BDGP Sequence Production Resources |
Search the DGRC for RE34668
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 346 |
Well: | 68 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG15611-RB |
Protein status: | RE34668.pep: gold |
Preliminary Size: | 1742 |
Sequenced Size: | 1640 |
Gene | Date | Evidence |
---|---|---|
CG15611 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15611 | 2002-05-17 | Blastp of sequenced clone |
CG15611 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15611 | 2008-04-29 | Release 5.5 accounting |
CG15611 | 2008-08-15 | Release 5.9 accounting |
CG15611 | 2008-12-18 | 5.12 accounting |
1640 bp (1640 high quality bases) assembled on 2002-05-17
GenBank Submission: AY119130
> RE34668.complete AGTGGAGTTTCGCGTTTGATTCGCTACGGATCGGTATCGTAATACTGTTA CTGGCCATATATAGTACACGTTTTGCCATCGATATGCGTCGAATTCGGCG GTGGTTTAGTCTATAGTGAGCTGTGAAAAAAAACCAAATCAACCAATATG GAGTTGTCATTGTTCACATTAAATTTGTTCGATGTGGTCTCGGTGGTGCT CACATTTCTTGTGATATTTCTAGTGCAAATTCTTAACGTTTACTTGCATA TACTCGACGATAATGCCGATAATGGCAAATCGATCGATGTGGTGGACAAG GCACCAGCGAAAGAATGCCCGTTACTTGAGTCCCAGTCACCCAGTTCACC AATCGCCACCACTCTACCGAAATCCCAGGCATCGAGCAACGGCAAGTTGG AGAAGCAAATAAGTCTGCTGGACAGCGATAGCCACGAGGATGAGGACACA TTGTCCTTGGAAAATCTGTTTCCCTGCGATCAAACCGAGATCTATGCCTC CAAGAAGATCAGCTTCATAATCGACGAGCTCATCCAGACGGAGGTGAACT ATGTGAACAATCTGAAGAAGGGTATGCTAAACTATGGACAGCTGAAGGAT GTCGAGGATTTGCCAGAAGCCCTGAGTGGCGAAACGAAACAAAAGATGCT GCTGGGAAACATTAAGGAAATACTGGAGCTGCATGAGAAGGAGATACTGC CGCTCATGTTGCGCAATCAGCGGGATCTCAAAGGTCTATTCGATGAGTTT GCTGCTCACTTCGAGAAAAATAGCTTCTATTGCTATGTGAGCTTCACTAT GGGGAAGAAGTCTTCTATGCAACTGCGACAGGATAATCGGCTGTGGTTGC AGACATATCAAACCCAAATAAAAGACAAGCTGGGCATCGACAGCTTCCTA GTTCAGCCCATCCAAAGACTGACCAGATATCCATTGCTCCTGCAGCAGTT CATATCGGAATTCTACAAAAGTGGAATTAGTTGCAAGCCAGTGCTGACTG CAGTTTGCAAACTCGAGACGCGCATGCGACGCGCTCTGGATGTGGTCAAT CAGGCCGAGGAGATACCCAACATCGAGGAGCTCAACGAGTTGGACGTCCT GCAGCTGGGAAACTTCCGCCGTGCGACGGAATTCGACGCCCAGCACTTTC CCACCCGGAAAAAGTACCGCTCCAAGGTGTTCCTGTTCGATCGCTGTTTG GTGTGCACGGAGGTGCGAAAGAAGCGGCTGGCCTACCGGCAGCACTACAA CTGGGAGCACGTGGAGCTGCAGAGGCCACTGGACTCGGTCTCGTCCAATG CCAACAAGATCATTAACCTGCTAGTGAAACAGGAGGAGGGCGGATCTAGT GTCGGCTCCAAGCGGGAGGAGTACTCCTTTATGGCTGCGGAGGCGTCGGT GGTGAAGCAGTGGCTCCAGGCCACCCACAAGATCATCGAGATCGCACGCA ATGAGCACGCCAGGCGGAACACCTTTAGCCTGCCCATGGACCTGGTCCTC GGCGTGGTGCTGGCCATCTGGCTGATCTGGCAGTACTTGTAAATAGTTCC CACCTCAATGCAACAACCATGTCCACATGCCCATCTAGATCGTAGATATC TAAGAATAAAGCTAAGTTATTTCGTAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15611-RB | 1893 | CG15611-RB | 101..1725 | 1..1626 | 8075 | 99.8 | Plus |
CG15611-RA | 2044 | CG15611-RA | 663..1857 | 432..1626 | 5975 | 100 | Plus |
CG15611.a | 1651 | CG15611.a | 457..1651 | 432..1626 | 5975 | 100 | Plus |
CG15611-RA | 2044 | CG15611-RA | 101..531 | 1..432 | 2105 | 99.5 | Plus |
CG15611.a | 1651 | CG15611.a | 117..325 | 224..432 | 1045 | 100 | Plus |
CG15611.a | 1651 | CG15611.a | 2..116 | 1..115 | 560 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13001014..13001551 | 1088..1625 | 2600 | 98.9 | Plus |
chr2R | 21145070 | chr2R | 12996044..12996467 | 1..431 | 1965 | 98.1 | Plus |
chr2R | 21145070 | chr2R | 12997356..12997691 | 430..765 | 1680 | 100 | Plus |
chr2R | 21145070 | chr2R | 13000819..13000951 | 957..1089 | 665 | 100 | Plus |
chr2R | 21145070 | chr2R | 13000657..13000764 | 851..958 | 540 | 100 | Plus |
chr2R | 21145070 | chr2R | 13000507..13000595 | 764..852 | 445 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17113823..17114361 | 1088..1626 | 2695 | 100 | Plus |
2R | 25286936 | 2R | 17108847..17109276 | 1..431 | 2090 | 99.5 | Plus |
2R | 25286936 | 2R | 17110165..17110500 | 430..765 | 1680 | 100 | Plus |
2R | 25286936 | 2R | 17113628..17113760 | 957..1089 | 665 | 100 | Plus |
2R | 25286936 | 2R | 17113466..17113573 | 851..958 | 540 | 100 | Plus |
2R | 25286936 | 2R | 17113316..17113404 | 764..852 | 445 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17115022..17115560 | 1088..1626 | 2695 | 100 | Plus |
2R | 25260384 | 2R | 17110046..17110475 | 1..431 | 2100 | 99.5 | Plus |
2R | 25260384 | 2R | 17111364..17111699 | 430..765 | 1680 | 100 | Plus |
2R | 25260384 | 2R | 17114827..17114959 | 957..1089 | 665 | 100 | Plus |
2R | 25260384 | 2R | 17114665..17114772 | 851..958 | 540 | 100 | Plus |
2R | 25260384 | 2R | 17114515..17114603 | 764..852 | 445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12996044..12996467 | 1..431 | 98 | -> | Plus |
chr2R | 12997358..12997691 | 432..765 | 100 | -> | Plus |
chr2R | 13000509..13000595 | 766..852 | 100 | -> | Plus |
chr2R | 13000659..13000763 | 853..957 | 100 | -> | Plus |
chr2R | 13000820..13000951 | 958..1089 | 100 | -> | Plus |
chr2R | 13001016..13001551 | 1090..1625 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15611-RB | 1..1395 | 148..1542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15611-RB | 1..1395 | 148..1542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15611-RB | 1..1395 | 148..1542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15611-RB | 1..1395 | 148..1542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15611-RB | 1..1395 | 148..1542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15611-RB | 1..1624 | 1..1625 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15611-RB | 1..1624 | 1..1625 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15611-RB | 4..1627 | 1..1625 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15611-RB | 1..1624 | 1..1625 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15611-RB | 4..1627 | 1..1625 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17108847..17109276 | 1..431 | 99 | -> | Plus |
2R | 17110167..17110500 | 432..765 | 100 | -> | Plus |
2R | 17113318..17113404 | 766..852 | 100 | -> | Plus |
2R | 17113468..17113572 | 853..957 | 100 | -> | Plus |
2R | 17113629..17113760 | 958..1089 | 100 | -> | Plus |
2R | 17113825..17114360 | 1090..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17108847..17109276 | 1..431 | 99 | -> | Plus |
2R | 17110167..17110500 | 432..765 | 100 | -> | Plus |
2R | 17113318..17113404 | 766..852 | 100 | -> | Plus |
2R | 17113468..17113572 | 853..957 | 100 | -> | Plus |
2R | 17113629..17113760 | 958..1089 | 100 | -> | Plus |
2R | 17113825..17114360 | 1090..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17108847..17109276 | 1..431 | 99 | -> | Plus |
2R | 17110167..17110500 | 432..765 | 100 | -> | Plus |
2R | 17113318..17113404 | 766..852 | 100 | -> | Plus |
2R | 17113468..17113572 | 853..957 | 100 | -> | Plus |
2R | 17113629..17113760 | 958..1089 | 100 | -> | Plus |
2R | 17113825..17114360 | 1090..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13000823..13000909 | 766..852 | 100 | -> | Plus |
arm_2R | 13000973..13001077 | 853..957 | 100 | -> | Plus |
arm_2R | 13001134..13001265 | 958..1089 | 100 | -> | Plus |
arm_2R | 12996352..12996781 | 1..431 | 99 | -> | Plus |
arm_2R | 12997672..12998005 | 432..765 | 100 | -> | Plus |
arm_2R | 13001330..13001865 | 1090..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17110046..17110475 | 1..431 | 99 | -> | Plus |
2R | 17111366..17111699 | 432..765 | 100 | -> | Plus |
2R | 17114517..17114603 | 766..852 | 100 | -> | Plus |
2R | 17114667..17114771 | 853..957 | 100 | -> | Plus |
2R | 17114828..17114959 | 958..1089 | 100 | -> | Plus |
2R | 17115024..17115559 | 1090..1625 | 100 | Plus |
Translation from 147 to 1541
> RE34668.pep MELSLFTLNLFDVVSVVLTFLVIFLVQILNVYLHILDDNADNGKSIDVVD KAPAKECPLLESQSPSSPIATTLPKSQASSNGKLEKQISLLDSDSHEDED TLSLENLFPCDQTEIYASKKISFIIDELIQTEVNYVNNLKKGMLNYGQLK DVEDLPEALSGETKQKMLLGNIKEILELHEKEILPLMLRNQRDLKGLFDE FAAHFEKNSFYCYVSFTMGKKSSMQLRQDNRLWLQTYQTQIKDKLGIDSF LVQPIQRLTRYPLLLQQFISEFYKSGISCKPVLTAVCKLETRMRRALDVV NQAEEIPNIEELNELDVLQLGNFRRATEFDAQHFPTRKKYRSKVFLFDRC LVCTEVRKKRLAYRQHYNWEHVELQRPLDSVSSNANKIINLLVKQEEGGS SVGSKREEYSFMAAEASVVKQWLQATHKIIEIARNEHARRNTFSLPMDLV LGVVLAIWLIWQYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11439-PA | 515 | GF11439-PA | 1..515 | 1..464 | 1995 | 74.4 | Plus |
Dana\GF11438-PA | 683 | GF11438-PA | 327..574 | 124..372 | 554 | 44.8 | Plus |
Dana\GF10654-PA | 1850 | GF10654-PA | 1297..1536 | 119..358 | 201 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20662-PA | 508 | GG20662-PA | 1..508 | 1..464 | 2250 | 84.3 | Plus |
Dere\GG20661-PA | 585 | GG20661-PA | 222..476 | 117..372 | 559 | 44.7 | Plus |
Dere\GG14443-PA | 1898 | GG14443-PA | 1344..1583 | 119..358 | 198 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21011-PA | 513 | GH21011-PA | 1..513 | 5..464 | 1799 | 68.5 | Plus |
Dgri\GH21010-PA | 602 | GH21010-PA | 231..532 | 117..436 | 568 | 39.6 | Plus |
Dgri\GH14899-PA | 1957 | GH14899-PA | 1406..1645 | 119..358 | 195 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15611-PB | 464 | CG15611-PB | 1..464 | 1..464 | 2367 | 100 | Plus |
CG15611-PA | 508 | CG15611-PA | 1..508 | 1..464 | 2312 | 91.3 | Plus |
CG30456-PC | 443 | CG30456-PC | 80..334 | 117..372 | 555 | 44.4 | Plus |
CG30456-PD | 592 | CG30456-PD | 229..483 | 117..372 | 555 | 44.4 | Plus |
CG30456-PB | 682 | CG30456-PB | 319..573 | 117..372 | 555 | 44.4 | Plus |
Pura-PC | 872 | CG33275-PC | 316..555 | 119..358 | 207 | 28.2 | Plus |
Pura-PB | 1428 | CG33275-PB | 872..1111 | 119..358 | 207 | 28.2 | Plus |
Pura-PD | 1898 | CG33275-PD | 1342..1581 | 119..358 | 207 | 28.2 | Plus |
Pura-PA | 1904 | CG33275-PA | 1348..1587 | 119..358 | 207 | 28.2 | Plus |
trio-PC | 2263 | CG18214-PC | 1246..1521 | 88..365 | 161 | 26.7 | Plus |
trio-PA | 2263 | CG18214-PA | 1246..1521 | 88..365 | 161 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18604-PA | 504 | GI18604-PA | 1..504 | 5..464 | 1771 | 67.7 | Plus |
Dmoj\GI18603-PA | 579 | GI18603-PA | 216..470 | 117..372 | 563 | 44.4 | Plus |
Dmoj\GI21547-PA | 347 | GI21547-PA | 18..249 | 124..355 | 333 | 37.2 | Plus |
Dmoj\GI12875-PA | 888 | GI12875-PA | 329..568 | 119..358 | 194 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17235-PA | 508 | GL17235-PA | 4..508 | 8..464 | 1987 | 76.2 | Plus |
Dper\GL17234-PA | 576 | GL17234-PA | 213..514 | 117..436 | 562 | 39.3 | Plus |
Dper\GL26580-PA | 912 | GL26580-PA | 345..584 | 119..358 | 195 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13847-PB | 463 | GA13847-PB | 4..463 | 8..464 | 2032 | 83.4 | Plus |
Dpse\GA13847-PA | 498 | GA13847-PA | 4..498 | 8..464 | 1991 | 77.5 | Plus |
Dpse\GA15855-PD | 664 | GA15855-PD | 301..606 | 117..440 | 563 | 38.8 | Plus |
Dpse\GA15855-PB | 679 | GA15855-PB | 316..617 | 117..436 | 558 | 39.3 | Plus |
Dpse\GA23678-PA | 862 | GA23678-PA | 293..532 | 119..358 | 194 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21758-PA | 508 | GM21758-PA | 1..508 | 1..464 | 2364 | 89 | Plus |
Dsec\GM21757-PA | 593 | GM21757-PA | 230..484 | 117..372 | 562 | 44.7 | Plus |
Dsec\GM14862-PA | 1394 | GM14862-PA | 838..1077 | 119..358 | 199 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11249-PA | 508 | GD11249-PA | 1..508 | 1..464 | 2355 | 88.8 | Plus |
Dsim\GD11248-PA | 956 | GD11248-PA | 593..847 | 117..372 | 562 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21620-PA | 513 | GJ21620-PA | 1..513 | 5..464 | 1770 | 66.7 | Plus |
Dvir\GJ21619-PA | 671 | GJ21619-PA | 308..609 | 117..436 | 568 | 39.6 | Plus |
Dvir\GJ15693-PA | 347 | GJ15693-PA | 28..271 | 124..367 | 414 | 36.2 | Plus |
Dvir\GJ13016-PA | 1670 | GJ13016-PA | 1092..1331 | 119..358 | 195 | 28.5 | Plus |
Dvir\GJ12704-PA | 539 | GJ12704-PA | 188..479 | 78..375 | 174 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17871-PA | 520 | GK17871-PA | 1..520 | 5..464 | 1770 | 68 | Plus |
Dwil\GK17870-PA | 764 | GK17870-PA | 401..655 | 117..372 | 576 | 45.1 | Plus |
Dwil\GK17395-PA | 1990 | GK17395-PA | 1409..1648 | 119..358 | 188 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11647-PA | 508 | GE11647-PA | 1..508 | 1..464 | 2289 | 86 | Plus |
Dyak\GE11646-PA | 593 | GE11646-PA | 230..484 | 117..372 | 564 | 44.7 | Plus |
Dyak\GE21634-PA | 1902 | GE21634-PA | 1346..1585 | 119..358 | 198 | 29 | Plus |
Translation from 147 to 1541
> RE34668.hyp MELSLFTLNLFDVVSVVLTFLVIFLVQILNVYLHILDDNADNGKSIDVVD KAPAKECPLLESQSPSSPIATTLPKSQASSNGKLEKQISLLDSDSHEDED TLSLENLFPCDQTEIYASKKISFIIDELIQTEVNYVNNLKKGMLNYGQLK DVEDLPEALSGETKQKMLLGNIKEILELHEKEILPLMLRNQRDLKGLFDE FAAHFEKNSFYCYVSFTMGKKSSMQLRQDNRLWLQTYQTQIKDKLGIDSF LVQPIQRLTRYPLLLQQFISEFYKSGISCKPVLTAVCKLETRMRRALDVV NQAEEIPNIEELNELDVLQLGNFRRATEFDAQHFPTRKKYRSKVFLFDRC LVCTEVRKKRLAYRQHYNWEHVELQRPLDSVSSNANKIINLLVKQEEGGS SVGSKREEYSFMAAEASVVKQWLQATHKIIEIARNEHARRNTFSLPMDLV LGVVLAIWLIWQYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15611-PB | 464 | CG15611-PB | 1..464 | 1..464 | 2367 | 100 | Plus |
CG15611-PA | 508 | CG15611-PA | 1..508 | 1..464 | 2312 | 91.3 | Plus |
CG30456-PC | 443 | CG30456-PC | 80..334 | 117..372 | 555 | 44.4 | Plus |
CG30456-PD | 592 | CG30456-PD | 229..483 | 117..372 | 555 | 44.4 | Plus |
CG30456-PB | 682 | CG30456-PB | 319..573 | 117..372 | 555 | 44.4 | Plus |