BDGP Sequence Production Resources |
Search the DGRC for RE36115
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 361 |
Well: | 15 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG15701-RA |
Protein status: | RE36115.pep: gold |
Preliminary Size: | 3156 |
Sequenced Size: | 3354 |
Gene | Date | Evidence |
---|---|---|
CG15701 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15701 | 2002-12-10 | Blastp of sequenced clone |
CG15701 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15701 | 2008-04-29 | Release 5.5 accounting |
CG15701 | 2008-08-15 | Release 5.9 accounting |
CG15701 | 2008-12-18 | 5.12 accounting |
3354 bp (3354 high quality bases) assembled on 2002-12-10
GenBank Submission: BT003203
> RE36115.complete AGGATTGATTAAATTTACGTGGCATACGGCATTTACTTCTATTAATTCGC AGCTTAATTAAGCACTTTAAACAGCATTTATTCCTTCTAAAATGTCAAAA AATGCGGGGCGAACCAGCAGCAAAAACGTCAAAACGGAAGTGCCAAGGAA GGTCACTAAATCACCAGCAACAAGTGGACCGGCCACCACAAGGGAATCGA AGGAGCGGAGGTCACTGGCCAAACAACCGGATAGCTTGGAAGGTGAAAAA ATTGCGAGGAAAACCACAACAGCAGCGCAACCTACGACCGCCAGCAAAAA GCCATTAGCCACGGGGAAAAACAAGGAAAGGGAGTCCTTGAGCAAGAGGA CCACTCCGTCCCCAGGTGCATTGCGTGCCACCACCAGACACACAACCACG ACCACAAACCCACCCCTGCAGTCCAAGACCACCAAGACCACGAAGCTCGT GGCCAAATCGAAGCCCAATGCAGTTCTGGACACGTATCACAGTGTTACGG TCGCCTCGCCACCGCAAAAGCGCAGAGGACAGGCGGAGCAGGAGAAGGAA TCGCCCACGCCTTCATCAAAAGAATATTCCCCTGTTGCACAGACTCAAAA GGAGCACAAGCCACAGTCTCCTTCCAAGGGAGATGCTCGTATTGTTCCGG CAAGATCCAGAACTTATACACGCACCTTGGATCCCGAGGAAGTGGTTATC CTTAAGCGTGAATCCGCCAAGCAAAGAAGCGAAGTGGAGGCCAAGGAATC AGAGCCTGTGAAACAGCCAGTGGCCTTTGAAGTCAAATTCGATGAAGCCA AAAAGCCAGAACCGGAATCCGATCACTACTCCGATGACTTCGAATCCTAT GAATCGGATTTCGAAACCGATGCCAGCACGCCCGACGAGGTGGAATCCGA TGAAGCGCAGGAGCCCTCATCCTCCGAGGCGGAAGTGGAGGAGGAGCGGG AGGAAGAGGATTCGGAGCCCACCCAAAATCCCATCACTGTGATCCAACGC GACAAGGATCAAGAGCGGAAATTGGACTCCGGTCATTATGACATGCATTT GCGCAGGAATCCCTTGAGCAGTCTGTCCACGCAGAATCAGTATGATAGCT TTGATACCAACTCGATGGCCAACTCAGAGCAACTGGACTCGGGCATTAGC ACCACTGGCGTGGAGAAGCCCCGGAGTGGAGAGGCTAACGTGTACTATGG TGGCTACTCGGGATTCGTTTCCCATCCCGTGATCAGTCGTCGCGGCGAAG AGCTAATGGCCAAATTGCGTTTCGATCAACTGAACTACCACCTGTTCGAG ATGAAGCCCCTCAGCTACGAGGGATTCATGCAGAGCTATGGGAAGCTGAA TGCCAGTCAAGTGGCCACACAGACGCAGTCACCACACATGGACGGCGAGT GCCAGACGCTGGAGGTGCACAGTCGTAGCAGCTGGACCCAACATCCACCC CACTATGGTGGGCAATTCGTTCTCAGCTGCAGTGTCGATGCGGAGTTGGA TGAAACATGGAGCAAGCAACCTGCAGATGAATACGAAGCTAGCATTTCTC GATTGGAGCAACTGCATCGCCTGGAGCAGGCACGCTCCCAGCAACTGCAG CAAAAGAGATTGGCCAAGAGCACGGATCTGGAGCGACTGAATTCGTTTCT TCACAGGGCCGGCAGACTTATGGGACTGGTTTTGGAGGGCAAAACCACGG CCCACGGCCAGGGGAATAGTCCTCGAAATGTACCACTTCAGACGGGACTG CTGAACGCACTGCCTGTGCGTCGAATCTTTGGAAGTGCCGGAAATGGACA ACTGGTGGTCACCGTGCACGAGTGTCCTGCGGACAGCAATGTATATAAGG AGGACTTTGCCAGCCTTCTGATGGTGTGGTCACTGGCCAATCCCAGCCAG CCGTTGCGCCTGCTCTCCACCTGGGCGGAAGTCAGCCGTGTGGCACTATC TGCGCAGGCCCAGGATATCGTGGTGGCCGGACTGAGAGATGGTAGTGTGG CTATGTGGGATTTGCGCGAGACGCACAGCTACTGCTCCAAGTTGGATGGC CACCTAACCCATTTTGCAGCCACACAATCGGTGGTTCCCATGCCGGAGCA ACAGGACAAGGAGGTAAATGCCATGGATCTGGGCGCTGTGGTGGATGTGC GCAGCTTTAGATCACACTTGAATGCTGGAGGAGTAGCTGCGACTAGTGGT TTGCAGACGACGTACAAGGAAGTTCAGTACGCCTCGCTGAATGACTCCGG CCTGCTGACCATGTGGACCCTGGTGGAGGGCGCCTCGTCCACCAACAGCA ACGAGTTCAGTTCGCCGTGGGCGCGTGTGAAGCTACTGCAGAGTGGCAGC TGTGATCTGAGGAGCTATCTGGAGCGACGCCTCCTGAAGAGCCATCAGAG TGCGTACGAGAAGACCAAGTCCCTGTTCCAGGGCAACATCTACAGCGATG ATGTGCTGCGTGAGCTGAATGACACGCAAACGCTGACCACGGCACTCCAG GGACAGGGATTGCAGGGCCTGCGCTTCACCAGCATCGATACGGGCAGTGA GCTCATCTATGTGTGCACCAACCGAAACTTTGTGCTCTGCTGCACGCGTA GTTTGAAGACGGAACGCTTCGCGAGGATCGCCGTGAACGAAAGTCGTTTC CTGTTTCCCACCTCGTTGTGTGTGCTCTCCAATGAGAACTATGTGGCCGT GGGTCTGTCCAATGGATCTGTGATGATACTCAACTGCAATCAGCGACAGA GGCAGCGCCAGAGGAATCAGCAGAGACCCAAAACAGGACTTCCGCCGGCC ACGGATGAGCCCGATCCCGAGACGGGCAAATCGTGTGCCATTCAAAACAT CATACTCAACGAGCGTAGATCATTTGACCAGCAGATGGATGACAATCCCA CGTACGATGCCCGACCCAACACAGCTCTGGAGCTGATTGAGCGACCCAGG CGTTCCTACGAAATGAGGGTCTTTGACCAGCAGCTGCTCCTAAGTGGCAG CGGTCTGCGCCAGCATCTCGTCCAGGCCCTGATCCTCTCCAGCGACGGCT GGCAGCTTTCCGCCCTCACCAATGGCACTGTGCGTCACTACGATTTCTAT CGCGACAGAGAGTTACCCGTGGAGGAGCTCATGGACACACGCCTCAAGGT GACGGACATTGCCGGTGCTCGAAGTTGTGGACAGGAACAGGTTCTGCTCA TCCTGGACTCGACTGGAAAGGTGCAGTCGCGCACTCTGGACTACTAGCTT GTTAAATATTTTCTAATTATTTGTATGCGTTTGTTGAAATCATTTTTTAA AATGAAGTAAACTCGAACTAGTCCTACTCACTTTTAATCAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 12118100..12120199 | 128..2227 | 10500 | 100 | Plus |
chr2R | 21145070 | chr2R | 12120286..12121400 | 2225..3339 | 5560 | 99.9 | Plus |
chr2R | 21145070 | chr2R | 12117541..12117667 | 3..129 | 635 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 16230778..16232877 | 128..2227 | 10500 | 100 | Plus |
2R | 25286936 | 2R | 16232964..16234080 | 2225..3341 | 5570 | 99.9 | Plus |
2R | 25286936 | 2R | 16230219..16230345 | 3..129 | 635 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16231977..16234076 | 128..2227 | 10500 | 100 | Plus |
2R | 25260384 | 2R | 16234163..16235279 | 2225..3341 | 5570 | 99.9 | Plus |
2R | 25260384 | 2R | 16231418..16231544 | 3..129 | 635 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 750..816 | 966..1030 | 132 | 68.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12117539..12117665 | 1..127 | 99 | -> | Plus |
chr2R | 12118100..12120199 | 128..2227 | 100 | -> | Plus |
chr2R | 12120289..12121400 | 2228..3339 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15701-RA | 1..3156 | 92..3247 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15701-RA | 1..3156 | 92..3247 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15701-RA | 1..3156 | 92..3247 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15701-RA | 1..3156 | 92..3247 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15701-RA | 1..3156 | 92..3247 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15701-RA | 1..3339 | 1..3339 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15701-RA | 1..3339 | 1..3339 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15701-RA | 20..3358 | 1..3339 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15701-RA | 1..3339 | 1..3339 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15701-RA | 20..3358 | 1..3339 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16230778..16232877 | 128..2227 | 100 | -> | Plus |
2R | 16230217..16230343 | 1..127 | 99 | -> | Plus |
2R | 16232967..16234078 | 2228..3339 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16230778..16232877 | 128..2227 | 100 | -> | Plus |
2R | 16230217..16230343 | 1..127 | 99 | -> | Plus |
2R | 16232967..16234078 | 2228..3339 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16230778..16232877 | 128..2227 | 100 | -> | Plus |
2R | 16230217..16230343 | 1..127 | 99 | -> | Plus |
2R | 16232967..16234078 | 2228..3339 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12117722..12117848 | 1..127 | 99 | -> | Plus |
arm_2R | 12118283..12120382 | 128..2227 | 100 | -> | Plus |
arm_2R | 12120472..12121583 | 2228..3339 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16231977..16234076 | 128..2227 | 100 | -> | Plus |
2R | 16234166..16235277 | 2228..3339 | 99 | Plus | |
2R | 16231416..16231542 | 1..127 | 99 | -> | Plus |
Translation from 91 to 3246
> RE36115.pep MSKNAGRTSSKNVKTEVPRKVTKSPATSGPATTRESKERRSLAKQPDSLE GEKIARKTTTAAQPTTASKKPLATGKNKERESLSKRTTPSPGALRATTRH TTTTTNPPLQSKTTKTTKLVAKSKPNAVLDTYHSVTVASPPQKRRGQAEQ EKESPTPSSKEYSPVAQTQKEHKPQSPSKGDARIVPARSRTYTRTLDPEE VVILKRESAKQRSEVEAKESEPVKQPVAFEVKFDEAKKPEPESDHYSDDF ESYESDFETDASTPDEVESDEAQEPSSSEAEVEEEREEEDSEPTQNPITV IQRDKDQERKLDSGHYDMHLRRNPLSSLSTQNQYDSFDTNSMANSEQLDS GISTTGVEKPRSGEANVYYGGYSGFVSHPVISRRGEELMAKLRFDQLNYH LFEMKPLSYEGFMQSYGKLNASQVATQTQSPHMDGECQTLEVHSRSSWTQ HPPHYGGQFVLSCSVDAELDETWSKQPADEYEASISRLEQLHRLEQARSQ QLQQKRLAKSTDLERLNSFLHRAGRLMGLVLEGKTTAHGQGNSPRNVPLQ TGLLNALPVRRIFGSAGNGQLVVTVHECPADSNVYKEDFASLLMVWSLAN PSQPLRLLSTWAEVSRVALSAQAQDIVVAGLRDGSVAMWDLRETHSYCSK LDGHLTHFAATQSVVPMPEQQDKEVNAMDLGAVVDVRSFRSHLNAGGVAA TSGLQTTYKEVQYASLNDSGLLTMWTLVEGASSTNSNEFSSPWARVKLLQ SGSCDLRSYLERRLLKSHQSAYEKTKSLFQGNIYSDDVLRELNDTQTLTT ALQGQGLQGLRFTSIDTGSELIYVCTNRNFVLCCTRSLKTERFARIAVNE SRFLFPTSLCVLSNENYVAVGLSNGSVMILNCNQRQRQRQRNQQRPKTGL PPATDEPDPETGKSCAIQNIILNERRSFDQQMDDNPTYDARPNTALELIE RPRRSYEMRVFDQQLLLSGSGLRQHLVQALILSSDGWQLSALTNGTVRHY DFYRDRELPVEELMDTRLKVTDIAGARSCGQEQVLLILDSTGKVQSRTLD Y*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12274-PA | 1032 | GF12274-PA | 1..1032 | 1..1051 | 3834 | 72.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20583-PA | 1054 | GG20583-PA | 1..1054 | 1..1051 | 4870 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20843-PA | 1050 | GH20843-PA | 1..1049 | 1..1050 | 3039 | 60.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15701-PA | 1051 | CG15701-PA | 1..1051 | 1..1051 | 5395 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20948-PA | 1068 | GI20948-PA | 1..1067 | 1..1050 | 2969 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17671-PA | 1042 | GL17671-PA | 1..1041 | 1..1050 | 3528 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13899-PA | 1042 | GA13899-PA | 1..1041 | 1..1050 | 3524 | 66.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21674-PA | 1050 | GM21674-PA | 1..1050 | 1..1051 | 5052 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15432-PA | 120 | GD15432-PA | 1..120 | 932..1051 | 600 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20670-PA | 1048 | GJ20670-PA | 1..1047 | 1..1050 | 3063 | 60.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20629-PA | 986 | GK20629-PA | 2..980 | 42..1045 | 2711 | 56.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11769-PA | 1052 | GE11769-PA | 1..1052 | 1..1051 | 4762 | 91.5 | Plus |
Translation from 91 to 3246
> RE36115.hyp MSKNAGRTSSKNVKTEVPRKVTKSPATSGPATTRESKERRSLAKQPDSLE GEKIARKTTTAAQPTTASKKPLATGKNKERESLSKRTTPSPGALRATTRH TTTTTNPPLQSKTTKTTKLVAKSKPNAVLDTYHSVTVASPPQKRRGQAEQ EKESPTPSSKEYSPVAQTQKEHKPQSPSKGDARIVPARSRTYTRTLDPEE VVILKRESAKQRSEVEAKESEPVKQPVAFEVKFDEAKKPEPESDHYSDDF ESYESDFETDASTPDEVESDEAQEPSSSEAEVEEEREEEDSEPTQNPITV IQRDKDQERKLDSGHYDMHLRRNPLSSLSTQNQYDSFDTNSMANSEQLDS GISTTGVEKPRSGEANVYYGGYSGFVSHPVISRRGEELMAKLRFDQLNYH LFEMKPLSYEGFMQSYGKLNASQVATQTQSPHMDGECQTLEVHSRSSWTQ HPPHYGGQFVLSCSVDAELDETWSKQPADEYEASISRLEQLHRLEQARSQ QLQQKRLAKSTDLERLNSFLHRAGRLMGLVLEGKTTAHGQGNSPRNVPLQ TGLLNALPVRRIFGSAGNGQLVVTVHECPADSNVYKEDFASLLMVWSLAN PSQPLRLLSTWAEVSRVALSAQAQDIVVAGLRDGSVAMWDLRETHSYCSK LDGHLTHFAATQSVVPMPEQQDKEVNAMDLGAVVDVRSFRSHLNAGGVAA TSGLQTTYKEVQYASLNDSGLLTMWTLVEGASSTNSNEFSSPWARVKLLQ SGSCDLRSYLERRLLKSHQSAYEKTKSLFQGNIYSDDVLRELNDTQTLTT ALQGQGLQGLRFTSIDTGSELIYVCTNRNFVLCCTRSLKTERFARIAVNE SRFLFPTSLCVLSNENYVAVGLSNGSVMILNCNQRQRQRQRNQQRPKTGL PPATDEPDPETGKSCAIQNIILNERRSFDQQMDDNPTYDARPNTALELIE RPRRSYEMRVFDQQLLLSGSGLRQHLVQALILSSDGWQLSALTNGTVRHY DFYRDRELPVEELMDTRLKVTDIAGARSCGQEQVLLILDSTGKVQSRTLD Y*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15701-PA | 1051 | CG15701-PA | 1..1051 | 1..1051 | 5395 | 100 | Plus |