BDGP Sequence Production Resources |
Search the DGRC for RE34983
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 349 |
Well: | 83 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG6597-RA |
Protein status: | RE34983.pep: gold |
Sequenced Size: | 1327 |
Gene | Date | Evidence |
---|---|---|
CG6597 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6597 | 2004-03-31 | Blastp of sequenced clone |
CG6597 | 2008-04-29 | Release 5.5 accounting |
CG6597 | 2008-08-15 | Release 5.9 accounting |
CG6597 | 2008-12-18 | 5.12 accounting |
1327 bp (1327 high quality bases) assembled on 2004-03-31
GenBank Submission: BT012470
> RE34983.complete ATACTATCGCGAGTGGCCAACCCAGCTCTAATTGACGCCAAGAAATTTTG ATTGATTTTGAAAAATATGATAACTACTTCGGAGCTAAAGTAAACTGGTC ATATTGGGAAACATTGCGCAAAACTCAAATCCGACGGACGGAACGGACTG ACTCTGGAAAACACATCACAATAAGTCATGCCACGGGGAAAACGCCGAGC TGCAGATACTATTAGCGACAACATGGATCATGGTCAACCGAAGAGGGCCC GAACCAGCTACACCAGCATACCCACACAACAGAGCAGCAGACGCCATATC AGATTGGAAGATGGCTTCAGTCAAAAGCGTTGCATGGCCTGGTTCCAGGA GTACACAACACCAGATGAACCGGAGACATTGGGTCCCGATGGCATGGAAA AATTCTGCGAGGATATCGGCGTGGAGCCCGAGAATATTGTGATGCTGGTG CTGGCCTACAAAATGGGCGCCACCCAGATGGGCTTCTTCAGCCAGCAGGA GTGGCTAAAGGGCCTCACAGAACTCGACTGCGATTCGGCAGCGAAAATGG TTGTGAAATTGGACTATCTGCGCAGCATACTCAACGATCCCAACTCCTTT AAAAGCATCTACAGATACGCCTACGACTTTGCCAAGGACTCGGACCAACG GTGTATGGATATACTCACTGCCAAAGCCATGCTTCAACTACTTTTGGGCA AACATTGGCCTCTGTATCCACAGTTCGCACAGTTTCTAGAGCAATCAAAG TACAAGGCGATCAACAAAGATCAGTGGTGTAATATTCTCGAGTTCTCGCG CACCATTAGCATTGATCTATCAAACTACGATATCGACGGAGCTTGGCCCG TCATGCTGGATGAGTTTGTTGAATGGCTGCGCCTGCAGCGGAGTCAGGTC ACCTCCACAACCGGATCTAGCTGAGAAAAGCTGTATCGAGTCGCCTATTT CTAGTTCAACTTTGGGAGCTCAGTGCGGAGAGGAGTTCGCGGAGACTGAG TCGGAGATGGGATGCGATGCGATGGGATGGGAATGCTGATAAGATAGATC GGCGAAAATTTAAGACATAACCGCAGGACACTCACTGACACCCACACCCA CACTCAGATCCACGATCAGATCCACCAGCCACTTCTTCGGCCTAAAACAC ACAAGCACACACTCACCCACACGGAAACACAAGGCATTTTGGAGAGACTG CGTACACTGGCAAAGCAACCAACTATGAAACTAAACTATTGATAATATAT TTAATGTAATAATTTATGTATTAACGACGACAACTAAGAACTAAAAAAAA AAAAATAAAAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6597-RA | 1735 | CG6597-RA | 88..1383 | 1..1296 | 6480 | 100 | Plus |
CG6597.a | 1939 | CG6597.a | 398..1626 | 68..1296 | 6145 | 100 | Plus |
CG6597-RB | 1959 | CG6597-RB | 411..1637 | 70..1296 | 6135 | 100 | Plus |
CG6597-RB | 1959 | CG6597-RB | 7..79 | 1..73 | 350 | 98.6 | Plus |
CG6597.a | 1939 | CG6597.a | 1..34 | 40..73 | 155 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 20297873..20298318 | 845..1296 | 2135 | 98.7 | Plus |
chr3L | 24539361 | chr3L | 20297219..20297474 | 382..637 | 1280 | 100 | Plus |
chr3L | 24539361 | chr3L | 20297533..20297743 | 635..845 | 1055 | 100 | Plus |
chr3L | 24539361 | chr3L | 20292298..20292470 | 118..290 | 865 | 100 | Plus |
chr3L | 24539361 | chr3L | 20296954..20297050 | 288..384 | 485 | 100 | Plus |
chr3L | 24539361 | chr3L | 20291559..20291631 | 1..73 | 350 | 98.6 | Plus |
chr3L | 24539361 | chr3L | 20292191..20292240 | 69..118 | 250 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 20308747..20309198 | 845..1296 | 2260 | 100 | Plus |
3L | 28110227 | 3L | 20308093..20308348 | 382..637 | 1280 | 100 | Plus |
3L | 28110227 | 3L | 20308407..20308617 | 635..845 | 1055 | 100 | Plus |
3L | 28110227 | 3L | 20303173..20303345 | 118..290 | 865 | 100 | Plus |
3L | 28110227 | 3L | 20307828..20307924 | 288..384 | 485 | 100 | Plus |
3L | 28110227 | 3L | 20302434..20302506 | 1..73 | 350 | 98.6 | Plus |
3L | 28110227 | 3L | 20303066..20303115 | 69..118 | 250 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 20301847..20302298 | 845..1296 | 2260 | 100 | Plus |
3L | 28103327 | 3L | 20301193..20301448 | 382..637 | 1280 | 100 | Plus |
3L | 28103327 | 3L | 20301507..20301717 | 635..845 | 1055 | 100 | Plus |
3L | 28103327 | 3L | 20296273..20296445 | 118..290 | 865 | 100 | Plus |
3L | 28103327 | 3L | 20300928..20301024 | 288..384 | 485 | 100 | Plus |
3L | 28103327 | 3L | 20295534..20295606 | 1..73 | 350 | 98.6 | Plus |
3L | 28103327 | 3L | 20296166..20296215 | 69..118 | 250 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20291559..20291627 | 1..69 | 100 | -> | Plus |
chr3L | 20292192..20292240 | 70..118 | 100 | -> | Plus |
chr3L | 20292299..20292470 | 119..290 | 100 | -> | Plus |
chr3L | 20296957..20297048 | 291..382 | 100 | -> | Plus |
chr3L | 20297220..20297473 | 383..636 | 100 | -> | Plus |
chr3L | 20297535..20297742 | 637..844 | 100 | -> | Plus |
chr3L | 20297873..20298314 | 845..1292 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6597-RB | 1..747 | 178..924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6597-RC | 1..747 | 178..924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6597-RA | 1..747 | 178..924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6597-RB | 1..747 | 178..924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6597-RA | 1..747 | 178..924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6597-RA | 1..1292 | 1..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6597-RA | 55..1346 | 1..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6597-RA | 4..1295 | 1..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6597-RA | 1..1292 | 1..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6597-RA | 4..1295 | 1..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20303174..20303345 | 119..290 | 100 | -> | Plus |
3L | 20307831..20307922 | 291..382 | 100 | -> | Plus |
3L | 20308094..20308347 | 383..636 | 100 | -> | Plus |
3L | 20308409..20308616 | 637..844 | 100 | -> | Plus |
3L | 20302434..20302502 | 1..69 | 100 | -> | Plus |
3L | 20303067..20303115 | 70..118 | 100 | -> | Plus |
3L | 20308747..20309194 | 845..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20303174..20303345 | 119..290 | 100 | -> | Plus |
3L | 20307831..20307922 | 291..382 | 100 | -> | Plus |
3L | 20308094..20308347 | 383..636 | 100 | -> | Plus |
3L | 20308409..20308616 | 637..844 | 100 | -> | Plus |
3L | 20302434..20302502 | 1..69 | 100 | -> | Plus |
3L | 20303067..20303115 | 70..118 | 100 | -> | Plus |
3L | 20308747..20309194 | 845..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20303174..20303345 | 119..290 | 100 | -> | Plus |
3L | 20307831..20307922 | 291..382 | 100 | -> | Plus |
3L | 20308094..20308347 | 383..636 | 100 | -> | Plus |
3L | 20308409..20308616 | 637..844 | 100 | -> | Plus |
3L | 20302434..20302502 | 1..69 | 100 | -> | Plus |
3L | 20303067..20303115 | 70..118 | 100 | -> | Plus |
3L | 20308747..20309194 | 845..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20295534..20295602 | 1..69 | 100 | -> | Plus |
arm_3L | 20296167..20296215 | 70..118 | 100 | -> | Plus |
arm_3L | 20296274..20296445 | 119..290 | 100 | -> | Plus |
arm_3L | 20300931..20301022 | 291..382 | 100 | -> | Plus |
arm_3L | 20301194..20301447 | 383..636 | 100 | -> | Plus |
arm_3L | 20301509..20301716 | 637..844 | 100 | -> | Plus |
arm_3L | 20301847..20302294 | 845..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20301194..20301447 | 383..636 | 100 | -> | Plus |
3L | 20301509..20301716 | 637..844 | 100 | -> | Plus |
3L | 20301847..20302294 | 845..1292 | 100 | Plus | |
3L | 20295534..20295602 | 1..69 | 100 | -> | Plus |
3L | 20296167..20296215 | 70..118 | 100 | -> | Plus |
3L | 20296274..20296445 | 119..290 | 100 | -> | Plus |
3L | 20300931..20301022 | 291..382 | 100 | -> | Plus |
Translation from 177 to 923
> RE34983.pep MPRGKRRAADTISDNMDHGQPKRARTSYTSIPTQQSSRRHIRLEDGFSQK RCMAWFQEYTTPDEPETLGPDGMEKFCEDIGVEPENIVMLVLAYKMGATQ MGFFSQQEWLKGLTELDCDSAAKMVVKLDYLRSILNDPNSFKSIYRYAYD FAKDSDQRCMDILTAKAMLQLLLGKHWPLYPQFAQFLEQSKYKAINKDQW CNILEFSRTISIDLSNYDIDGAWPVMLDEFVEWLRLQRSQVTSTTGSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10048-PA | 246 | GF10048-PA | 1..246 | 1..248 | 1226 | 93.1 | Plus |
Dana\GF24079-PA | 289 | GF24079-PA | 58..242 | 49..233 | 325 | 34.6 | Plus |
Dana\GF11995-PA | 332 | GF11995-PA | 119..307 | 56..246 | 259 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16098-PA | 248 | GG16098-PA | 1..248 | 1..248 | 1321 | 97.6 | Plus |
Dere\GG15909-PA | 288 | GG15909-PA | 58..242 | 49..233 | 335 | 35.7 | Plus |
Dere\GG22539-PA | 334 | GG22539-PA | 121..308 | 56..243 | 261 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14379-PA | 246 | GH14379-PA | 1..246 | 1..248 | 1181 | 88.7 | Plus |
Dgri\GH14742-PA | 282 | GH14742-PA | 58..242 | 49..233 | 316 | 34.1 | Plus |
Dgri\GH21603-PA | 338 | GH21603-PA | 125..303 | 56..233 | 265 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SCCRO4-PE | 248 | CG6597-PE | 1..248 | 1..248 | 1319 | 100 | Plus |
SCCRO4-PB | 248 | CG6597-PB | 1..248 | 1..248 | 1319 | 100 | Plus |
SCCRO4-PA | 248 | CG6597-PA | 1..248 | 1..248 | 1319 | 100 | Plus |
SCCRO4-PD | 213 | CG6597-PD | 2..213 | 37..248 | 1123 | 99.1 | Plus |
SCCRO-PE | 288 | CG7427-PE | 58..242 | 49..233 | 344 | 35.7 | Plus |
SCCRO-PA | 288 | CG7427-PA | 58..242 | 49..233 | 344 | 35.7 | Plus |
SCCRO-PD | 291 | CG7427-PD | 61..245 | 49..233 | 344 | 35.7 | Plus |
SCCRO-PB | 291 | CG7427-PB | 61..245 | 49..233 | 344 | 35.7 | Plus |
SCCRO-PC | 297 | CG7427-PC | 67..251 | 49..233 | 344 | 35.7 | Plus |
SCCRO3-PB | 334 | CG13322-PB | 121..299 | 56..233 | 259 | 32.6 | Plus |
SCCRO3-PC | 334 | CG13322-PC | 121..299 | 56..233 | 259 | 32.6 | Plus |
SCCRO3-PA | 334 | CG13322-PA | 121..299 | 56..233 | 259 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11322-PA | 246 | GI11322-PA | 1..246 | 1..248 | 1186 | 89.5 | Plus |
Dmoj\GI13120-PA | 281 | GI13120-PA | 58..254 | 49..245 | 327 | 33.5 | Plus |
Dmoj\GI19574-PA | 336 | GI19574-PA | 122..300 | 56..233 | 265 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25128-PA | 244 | GL25128-PA | 1..244 | 1..247 | 1127 | 85.4 | Plus |
Dper\GL24888-PA | 282 | GL24888-PA | 58..242 | 49..233 | 322 | 34.6 | Plus |
Dper\GL17317-PA | 336 | GL17317-PA | 115..301 | 48..233 | 266 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23691-PA | 244 | GA23691-PA | 1..244 | 1..247 | 1127 | 85.4 | Plus |
Dpse\GA20342-PA | 282 | GA20342-PA | 58..242 | 49..233 | 322 | 34.6 | Plus |
Dpse\GA12204-PA | 336 | GA12204-PA | 115..301 | 48..233 | 266 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22269-PA | 248 | GM22269-PA | 1..248 | 1..248 | 1331 | 98.8 | Plus |
Dsec\GM25539-PA | 239 | GM25539-PA | 9..193 | 49..233 | 334 | 35.7 | Plus |
Dsec\GM20324-PA | 334 | GM20324-PA | 121..309 | 56..246 | 274 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14870-PA | 248 | GD14870-PA | 1..248 | 1..248 | 1331 | 98.8 | Plus |
Dsim\GD14554-PA | 288 | GD14554-PA | 58..242 | 49..233 | 335 | 35.7 | Plus |
Dsim\GD25802-PA | 334 | GD25802-PA | 121..309 | 56..246 | 274 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11578-PA | 246 | GJ11578-PA | 1..246 | 1..248 | 1194 | 90.3 | Plus |
Dvir\GJ13867-PA | 281 | GJ13867-PA | 58..242 | 49..233 | 322 | 35.1 | Plus |
Dvir\GJ21150-PA | 340 | GJ21150-PA | 127..314 | 56..242 | 266 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16948-PA | 246 | GK16948-PA | 1..237 | 1..239 | 1168 | 91.2 | Plus |
Dwil\GK10601-PA | 272 | GK10601-PA | 58..242 | 49..233 | 317 | 34.1 | Plus |
Dwil\GK20876-PA | 373 | GK20876-PA | 131..318 | 56..242 | 264 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23063-PA | 248 | GE23063-PA | 1..248 | 1..248 | 1324 | 98 | Plus |
Dyak\GE22250-PA | 288 | GE22250-PA | 58..242 | 49..233 | 335 | 35.7 | Plus |
Dyak\GE13410-PA | 334 | GE13410-PA | 121..299 | 56..233 | 263 | 32 | Plus |
Translation from 177 to 923
> RE34983.hyp MPRGKRRAADTISDNMDHGQPKRARTSYTSIPTQQSSRRHIRLEDGFSQK RCMAWFQEYTTPDEPETLGPDGMEKFCEDIGVEPENIVMLVLAYKMGATQ MGFFSQQEWLKGLTELDCDSAAKMVVKLDYLRSILNDPNSFKSIYRYAYD FAKDSDQRCMDILTAKAMLQLLLGKHWPLYPQFAQFLEQSKYKAINKDQW CNILEFSRTISIDLSNYDIDGAWPVMLDEFVEWLRLQRSQVTSTTGSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6597-PE | 248 | CG6597-PE | 1..248 | 1..248 | 1319 | 100 | Plus |
CG6597-PB | 248 | CG6597-PB | 1..248 | 1..248 | 1319 | 100 | Plus |
CG6597-PA | 248 | CG6597-PA | 1..248 | 1..248 | 1319 | 100 | Plus |
CG6597-PD | 213 | CG6597-PD | 2..213 | 37..248 | 1123 | 99.1 | Plus |
CG7427-PE | 288 | CG7427-PE | 58..242 | 49..233 | 344 | 35.7 | Plus |