BDGP Sequence Production Resources |
Search the DGRC for RE35255
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 352 |
Well: | 55 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14646-RA |
Protein status: | RE35255.pep: gold |
Sequenced Size: | 1589 |
Gene | Date | Evidence |
---|---|---|
CG14646 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14646 | 2008-04-29 | Release 5.5 accounting |
CG14646 | 2008-08-15 | Release 5.9 accounting |
CG14646 | 2008-12-18 | 5.12 accounting |
1589 bp (1589 high quality bases) assembled on 2004-12-16
GenBank Submission: BT021284
> RE35255.complete TAGTGTTCGACGAAACCACTGAGCCAAACAAAATCCGAAATTATTCGCAA CATGGACGAGTCGGAGCTGCTATTCAATCTGTTTTATATTCTGTTGTGCA TGGTGATCATCTACCCGCCAGAGGAGTTCCAACGCCTGGGATTCACCATT GAACAGTTGTTCGCTCGGTTCCTGGGAGAAGAGTACCTGGACTTTGTAGG CTACCACCAGCGCCGTACTTCGCTGAATCTCTTCGTGCACTCCTGTCTGC CCTTCTCCTACTTTCTTATTCATAGGCTCAAGTTCTCCGTCTTCGCCACG CAGGAGCCCTTGGAGGACTTCGACCTGGACCCGGATTTCCCCATGCCCCA GGAAGCGGTAGCGTTTAAAACGCTTACGTGGAAAACCGCCCAGCGGTTCA GTGTGTTGGCCGTTCTGGCGATGCCCGCTCTGATCTTCAACTGGCACCAG GAAAACTGGCGTCGGCACCCGATCAGCAAGGCGCTCTCCAAGTACTCCAT CACGCCGGGCAGCTACAGTGCCGTGGCTAGCGAAATTGGTATAGAGTTCC GGCAACCGGAAATATACAAGAAGAAGCTAAATTCCATTAGCTCGGTGATT GCCACGCAGAACTGGATAATAAAAACCACCATGTACAATGTTCACTTCGC CCATCAGAGCAACACGTCGCTTAGCGTAGCTAAGGCAGAAACTTACAACA TATCGCATCAAGACCAAAACGACACCTTGCAGATGATAAGCATTATTGTA CGGCCAATGAGGCAGGGTGTGAGCGACTTCCACATACGAATTAATGCCCT GGAGTTTAGGAATCTAGAGAACCGAGTCCGACGACCAATCGCAATTCCCT CCAACATTCAGTTACACCGCAATGTTATAGACCGTTTTGTGGACGTCTTC AAGGCGCAAGTCGCCCAAAATCCCATTTTTCCAGATGATGCTACTACGGA AAAGTGTTTTGCCTGCATGCTAAACGAACCAAACACCAAGATCCACAAGC AGTGTGCCGACTTTGATCGCAATGGCGCTCCCTTGGCGAACGGGGCGTGC TGCTCAAACTGCTACTGCCGGCCCATGTGGTGTGTAGAGTGCCTAGCGCG CTGGTTTGCCGCTCGCCAAAGTGACGTGGATCGTGAGGTGTGGCTGGAGC AGAAGTGCACATGCCCAATGTGCCGAGCCAAGTTTTGTGTGCTTGATGTC AGCTACATCACAACCACAGTCGATGCAACTAACAGTACTCAGAGTCAAGG CACCGAAGAAGATACTAATGACACCACGTGATTTATGACTGTTAGAGATT AAAGGACTCTTAAATCGAACCTGGTTCTTTATTGGTCTTATTTAAGTGTA ATCATTTTCAATACAGTAAGACGTACAATTATATAGCTATAAACTTATAA ATATGCATAGTAATTAGTGCACTTATCACTTTTTAATACTTTAACAATCT AAGCAATCCTAATATTTTTATTTTACTTAAGTACAATTGATCTAAGCATA GACAGAAAGAGTGTTCATATGAGAAATATGCCTTAATATGCTCTGCATAG GAAACCTGTAGTGCAATAAGTCCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14646-RB | 1854 | CG14646-RB | 132..1705 | 1..1574 | 7870 | 100 | Plus |
CG14646-RA | 1854 | CG14646-RA | 132..1705 | 1..1574 | 7870 | 100 | Plus |
CG14646.b | 1626 | CG14646.b | 245..1515 | 304..1574 | 6355 | 100 | Plus |
CG14646.b | 1626 | CG14646.b | 1..245 | 1..245 | 1225 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CR41470-RA | 811 | CR41470-RA | 329..811 | 1574..1092 | 2415 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 216094..216777 | 1..684 | 100 | -> | Plus |
chr3R | 216830..217718 | 685..1573 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14646-RA | 1..1230 | 52..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14646-RB | 1..1230 | 52..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14646-RA | 1..1230 | 52..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14646-RA | 1..1230 | 52..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14646-RA | 1..1230 | 52..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CR41470-RA | 330..811 | 1092..1573 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14646-RA | 1..1573 | 1..1573 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14646-RA | 1..1573 | 1..1573 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14646-RA | 10..1582 | 1..1573 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14646-RA | 1..1573 | 1..1573 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14646-RA | 10..1582 | 1..1573 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4391111..4391999 | 685..1573 | 100 | Plus | |
3R | 4390375..4391058 | 1..684 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4391111..4391999 | 685..1573 | 100 | Plus | |
3R | 4390375..4391058 | 1..684 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4391111..4391999 | 685..1573 | 100 | Plus | |
3R | 4390375..4391058 | 1..684 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 216097..216780 | 1..684 | 100 | -> | Plus |
arm_3R | 216833..217721 | 685..1573 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4131206..4131889 | 1..684 | 100 | -> | Plus |
3R | 4131942..4132830 | 685..1573 | 100 | Plus |
Translation from 51 to 1280
> RE35255.pep MDESELLFNLFYILLCMVIIYPPEEFQRLGFTIEQLFARFLGEEYLDFVG YHQRRTSLNLFVHSCLPFSYFLIHRLKFSVFATQEPLEDFDLDPDFPMPQ EAVAFKTLTWKTAQRFSVLAVLAMPALIFNWHQENWRRHPISKALSKYSI TPGSYSAVASEIGIEFRQPEIYKKKLNSISSVIATQNWIIKTTMYNVHFA HQSNTSLSVAKAETYNISHQDQNDTLQMISIIVRPMRQGVSDFHIRINAL EFRNLENRVRRPIAIPSNIQLHRNVIDRFVDVFKAQVAQNPIFPDDATTE KCFACMLNEPNTKIHKQCADFDRNGAPLANGACCSNCYCRPMWCVECLAR WFAARQSDVDREVWLEQKCTCPMCRAKFCVLDVSYITTTVDATNSTQSQG TEEDTNDTT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18212-PA | 403 | GF18212-PA | 1..401 | 1..402 | 1867 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12373-PA | 409 | GG12373-PA | 1..409 | 1..409 | 2007 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14078-PA | 402 | GH14078-PA | 1..386 | 1..386 | 1766 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14646-PB | 409 | CG14646-PB | 1..409 | 1..409 | 2184 | 100 | Plus |
CG14646-PA | 409 | CG14646-PA | 1..409 | 1..409 | 2184 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10611-PA | 399 | GI10611-PA | 1..399 | 1..401 | 1739 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21463-PA | 401 | GL21463-PA | 1..386 | 1..386 | 1753 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13144-PA | 401 | GA13144-PA | 1..386 | 1..386 | 1757 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10752-PA | 409 | GM10752-PA | 1..409 | 1..409 | 2075 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19727-PA | 286 | GD19727-PA | 1..286 | 124..409 | 1487 | 95.1 | Plus |
Dsim\GD19726-PA | 105 | GD19726-PA | 1..104 | 1..104 | 534 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22965-PA | 400 | GJ22965-PA | 1..400 | 1..401 | 1776 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13531-PA | 407 | GK13531-PA | 1..404 | 1..402 | 1804 | 84.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25414-PA | 409 | GE25414-PA | 1..409 | 1..409 | 2023 | 93.6 | Plus |
Translation from 51 to 1280
> RE35255.hyp MDESELLFNLFYILLCMVIIYPPEEFQRLGFTIEQLFARFLGEEYLDFVG YHQRRTSLNLFVHSCLPFSYFLIHRLKFSVFATQEPLEDFDLDPDFPMPQ EAVAFKTLTWKTAQRFSVLAVLAMPALIFNWHQENWRRHPISKALSKYSI TPGSYSAVASEIGIEFRQPEIYKKKLNSISSVIATQNWIIKTTMYNVHFA HQSNTSLSVAKAETYNISHQDQNDTLQMISIIVRPMRQGVSDFHIRINAL EFRNLENRVRRPIAIPSNIQLHRNVIDRFVDVFKAQVAQNPIFPDDATTE KCFACMLNEPNTKIHKQCADFDRNGAPLANGACCSNCYCRPMWCVECLAR WFAARQSDVDREVWLEQKCTCPMCRAKFCVLDVSYITTTVDATNSTQSQG TEEDTNDTT*