |
Dgri\GH10739-PA | 683 | GH10739-PA | 87..683 | 3..582 | 607 | 28 | Plus |
Dgri\GH13337-PA | 1359 | GH13337-PA | 817..1335 | 84..582 | 313 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13667-PB | 582 | CG13667-PB | 1..582 | 1..582 | 3028 | 100 | Plus |
CG13667-PA | 582 | CG13667-PA | 1..582 | 1..582 | 3028 | 100 | Plus |
Cpr-PD | 679 | CG11567-PD | 84..679 | 3..582 | 602 | 28.5 | Plus |
Cpr-PC | 679 | CG11567-PC | 84..679 | 3..582 | 602 | 28.5 | Plus |
Cpr-PA | 679 | CG11567-PA | 84..679 | 3..582 | 602 | 28.5 | Plus |
Cpr-PB | 550 | CG11567-PB | 31..550 | 77..582 | 499 | 27.5 | Plus |
Nos-PK | 1098 | CG6713-PK | 418..1029 | 1..544 | 300 | 24.8 | Plus |
Nos-PA | 1349 | CG6713-PA | 669..1280 | 1..544 | 300 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12831-PA | 578 | GI12831-PA | 1..578 | 1..582 | 2270 | 70.9 | Plus |
Dmoj\GI11531-PA | 682 | GI11531-PA | 87..682 | 3..582 | 637 | 28.7 | Plus |
Dmoj\GI17812-PA | 1367 | GI17812-PA | 825..1343 | 84..582 | 315 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24703-PA | 583 | GL24703-PA | 1..583 | 1..582 | 2467 | 77.4 | Plus |
Dper\GL25521-PA | 679 | GL25521-PA | 84..679 | 3..582 | 626 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23957-PA | 340 | GA23957-PA | 1..247 | 1..246 | 1031 | 77.3 | Plus |
Dpse\GA11069-PA | 679 | GA11069-PA | 84..679 | 3..582 | 626 | 28.5 | Plus |
Dpse\GA23957-PA | 340 | GA23957-PA | 249..340 | 491..582 | 388 | 77.2 | Plus |
Dpse\GA19805-PA | 1348 | GA19805-PA | 806..1279 | 84..544 | 281 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25053-PA | 582 | GM25053-PA | 1..582 | 1..582 | 3056 | 97.4 | Plus |
Dsec\GM18621-PA | 679 | GM18621-PA | 84..679 | 3..582 | 623 | 28.3 | Plus |
Dsec\GM11413-PA | 1382 | GM11413-PA | 840..1358 | 84..582 | 308 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14092-PA | 521 | GD14092-PA | 1..521 | 1..582 | 2419 | 81.8 | Plus |
Dsim\GD23403-PA | 679 | GD23403-PA | 84..679 | 3..582 | 613 | 28.2 | Plus |
Dsim\GD22223-PA | 1130 | GD22223-PA | 739..1106 | 231..582 | 282 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12973-PA | 577 | GJ12973-PA | 1..577 | 1..582 | 2172 | 69.2 | Plus |
Dvir\GJ12806-PA | 685 | GJ12806-PA | 89..685 | 3..582 | 620 | 28.7 | Plus |
Dvir\GJ17639-PA | 1370 | GJ17639-PA | 828..1346 | 84..582 | 321 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10860-PA | 584 | GK10860-PA | 1..584 | 1..582 | 1950 | 61.7 | Plus |
Dwil\GK14755-PA | 681 | GK14755-PA | 85..681 | 3..582 | 615 | 28.1 | Plus |
Dwil\GK23979-PA | 1356 | GK23979-PA | 674..1332 | 1..582 | 305 | 24.2 | Plus |
Dwil\GK13220-PA | 461 | GK13220-PA | 101..460 | 228..581 | 179 | 22.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20740-PA | 582 | GE20740-PA | 1..582 | 1..582 | 2929 | 92.8 | Plus |
Dyak\GE13802-PA | 679 | GE13802-PA | 84..679 | 3..582 | 622 | 28.2 | Plus |
Dyak\GE13295-PA | 1347 | GE13295-PA | 667..1323 | 1..582 | 320 | 25 | Plus |
Translation from 25 to 1773
> RE34180.hyp MRLLVLYGSQTGTAQDVAEQIWRESHQLGFQGPVLPFDEYDMTKLIEERL VVFVVATTGDGVEPDNMKLAWRFLLKRSLPAQSLQGMQFACLGLGDSSYP KFNYAAKKLSKRLQNLGANSVCPVGLCDDQHDYGHLGVSLSWTKDLWTAL KGISGLDESKLSNSHQTTVKWSVKELPKDSQIAPMDNLLWSQKQTAHSFK ILDNQRTTAVDHFQDVRFLRLQCQTEDLSWEPGDVLDVQPQNSDEAVQTF FDLIREHSLNFDESTIVEVSSAHQDMPLPIAYSNPLSLLQAAKFVWDLSA KPRQRFLEVLAQNCCDEMEKEKLLEFSSAEGIDDLVAYVNRPRRNLLEVL EDFRHATSSLTLQQLFEMMPLIQPRSFSIASDVSALSLDLLVAVVEYKTI MHTPRLGLCSNWLKTLKSGTELSGVVKRGTMVWPKDLSIPLIMVGPGTGI APFRSIIQNRLYAQSKGATIGPLVVFFGCRNKAADFHFGNDFSTWTDAKQ VEAHTAFSRDQDQKVYVQHLIAKNGAHLARLIKDLNAYIYVAGNSNNMPK SVKEAFIEILDGDADYVELMIKQRRYQEETWA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13667-PB | 582 | CG13667-PB | 1..582 | 1..582 | 3028 | 100 | Plus |
CG13667-PA | 582 | CG13667-PA | 1..582 | 1..582 | 3028 | 100 | Plus |
Cpr-PD | 679 | CG11567-PD | 84..679 | 3..582 | 602 | 28.5 | Plus |
Cpr-PC | 679 | CG11567-PC | 84..679 | 3..582 | 602 | 28.5 | Plus |
Cpr-PA | 679 | CG11567-PA | 84..679 | 3..582 | 602 | 28.5 | Plus |