BDGP Sequence Production Resources |
Search the DGRC for RE35182
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 351 |
Well: | 82 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Osi24-RA |
Protein status: | RE35182.pep: gold |
Preliminary Size: | 1449 |
Sequenced Size: | 2641 |
Gene | Date | Evidence |
---|---|---|
CG15589 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15589 | 2002-05-17 | Blastp of sequenced clone |
CG15589 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15589 | 2008-04-29 | Release 5.5 accounting |
CG15589 | 2008-08-15 | Release 5.9 accounting |
CG15589 | 2008-12-18 | 5.12 accounting |
2641 bp (2641 high quality bases) assembled on 2002-05-17
GenBank Submission: AY119131
> RE35182.complete AGTCCAAATCTTCGCGAGCTGAAAGGCAGACGCAGACGCGCGAGTAAAGC GGGAATATAAGTTTGCGATCCCGAGCCTCTGATTATAATAACTGCCAGAA TACAGACTACAGTGGCGTGTGCTGCTCTAGTTCAAAGTGGGTATATTGTT TGCAGAGGCTAAAACTCCGATGCAGTGAATCTAAGTGTTGTTAAAGTGAA ACGAGCTGCAGCAATTGCATTGACAAAGGAAGTGAGCCAGTGAGTGAACG GGTTTCGGCCAGCATTTTCACCAAGCTAAATCGGAGAGCCGACGCGGAGC GGCAGTGAATGCAATTCCGATTTCGAAACATACAGAAACGAAAGTCTGCT GAAGAAAGTTCTCCGCTGCCGAATGCAAAAATTTAATTGCCAGCCAGCCG AGTGAACCAGAAACTCCTGCAGGAATTACAAGCTCCCCCGACTGCGAGAA GAAAACTGAACCGAATCGAGTCGAGTCGAAGCGAAGCGAGAACCTTGGCA TGCGAGTGCAGCTGCAAGGCGAAGGATAATGAAAATGGGTAGCCAGTACA TCGACGGGGCGAAATTAAAAGCAAACAGCCACAGAAAGCGGCGATGCAGT CCGCTGCTTTATGGAATTATCTTGCTCTGCAAAGTGGCGATGATACCGGC AGCTGTTCCGGAATCGGAATTGGATGCAGGAGCCCTCTATAGTCAGCCCC TCACTACGATGGCGGGACAGCCGCGCAACGATGACACATTCCGGCCCATC CTACCCATCGACATCAGTCCGGAGTTCATTTCGAGGAATGTATTCACAAA GTCGGGCCAGTACAGAGTGTTCCAGCCGGCGGAGAGCGAGAGTGATCTGC GCTTGGCGGTGGCCATGCGTCGACGGAACTTTAAACACCCCTCGGATTCA CCCAGAAAGCAGGAGTCCGAAAGTTCGGCAGCCGCTTTTAAAAACCAAAC CATTACCTCTATCGACGCCGAACTAAAAGGTCTGGAGGATCTGCTCGTGG ACTACGTGGAGCAGTTCTTCAGCAACGGCAGATATGAGCCCACTCCTGGT TTGGTCCTGGCTCTTCAGCAGAACCACTCGCACCCACAATCTTATACTGG CAAGCGCACCACCCGAAGCATTTTGGAGGACACCAACGTTGAGCTGAATG TTCCAAGGGCTTTTGAAAGCGCCCGACTGCTTTTCTTTAGCGGTTTGAAG AAGGTGATGTGGCCCATCTATATGGGTTTGCAAGTGCTGAAGAGCGTGCT CTTCGCCATGTTCCTGCCAACCATCATCAGCAGTGTAAGCCGACTGATTG GCAAGGGCATCACTTCCGGCTCGGCTGGGTCGGTGCCGTTGTTTATCCGC CCCATTGAGCCGCCACAAGAACTGGACTTCCGGGACAACAGCATGAATTT CGATGATGACAGCAAATTTTCCCTGGCGGACGAGGGCAAAACGCCAGCCG GCTACGAGTACAATGCAGAGGCATCACAGCAGCAGGCGCAATATGCCCAG GTCAATGGGAACTCGGTGAACCAGGCCACTTTGTCGCGCTATGGAGGTCA GCAGATGATGCAGGACACCTATCTGAGTGCTCTGCAGAGCATTGGCGCTG CCTCCTTCAAAAACTCCCAGAGCATGTCAGGATCCTTCAGCGCCGGAGCT GGTGGCGGAGCTCCAGGAATGACGAAGAAACCAACGCCGGCCGTGATGAA CACGTTCCAGAGCTTCCAGAAGGTGCCCAGCTCGTCGCTTTTGCTGTCCA ACTATGACCCCTTCTACAGTCCACTATTGTCCCGCCTGGACTCGGTGTTT GCCCAGCTCAAATTGAATCCGGAGAACGAAGCTTGCCGCGAGAAACTCAT CTGCCTGATGTACGCCAACCCCGCGAAGTATGCTCCGTACAGCAACCTGG TCTCAGCTCAACTCAGCAGGGAACTGAACGAGCTGCGGAAGCCTACTTCC GACAACCCGGACATCCTGCGATTCTTCAAGTACATGCGAGCGGCGAAGGA CGGTCAGGACGGCGTCGACTGCGACGAGTCCTTCGCCAAGTGCAAGGAGC TGAAGGACCTCGAGAACCCGGCAATGCTGTCCACCTACAACGACATCAAC AAACTGGTCCAGGCCCGCAAGCTGGCGTAGACGGGGTCTAAAGGTCTCGG AGCCATCTCTCGGACGGTATGGGGTCGAGATGACAGCAAAGTTCGTGGGA GTCACGTCAAAAGTCCGTCTGACGGATGCCTGCCTTCTGGGGATGGGCGG TGTAATTATGCAAATCGTACTTTAGATAGGATAGCCTAGCCATATATAGA GGTTCGTCAGACGGCAGCTGTCGGCGGCGGGTGGGGGTTGGTGCGCAGGG GCAGGGACGGGGCTTCATTAATACGCTGTAAATAGAAAAGTTTGTTTCGT AGTTTAATTAGCACCAGCACCAATTACTGGAGGATGCTGTTATTTTTAGC CATTTAGCTGAATTTTAAGTATTTATTTCTAGCCTACGACTATTTTTAAA CCTAACCCGACTATTTTTAACTATTTATTCTGTTGTTATTATGCGATTAG TCAGCGAGCATTGTTCAATGTCCTTAAATTATTCAACAAAATCATGTTGT ACCACCAGAAATAAACCAAACTTATTGAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 2030018..2030762 | 450..1194 | 3725 | 100 | Plus |
chr3R | 27901430 | chr3R | 2032621..2033330 | 1918..2627 | 3550 | 100 | Plus |
chr3R | 27901430 | chr3R | 2031532..2031988 | 1464..1920 | 2285 | 100 | Plus |
chr3R | 27901430 | chr3R | 2024465..2024915 | 1..451 | 2255 | 100 | Plus |
chr3R | 27901430 | chr3R | 2031309..2031471 | 1306..1468 | 815 | 100 | Plus |
chr3R | 27901430 | chr3R | 2031135..2031250 | 1192..1307 | 580 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 6204366..6205110 | 450..1194 | 3725 | 100 | Plus |
3R | 32079331 | 3R | 6206969..6207681 | 1918..2630 | 3565 | 100 | Plus |
3R | 32079331 | 3R | 6205880..6206336 | 1464..1920 | 2285 | 100 | Plus |
3R | 32079331 | 3R | 6198813..6199263 | 1..451 | 2255 | 100 | Plus |
3R | 32079331 | 3R | 6205657..6205819 | 1306..1468 | 815 | 100 | Plus |
3R | 32079331 | 3R | 6205483..6205598 | 1192..1307 | 580 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5945197..5945941 | 450..1194 | 3725 | 100 | Plus |
3R | 31820162 | 3R | 5947800..5948512 | 1918..2630 | 3565 | 100 | Plus |
3R | 31820162 | 3R | 5946711..5947167 | 1464..1920 | 2285 | 100 | Plus |
3R | 31820162 | 3R | 5939644..5940094 | 1..451 | 2255 | 100 | Plus |
3R | 31820162 | 3R | 5946488..5946650 | 1306..1468 | 815 | 100 | Plus |
3R | 31820162 | 3R | 5946314..5946429 | 1192..1307 | 580 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 2024465..2024915 | 1..451 | 100 | -> | Plus |
chr3R | 2030020..2030760 | 452..1192 | 100 | -> | Plus |
chr3R | 2031136..2031249 | 1193..1306 | 100 | -> | Plus |
chr3R | 2031310..2031471 | 1307..1468 | 100 | -> | Plus |
chr3R | 2031537..2031987 | 1469..1919 | 100 | -> | Plus |
chr3R | 2032623..2033330 | 1920..2627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15589-RA | 1..1602 | 529..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15589-RA | 1..1602 | 529..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi24-RA | 1..1602 | 529..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15589-RA | 1..1602 | 529..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi24-RA | 1..1602 | 529..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15589-RA | 1..2627 | 1..2627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15589-RA | 1..2627 | 1..2627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi24-RA | 3..2629 | 1..2627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15589-RA | 1..2627 | 1..2627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi24-RA | 3..2629 | 1..2627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6198813..6199263 | 1..451 | 100 | -> | Plus |
3R | 6204368..6205108 | 452..1192 | 100 | -> | Plus |
3R | 6205484..6205597 | 1193..1306 | 100 | -> | Plus |
3R | 6205658..6205819 | 1307..1468 | 100 | -> | Plus |
3R | 6205885..6206335 | 1469..1919 | 100 | -> | Plus |
3R | 6206971..6207678 | 1920..2627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6198813..6199263 | 1..451 | 100 | -> | Plus |
3R | 6204368..6205108 | 452..1192 | 100 | -> | Plus |
3R | 6205484..6205597 | 1193..1306 | 100 | -> | Plus |
3R | 6205658..6205819 | 1307..1468 | 100 | -> | Plus |
3R | 6205885..6206335 | 1469..1919 | 100 | -> | Plus |
3R | 6206971..6207678 | 1920..2627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6198813..6199263 | 1..451 | 100 | -> | Plus |
3R | 6204368..6205108 | 452..1192 | 100 | -> | Plus |
3R | 6205484..6205597 | 1193..1306 | 100 | -> | Plus |
3R | 6205658..6205819 | 1307..1468 | 100 | -> | Plus |
3R | 6205885..6206335 | 1469..1919 | 100 | -> | Plus |
3R | 6206971..6207678 | 1920..2627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 2031380..2031541 | 1307..1468 | 100 | -> | Plus |
arm_3R | 2024535..2024985 | 1..451 | 100 | -> | Plus |
arm_3R | 2030090..2030830 | 452..1192 | 100 | -> | Plus |
arm_3R | 2031206..2031319 | 1193..1306 | 100 | -> | Plus |
arm_3R | 2031607..2032057 | 1469..1919 | 100 | -> | Plus |
arm_3R | 2032693..2033400 | 1920..2627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5939644..5940094 | 1..451 | 100 | -> | Plus |
3R | 5945199..5945939 | 452..1192 | 100 | -> | Plus |
3R | 5946315..5946428 | 1193..1306 | 100 | -> | Plus |
3R | 5946489..5946650 | 1307..1468 | 100 | -> | Plus |
3R | 5946716..5947166 | 1469..1919 | 100 | -> | Plus |
3R | 5947802..5948509 | 1920..2627 | 100 | Plus |
Translation from 528 to 2129
> RE35182.pep MKMGSQYIDGAKLKANSHRKRRCSPLLYGIILLCKVAMIPAAVPESELDA GALYSQPLTTMAGQPRNDDTFRPILPIDISPEFISRNVFTKSGQYRVFQP AESESDLRLAVAMRRRNFKHPSDSPRKQESESSAAAFKNQTITSIDAELK GLEDLLVDYVEQFFSNGRYEPTPGLVLALQQNHSHPQSYTGKRTTRSILE DTNVELNVPRAFESARLLFFSGLKKVMWPIYMGLQVLKSVLFAMFLPTII SSVSRLIGKGITSGSAGSVPLFIRPIEPPQELDFRDNSMNFDDDSKFSLA DEGKTPAGYEYNAEASQQQAQYAQVNGNSVNQATLSRYGGQQMMQDTYLS ALQSIGAASFKNSQSMSGSFSAGAGGGAPGMTKKPTPAVMNTFQSFQKVP SSSLLLSNYDPFYSPLLSRLDSVFAQLKLNPENEACREKLICLMYANPAK YAPYSNLVSAQLSRELNELRKPTSDNPDILRFFKYMRAAKDGQDGVDCDE SFAKCKELKDLENPAMLSTYNDINKLVQARKLA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16374-PA | 540 | GF16374-PA | 1..540 | 1..533 | 2297 | 83.3 | Plus |
Dana\GF16390-PA | 768 | GF16390-PA | 668..763 | 408..505 | 270 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13130-PA | 532 | GG13130-PA | 1..532 | 1..533 | 2691 | 94.9 | Plus |
Dere\GG13280-PA | 739 | GG13280-PA | 639..734 | 408..505 | 264 | 43.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14017-PA | 497 | GH14017-PA | 1..497 | 61..533 | 1782 | 72 | Plus |
Dgri\GH14034-PA | 947 | GH14034-PA | 847..942 | 408..505 | 274 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Osi24-PA | 533 | CG15589-PA | 1..533 | 1..533 | 2724 | 100 | Plus |
Osi17-PB | 648 | CG15598-PB | 548..643 | 408..505 | 259 | 44.9 | Plus |
Osi17-PA | 648 | CG15598-PA | 548..643 | 408..505 | 259 | 44.9 | Plus |
Osi17-PD | 750 | CG15598-PD | 650..745 | 408..505 | 259 | 44.9 | Plus |
Osi17-PC | 750 | CG15598-PC | 650..745 | 408..505 | 259 | 44.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24390-PA | 510 | GI24390-PA | 1..510 | 61..533 | 1805 | 70.6 | Plus |
Dmoj\GI24407-PA | 702 | GI24407-PA | 602..697 | 408..505 | 259 | 43.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24053-PA | 473 | GL24053-PA | 1..473 | 61..533 | 2028 | 82.1 | Plus |
Dper\GL24071-PA | 741 | GL24071-PA | 641..736 | 408..505 | 270 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13830-PA | 537 | GA13830-PA | 14..536 | 11..532 | 2160 | 78.9 | Plus |
Dpse\GA26496-PC | 654 | GA26496-PC | 554..649 | 408..505 | 269 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10862-PA | 533 | GM10862-PA | 1..533 | 1..533 | 2780 | 97.6 | Plus |
Dsec\GM10881-PA | 647 | GM10881-PA | 547..642 | 408..505 | 268 | 44.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19844-PA | 533 | GD19844-PA | 1..533 | 1..533 | 2792 | 97.9 | Plus |
Dsim\GD19860-PA | 545 | GD19860-PA | 445..540 | 408..505 | 268 | 44.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14246-PA | 472 | GJ14246-PA | 1..472 | 61..533 | 1889 | 76.4 | Plus |
Dvir\GJ14266-PA | 705 | GJ14266-PA | 605..700 | 408..505 | 274 | 46.9 | Plus |
Translation from 528 to 2129
> RE35182.hyp MKMGSQYIDGAKLKANSHRKRRCSPLLYGIILLCKVAMIPAAVPESELDA GALYSQPLTTMAGQPRNDDTFRPILPIDISPEFISRNVFTKSGQYRVFQP AESESDLRLAVAMRRRNFKHPSDSPRKQESESSAAAFKNQTITSIDAELK GLEDLLVDYVEQFFSNGRYEPTPGLVLALQQNHSHPQSYTGKRTTRSILE DTNVELNVPRAFESARLLFFSGLKKVMWPIYMGLQVLKSVLFAMFLPTII SSVSRLIGKGITSGSAGSVPLFIRPIEPPQELDFRDNSMNFDDDSKFSLA DEGKTPAGYEYNAEASQQQAQYAQVNGNSVNQATLSRYGGQQMMQDTYLS ALQSIGAASFKNSQSMSGSFSAGAGGGAPGMTKKPTPAVMNTFQSFQKVP SSSLLLSNYDPFYSPLLSRLDSVFAQLKLNPENEACREKLICLMYANPAK YAPYSNLVSAQLSRELNELRKPTSDNPDILRFFKYMRAAKDGQDGVDCDE SFAKCKELKDLENPAMLSTYNDINKLVQARKLA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Osi24-PA | 533 | CG15589-PA | 1..533 | 1..533 | 2724 | 100 | Plus |
Osi17-PB | 648 | CG15598-PB | 548..643 | 408..505 | 259 | 44.9 | Plus |
Osi17-PA | 648 | CG15598-PA | 548..643 | 408..505 | 259 | 44.9 | Plus |
Osi17-PD | 750 | CG15598-PD | 650..745 | 408..505 | 259 | 44.9 | Plus |
Osi17-PC | 750 | CG15598-PC | 650..745 | 408..505 | 259 | 44.9 | Plus |