Clone RE34508 Report

Search the DGRC for RE34508

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:345
Well:8
Vector:pFlc-1
Associated Gene/Transcriptrdx-RB
Protein status:RE34508.pep: gold
Preliminary Size:1296
Sequenced Size:2997

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12537 2002-01-01 Sim4 clustering to Release 2
CG9924 2002-06-10 Blastp of sequenced clone
CG9924 2003-01-01 Sim4 clustering to Release 3
rdx 2008-04-29 Release 5.5 accounting
rdx 2008-08-15 Release 5.9 accounting
rdx 2008-12-18 5.12 accounting

Clone Sequence Records

RE34508.complete Sequence

2997 bp (2997 high quality bases) assembled on 2002-06-10

GenBank Submission: AY121682

> RE34508.complete
GTTCATGTGGGTGGTAGCGTGTGAGTGTGTGCCGCAGCATGGGAAGCGAG
TGATTCGCTGATTCGCCAAATTCGTCGTATTTACTTGGAAATTTGCAAAC
TAATAGCCAAGGGTCGCCGCCGAACGAGTGCAATCGAATTAGATGCAAAA
ATATCCGTTAATTAGGTGCATTGCGGCCGAAAACGTCATCGCCGCGAGTG
CGACAGTGTGCGTGTCCCCAGTGCGTGCGCTCTCGTGTGTGTGTGTATGT
GCGTGTGTGTGGCGCAGTTCACACAACTTGGCCTGGAAAAAGTGAAAGAG
TATTTTTTCGGCCATATTGTGTTGTCATAGCTGGAAAAAGTGCATTTCCC
GGCCATATGGAGATTCAGATCATATGCGAATAAATATTCGCTGAGCCAAA
GTTTACTCAGAATCCCCCCAATTTCGAGTAAATAGGGCGACTTATGTAAA
GCGGAGAACGAGAAACTATTTACATTTACAAAGAAATCTTGACTCGCTTG
GCTTTGGCTTGTAAATTACAGGAAGGAACAGCAGTAATAACTTAAACAAG
ATTGCCGGTGAACGAATGTCAGGCAAGCCAAACAGCTAGAGTCACCTCGA
ACCTGCACGCATCCAGTAGCACGATGGCGGTCAGCCGTGTACCATCGCCG
CCCTTGCCGGAAGTTAATACGCCAGTTGCCGAGAACTGGTGCTACACGCA
GGTCAAAGTGGTTAAATTTAGTTATATGTGGACCATAAATAACTTTAGTT
TTTGTCGGGAAGAAATGGGTGAGGTACTCAAATCGTCCACATTCTCAGCC
GGTGCTAATGACAAACTAAAATGGTGTTTACGGGTTAACCCCAAGGGTCT
CGACGAGGAGAGCAAGGATTACCTTTCTTTATATTTACTGTTAGTTTCGT
GTAATAAATCAGAAGTCAGAGCCAAGTTCAAATTTTCCATACTGAATGCG
AAGCGTGAGGAAACCAAAGCAATGGAATCCCAAAGAGCTTATCGTTTTGT
GCAGGGCAAAGATTGGGGCTTCAAGAAGTTCATCCGACGAGACTTCCTGC
TGGACGAGGCCAACGGCCTGCTGCCGGAGGATAAGCTGACCATCTTCTGC
GAGGTCAGCGTCGTGGCGGACAGCGTGAACATCTCCGGACAATCCAATAT
CGTGCAGTTCAAAGTGCCCGAATGCAAGCTGTCCGAGGATCTTGGCAATC
TATTTGACAACGAGAAGTTCAGCGACGTCACGCTCTCCGTGGGCGGTCGA
GAGTTCCAGGCGCACAAGGCCATATTGGCAGCGCGCAGCGATGTCTTTGC
GGCCATGTTCGAGCATGAGATGGAGGAGCGAAAGTTGAATCGTGTCGCCA
TAACCGATGTGGATCATGAGGTTCTTAAAGAAATGCTGCGATTCATATAC
ACGGGCAAGGCGCCCAATCTAGAAAAAATGGCTGATGATCTCCTAGCGGC
TGCTGATAAGTATGCACTCGAAAAGCTGAAAGTGATGTGCGAGGAGGCGC
TGTGCGTCAATCTCTCTGTAGAAACAGCAGCCGAAACCCTAATATTAGCT
GATCTCCACAGTGCGGATCAATTGAAAGCACAAACGATAGATTTCATAAA
TACTCATGCCACCGATGTGATGGAAACCTCCGGCTGGCAAAATATGATCA
CAACACATTCACATTTGATAGCGGAGGCATTTCGTGCGCTCGCAACACAA
CAAATCCCACCAATTGGACCACCAAGGAAACGCGTGAAAATGAGCTGAAA
CAACAATGCAACAACTACAAACACACCAACAACAATAATAATAATAATAA
CAACAACAACAACAAGAGCAACTACAATAACAACAGCAGCAACAATTCGT
ACACCAACAACAATCAACAATCAACAGCAAGAACAACCAGAACAACAACA
AGTAACCCAAACTACTACAACCAACAATCGATTCAACAATCGCAACAGAA
AGCAGAACTCCAGTCGATGCAGTGGCCGCCATGTGAGATATCTGATGGAT
CGATTGGCGGAGAACCTCAAGAATGCATACGGCGGCAATACTACAAACGC
AATAGATTATGTTAAACGCAGACAGATAATGCAAATGCAGGAGCAAAAGC
ATAGCGAGCCGTACCGTTTATTGTTTCGATTTCAAGTAATTTAATTCACT
TTGATAAACTTGATTTTAAATGTATTTTATTTGTTGATTTAATATTACCT
TATGATTAATATGTTTACGAGTAATAATTATGAATTAATTTTAATCTTAA
GTCAAAACACAACTTGAAACAAAAGCAGCAATTAAAGAAGAAACAACAAC
AACAAAAACAAAAAAACCTAAAAAATAATGCAAACAAAAAAAGAGCATAA
AAAACAAAACGGAAAGTAAAATAAATTAAATTTAAAGTAAAGTAAAAACT
AAAAGTAAAAATCGAAGGCATAAATACAAGCAGAAATAAAGAAATTCACT
GAGAAAGCGTAACTATTATTATTATTATTATTATGATTACTATTATTACT
ATTATAATTACCGATTACTGCGTATAATTACAAAGCGTACACTTTGATTG
TGATGTATATTCGATGAGTATGACTAATGAGTAACGAGTAAATGAGTAAT
GATACGGATATGATAATGAAGTTGATTTATATATTGTGTATATGTAAACT
CGGAAAAAATTTTCAGATTCAAGGTTTAATTGCACCCACCACCCACCAAA
ATCGAAGAACTCCCCCATGAAATTGAGGAGAATGTAAAAATTTATTGTTT
ACCCGAGTTCTAAACTTTAATTTACTTTTCATCGCTGAATTCATGCCTGA
ACTTTTGTTTTTCGATTCCCCTCGTCTTTTCTTAAGTATCTAAAAGTATC
TAAATTTCAATATCAGACGCCTGTTTCTCTTTGTTAAGCGCAAAATGTAA
TTAATTTGTTGTACAAAACTATAAAAACAAACAAACAAAGCATTGTCGAA
ATAAACGCAAGCAGTAGCAATTTGTGTATAACAAAAAAAAAAAAAAA

RE34508.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:49:58
Subject Length Description Subject Range Query Range Score Percent Strand
rdx.g 3834 rdx.g 10..2990 1..2981 14890 99.9 Plus
rdx-RB 3321 rdx-RB 49..3029 1..2981 14890 99.9 Plus
rdx.c 3282 rdx.c 10..2990 1..2981 14890 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:10:10
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 9792863..9794240 2981..1604 6890 100 Minus
chr3R 27901430 chr3R 9856484..9856966 483..1 2400 99.8 Minus
chr3R 27901430 chr3R 9794819..9795116 1281..984 1490 100 Minus
chr3R 27901430 chr3R 9794518..9794700 1460..1278 915 100 Minus
chr3R 27901430 chr3R 9795188..9795350 985..823 815 100 Minus
chr3R 27901430 chr3R 9795860..9796014 703..549 775 100 Minus
chr3R 27901430 chr3R 9794307..9794451 1603..1459 725 100 Minus
chr3R 27901430 chr3R 9795415..9795544 826..697 650 100 Minus
chr3R 27901430 chr3R 9851789..9851857 550..482 345 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:51:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:10:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13967953..13969330 2981..1604 6890 100 Minus
3R 32079331 3R 14031573..14032055 483..1 2400 99.8 Minus
3R 32079331 3R 13969909..13970206 1281..984 1490 100 Minus
3R 32079331 3R 13969608..13969790 1460..1278 915 100 Minus
3R 32079331 3R 13970278..13970440 985..823 815 100 Minus
3R 32079331 3R 13970950..13971104 703..549 775 100 Minus
3R 32079331 3R 13969397..13969541 1603..1459 725 100 Minus
3R 32079331 3R 13970505..13970634 826..697 650 100 Minus
3R 32079331 3R 14026878..14026946 550..482 345 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:22:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 13708784..13710161 2981..1604 6890 100 Minus
3R 31820162 3R 13772404..13772886 483..1 2400 99.7 Minus
3R 31820162 3R 13710740..13711037 1281..984 1490 100 Minus
3R 31820162 3R 13710439..13710621 1460..1278 915 100 Minus
3R 31820162 3R 13711109..13711271 985..823 815 100 Minus
3R 31820162 3R 13711781..13711935 703..549 775 100 Minus
3R 31820162 3R 13710228..13710372 1603..1459 725 100 Minus
3R 31820162 3R 13711336..13711465 826..697 650 100 Minus
3R 31820162 3R 13767709..13767777 550..482 345 100 Minus
Blast to na_te.dros performed 2019-03-16 13:10:08
Subject Length Description Subject Range Query Range Score Percent Strand
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 306..384 2198..2120 142 69.1 Minus
invader1 4032 invader1 INVADER 4032bp 2149..2196 1618..1665 132 75 Plus

RE34508.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:11:22 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 9794096..9794240 1604..1748 100 <- Minus
chr3R 9794307..9794449 1461..1603 100 <- Minus
chr3R 9794518..9794696 1282..1460 100 <- Minus
chr3R 9793578..9793942 1902..2266 100 == Minus
chr3R 9794819..9795114 986..1281 100 <- Minus
chr3R 9795188..9795349 824..985 100 <- Minus
chr3R 9795418..9795539 702..823 100 <- Minus
chr3R 9795862..9796012 551..701 100 <- Minus
chr3R 9851789..9851855 484..550 100 <- Minus
chr3R 9856484..9856966 1..483 94   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:08:58 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
rdx-RA 20..1221 547..1748 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:25:46 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
rdx-RA 20..1221 547..1748 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:51:05 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
rdx-RA 20..1221 547..1748 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:16:15 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
rdx-RA 20..1221 547..1748 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:09:58 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
rdx-RA 20..1221 547..1748 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:08:57 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
rdx-RB 1..2981 1..2982 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:25:46 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
rdx-RB 1..2981 1..2982 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:51:05 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
rdx-RF 530..2964 547..2982 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:16:15 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
rdx-RB 1..2981 1..2982 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:09:58 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
rdx-RF 530..2964 547..2982 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:11:22 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13970278..13970439 824..985 100 <- Minus
3R 13970508..13970629 702..823 100 <- Minus
3R 13970952..13971102 551..701 100 <- Minus
3R 14026878..14026944 484..550 100 <- Minus
3R 13967952..13969330 1604..2982 99 <- Minus
3R 13969397..13969539 1461..1603 100 <- Minus
3R 13969608..13969786 1282..1460 100 <- Minus
3R 13969909..13970204 986..1281 100 <- Minus
3R 14031573..14032055 1..483 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:11:22 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13970278..13970439 824..985 100 <- Minus
3R 13970508..13970629 702..823 100 <- Minus
3R 13970952..13971102 551..701 100 <- Minus
3R 14026878..14026944 484..550 100 <- Minus
3R 13967952..13969330 1604..2982 99 <- Minus
3R 13969397..13969539 1461..1603 100 <- Minus
3R 13969608..13969786 1282..1460 100 <- Minus
3R 13969909..13970204 986..1281 100 <- Minus
3R 14031573..14032055 1..483 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:11:22 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13970278..13970439 824..985 100 <- Minus
3R 13970508..13970629 702..823 100 <- Minus
3R 13970952..13971102 551..701 100 <- Minus
3R 14026878..14026944 484..550 100 <- Minus
3R 13967952..13969330 1604..2982 99 <- Minus
3R 13969397..13969539 1461..1603 100 <- Minus
3R 13969608..13969786 1282..1460 100 <- Minus
3R 13969909..13970204 986..1281 100 <- Minus
3R 14031573..14032055 1..483 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:51:05 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9793674..9795052 1604..2982 99 <- Minus
arm_3R 9795119..9795261 1461..1603 100 <- Minus
arm_3R 9795330..9795508 1282..1460 100 <- Minus
arm_3R 9795631..9795926 986..1281 100 <- Minus
arm_3R 9796000..9796161 824..985 100 <- Minus
arm_3R 9796230..9796351 702..823 100 <- Minus
arm_3R 9796674..9796824 551..701 100 <- Minus
arm_3R 9852600..9852666 484..550 100 <- Minus
arm_3R 9857295..9857777 1..483 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:49:30 Download gff for RE34508.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13711339..13711460 702..823 100 <- Minus
3R 13711783..13711933 551..701 100 <- Minus
3R 13767709..13767775 484..550 100 <- Minus
3R 13708783..13710161 1604..2982 99 <- Minus
3R 13710228..13710370 1461..1603 100 <- Minus
3R 13710439..13710617 1282..1460 100 <- Minus
3R 13710740..13711035 986..1281 100 <- Minus
3R 13711109..13711270 824..985 100 <- Minus
3R 13772404..13772886 1..483 99   Minus

RE34508.pep Sequence

Translation from 623 to 1747

> RE34508.pep
MAVSRVPSPPLPEVNTPVAENWCYTQVKVVKFSYMWTINNFSFCREEMGE
VLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNKSEVRA
KFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLL
PEDKLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFS
DVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEV
LKEMLRFIYTGKAPNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVE
TAAETLILADLHSADQLKAQTIDFINTHATDVMETSGWQNMITTHSHLIA
EAFRALATQQIPPIGPPRKRVKMS*

RE34508.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:57:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18796-PA 822 GF18796-PA 449..822 1..374 2073 100 Plus
Dana\GF15622-PA 635 GF15622-PA 76..221 185..328 198 32.9 Plus
Dana\GF24095-PA 668 GF24095-PA 96..250 180..335 184 34 Plus
Dana\GF13750-PA 707 GF13750-PA 62..196 190..324 167 28.9 Plus
Dana\GF20424-PA 744 GF20424-PA 47..198 185..334 161 27.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:57:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21588-PA 406 GG21588-PA 33..406 1..374 2013 100 Plus
Dere\GG10220-PA 630 GG10220-PA 71..216 185..328 194 32.2 Plus
Dere\GG15931-PA 623 GG15931-PA 53..207 180..335 180 33.3 Plus
Dere\GG20941-PA 715 GG20941-PA 62..196 190..324 167 28.9 Plus
Dere\GG18368-PA 751 GG18368-PA 46..204 185..341 157 26.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18432-PA 878 GH18432-PA 505..878 1..374 2073 99.7 Plus
Dgri\GH10638-PA 625 GH10638-PA 66..211 185..328 191 30.8 Plus
Dgri\GH17090-PA 624 GH17090-PA 54..208 180..335 180 33.3 Plus
Dgri\GH19736-PA 710 GH19736-PA 62..196 190..324 164 28.1 Plus
Dgri\GH17891-PA 734 GH17891-PA 42..193 185..334 151 28.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:46
Subject Length Description Subject Range Query Range Score Percent Strand
rdx-PF 406 CG12537-PF 33..406 1..374 1923 100 Plus
rdx-PE 829 CG12537-PE 456..829 1..374 1923 100 Plus
rdx-PB 374 CG12537-PB 1..374 1..374 1923 100 Plus
rdx-PA 406 CG12537-PA 33..406 1..374 1923 100 Plus
rdx-PC 403 CG12537-PC 30..403 1..374 1923 100 Plus
CG9426-PA 627 CG9426-PA 68..213 185..328 196 32.2 Plus
dbo-PB 620 CG6224-PB 53..207 180..335 180 33.3 Plus
dbo-PA 623 CG6224-PA 53..207 180..335 180 33.3 Plus
CG15097-PC 617 CG15097-PC 62..193 190..321 161 29.5 Plus
CG15097-PD 734 CG15097-PD 62..193 190..321 161 29.5 Plus
CG15097-PE 743 CG15097-PE 62..193 190..321 161 29.5 Plus
BTBD9-PB 722 CG1826-PB 31..181 185..333 154 28.3 Plus
BTBD9-PA 722 CG1826-PA 31..181 185..333 154 28.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10787-PA 902 GI10787-PA 529..902 1..374 2077 99.7 Plus
Dmoj\GI17317-PA 204 GI17317-PA 5..176 180..353 436 49.4 Plus
Dmoj\GI11445-PA 186 GI11445-PA 11..172 180..342 327 46.7 Plus
Dmoj\GI10727-PA 623 GI10727-PA 64..209 185..328 199 32.9 Plus
Dmoj\GI11691-PA 617 GI11691-PA 54..208 180..335 181 33.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:58:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23319-PA 406 GL23319-PA 33..406 1..374 2013 100 Plus
Dper\GL26698-PA 628 GL26698-PA 69..214 185..328 193 32.2 Plus
Dper\GL25213-PA 628 GL25213-PA 55..209 180..335 181 33.3 Plus
Dper\GL17831-PA 374 GL17831-PA 27..183 185..339 168 29.1 Plus
Dper\GL17906-PA 374 GL17906-PA 27..183 185..339 168 29.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:58:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22127-PA 906 GA22127-PA 533..906 1..374 2080 100 Plus
Dpse\GA22127-PC 406 GA22127-PC 33..406 1..374 2013 100 Plus
Dpse\GA22127-PB 374 GA22127-PB 1..374 1..374 2007 100 Plus
Dpse\GA21778-PA 628 GA21778-PA 69..214 185..328 193 32.2 Plus
Dpse\GA19454-PA 628 GA19454-PA 55..209 180..335 181 33.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:58:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25894-PA 406 GM25894-PA 33..406 1..374 2013 100 Plus
Dsec\GM25768-PA 626 GM25768-PA 67..212 185..328 193 32.2 Plus
Dsec\GM25560-PA 623 GM25560-PA 53..207 180..335 180 33.3 Plus
Dsec\GM19869-PA 715 GM19869-PA 62..196 190..324 168 28.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:58:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20464-PA 406 GD20464-PA 33..406 1..374 2013 100 Plus
Dsim\GD14575-PA 623 GD14575-PA 53..207 180..335 180 33.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:58:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14385-PA 836 GJ14385-PA 463..836 1..374 2062 99.5 Plus
Dvir\GJ12074-PA 287 GJ12074-PA 1..286 48..353 642 45.2 Plus
Dvir\GJ18276-PA 625 GJ18276-PA 66..211 185..328 198 32.9 Plus
Dvir\GJ11367-PA 624 GJ11367-PA 54..208 180..335 181 33.3 Plus
Dvir\GJ21999-PA 702 GJ21999-PA 62..196 190..324 167 28.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:58:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22480-PA 877 GK22480-PA 504..877 1..374 2080 100 Plus
Dwil\GK15571-PA 641 GK15571-PA 80..227 185..328 195 32.4 Plus
Dwil\GK15757-PA 679 GK15757-PA 82..236 180..335 181 33.3 Plus
Dwil\GK22423-PA 548 GK22423-PA 9..160 185..334 179 28.8 Plus
Dwil\GK20700-PA 713 GK20700-PA 62..196 190..324 166 28.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:58:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10070-PA 406 GE10070-PA 33..406 1..374 2013 100 Plus
Dyak\GE11820-PA 630 GE11820-PA 71..216 185..328 193 32.2 Plus
Dyak\GE22281-PA 623 GE22281-PA 53..207 180..335 180 33.3 Plus
Dyak\GE13880-PA 721 GE13880-PA 62..196 190..324 165 28.9 Plus
Dyak\GE17855-PA 759 GE17855-PA 46..204 185..341 156 26.2 Plus

RE34508.hyp Sequence

Translation from 623 to 1747

> RE34508.hyp
MAVSRVPSPPLPEVNTPVAENWCYTQVKVVKFSYMWTINNFSFCREEMGE
VLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNKSEVRA
KFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLL
PEDKLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFS
DVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEV
LKEMLRFIYTGKAPNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVE
TAAETLILADLHSADQLKAQTIDFINTHATDVMETSGWQNMITTHSHLIA
EAFRALATQQIPPIGPPRKRVKMS*

RE34508.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:55:56
Subject Length Description Subject Range Query Range Score Percent Strand
rdx-PB 374 CG12537-PB 1..374 1..374 1923 100 Plus
rdx-PC 403 CG12537-PC 30..403 1..374 1923 100 Plus
rdx-PF 406 CG12537-PF 33..406 1..374 1923 100 Plus
rdx-PA 406 CG12537-PA 33..406 1..374 1923 100 Plus
rdx-PE 829 CG12537-PE 456..829 1..374 1923 100 Plus