BDGP Sequence Production Resources |
Search the DGRC for RE35371
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 353 |
Well: | 71 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14153-RA |
Protein status: | RE35371.pep: gold |
Preliminary Size: | 714 |
Sequenced Size: | 1034 |
Gene | Date | Evidence |
---|---|---|
CG14153 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14153 | 2002-02-22 | Blastp of sequenced clone |
CG14153 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14153 | 2008-04-29 | Release 5.5 accounting |
CG14153 | 2008-08-15 | Release 5.9 accounting |
CG14153 | 2008-12-18 | 5.12 accounting |
1034 bp (1034 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089620
> RE35371.complete ACGGTCAGAAATGAAGCCGCAAACAGGACGGATCGTGAAGAGCAGCTCGT CGAGCTGGCTATGTGCACTTATGCCCCTGATGATCGATGCAGTTTGTGGG AGAGCTCAGTATGCATCACCTTATGGCAGTGCTTATGCAATTACCACATC CAACTACGCTCAATCCAACTATGCCAATCCAGATGTACAATCGATATGGT CGGGTCCGCCTATCATAGTGAATGATAATCAGTACAGTGCCCAGGAACAG CAGCAGTATCCAAAAAGTAATGGTTATTATGTTGCGGAACCTGCGTATAG ACAAGCATATCCAAATTGGAGAAGGGAAGACCCAACACATGCTCCCAATC ACAACTATAACAATGTGCCCGGCTACTTTTACTATCAACAACAGGAGACT ACGCCATCAACACCTCTGCGCTATCCTCAATCTCAAATTCCACCTCAACT TCAGCCATATCCACAAAGGAATCCGGAATTGGAGACCAGCGATTCGGGTC GCGATGAGGAGCAAGTGGTCCAAATTGGCGGCAGTCGCTCATTGGCCACA AATAACTATCTAAATACGTACAATAATAAGGAGAATTTCTATGAACCCGC TCAGCCCTGGAGGCGTCGTGATTACCAGGCCAAATATGCCCAACATTTTG CCGAATATTTGCGTAAATATCCAAGACGCCTGCAGCCAGTTTACAACACC AACGAGGATTTTGTTGAAAAGTAGGGGAATACTCTGCATTTGACTTTGCA TCAAAAAACATATTGAATAAATCCCCTCAAGAGCCATTAGCAATTTTCGT TGAAAGCGTGCCAAGAAAACTATTTCTGTCTGTACTCGGAACAGATCAAT TGCATCCGATAAAGATACAGATTGCAGCTGCTGTAGAGTCAACATGCCAA CACAGTAAATATTGGTTTATCCCTTTAAAAGGCAAGAATAATAATAATTG TATGTAACAAAACTATGCTTAGTTAGTTCCGTAAGAGATACACAACAATA AAAGTTATTTTCAGAAGGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14153-RA | 1191 | CG14153-RA | 178..1191 | 4..1017 | 5070 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 10634922..10634979 | 1..58 | 96 | -> | Plus |
chr3L | 10635036..10635995 | 59..1018 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14153-RA | 1..714 | 11..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14153-RA | 1..714 | 11..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14153-RA | 1..714 | 11..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14153-RA | 1..714 | 11..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14153-RA | 1..714 | 11..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14153-RA | 1..1017 | 1..1017 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14153-RA | 1..1017 | 1..1017 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14153-RA | 6..1022 | 1..1017 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14153-RA | 1..1017 | 1..1017 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14153-RA | 6..1022 | 1..1017 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10643533..10643590 | 1..58 | 98 | -> | Plus |
3L | 10643657..10644615 | 59..1018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10643533..10643590 | 1..58 | 98 | -> | Plus |
3L | 10643657..10644615 | 59..1018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10643533..10643590 | 1..58 | 98 | -> | Plus |
3L | 10643657..10644615 | 59..1018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 10636633..10636690 | 1..58 | 98 | -> | Plus |
arm_3L | 10636757..10637715 | 59..1018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10636757..10637715 | 59..1018 | 99 | Plus | |
3L | 10636633..10636690 | 1..58 | 98 | -> | Plus |
Translation from 0 to 723
> RE35371.hyp QSEMKPQTGRIVKSSSSSWLCALMPLMIDAVCGRAQYASPYGSAYAITTS NYAQSNYANPDVQSIWSGPPIIVNDNQYSAQEQQQYPKSNGYYVAEPAYR QAYPNWRREDPTHAPNHNYNNVPGYFYYQQQETTPSTPLRYPQSQIPPQL QPYPQRNPELETSDSGRDEEQVVQIGGSRSLATNNYLNTYNNKENFYEPA QPWRRRDYQAKYAQHFAEYLRKYPRRLQPVYNTNEDFVEK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14153-PA | 237 | CG14153-PA | 1..237 | 4..240 | 1300 | 100 | Plus |
Translation from 10 to 723
> RE35371.pep MKPQTGRIVKSSSSSWLCALMPLMIDAVCGRAQYASPYGSAYAITTSNYA QSNYANPDVQSIWSGPPIIVNDNQYSAQEQQQYPKSNGYYVAEPAYRQAY PNWRREDPTHAPNHNYNNVPGYFYYQQQETTPSTPLRYPQSQIPPQLQPY PQRNPELETSDSGRDEEQVVQIGGSRSLATNNYLNTYNNKENFYEPAQPW RRRDYQAKYAQHFAEYLRKYPRRLQPVYNTNEDFVEK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10602-PA | 358 | GF10602-PA | 159..358 | 24..237 | 575 | 60.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15445-PA | 231 | GG15445-PA | 1..231 | 1..237 | 966 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14953-PA | 116 | GH14953-PA | 3..116 | 111..237 | 280 | 48.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14153-PA | 237 | CG14153-PA | 1..237 | 1..237 | 1300 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11480-PA | 224 | GI11480-PA | 48..224 | 59..237 | 198 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15476-PA | 296 | GL15476-PA | 25..296 | 17..237 | 467 | 47.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12791-PA | 304 | GA12791-PA | 25..304 | 17..237 | 471 | 47 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25220-PA | 236 | GM25220-PA | 1..236 | 1..237 | 1068 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14253-PA | 231 | GD14253-PA | 1..231 | 1..237 | 1030 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13674-PA | 242 | GJ13674-PA | 19..242 | 16..237 | 255 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21756-PA | 235 | GE21756-PA | 1..235 | 1..237 | 940 | 84.6 | Plus |